Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TPCN1 Gene 0 77.54 12.08 49.95 65.17 30.54 36.86 20.48 39.48 44.70 26.18 116.71 52.55 128.66 160.13 112.72 131.20 164.83 25.94 43.69 19.29 135.11 203.26 266.79 2 428632 Transcript 0 18.80 3.49 6.87 14.39 5.21 9.87 3.16 6.40 10.47 5.40 14.43 5.07 5.84 43.25 20.42 23.62 30.25 5.59 7.72 7.79 28.11 18.27 43.45 3 335509 Transcript 0 110.81 15.09 76.49 88.20 39.91 43.59 23.19 44.58 43.77 27.90 110.66 32.80 67.33 151.38 122.76 127.64 146.03 25.27 42.53 16.46 131.05 207.07 268.07 4 392569 Transcript 0 12.97 3.27 4.08 4.99 2.59 4.31 5.87 6.54 7.76 2.15 39.85 12.11 28.24 55.12 55.62 67.01 46.53 15.76 10.51 3.35 26.77 45.14 113.51 5 ER1a ExonRegion 0 2.41 0.60 0.18 0.36 0.79 0.15 0.80 0.72 0.24 0.47 6.59 1.79 4.58 8.53 7.96 3.18 5.99 0.06 0.94 1.72 9.29 9.73 6.97 6 E1a_E3a KnownJunction 0 2.89 0.00 1.66 3.46 0.00 2.56 0.00 6.57 4.34 5.78 27.85 6.30 5.68 25.08 4.45 10.60 21.13 0.00 0.00 5.82 22.98 19.47 21.68 7 E2_Aa NovelBoundary 0 19.56 0.00 3.28 28.17 6.96 0.00 25.75 34.13 12.96 17.65 6.26 11.85 0.00 0.00 0.00 8.46 16.74 27.69 3.76 22.12 5.56 6.25 26.55 8 ER2a ExonRegion 0 9.72 0.63 4.87 4.01 0.94 5.78 7.27 4.54 5.62 0.97 31.01 5.76 17.52 44.19 41.77 36.19 45.56 12.83 12.08 3.88 29.64 31.73 66.54 9 E2_Da NovelBoundary 0 20.52 11.77 27.05 26.30 26.06 5.11 18.99 33.39 22.45 21.30 9.58 7.20 6.33 4.83 0.00 27.69 17.77 29.27 31.15 22.05 9.20 8.45 20.57 10 E2a_E3a KnownJunction 0 16.23 5.92 3.28 5.96 4.24 2.84 4.46 8.54 9.90 3.33 48.70 18.46 38.96 66.04 69.47 97.84 47.50 18.70 8.94 2.81 23.91 58.54 160.48 11 ER3a ExonRegion 0 16.85 7.49 14.75 21.16 8.86 15.66 13.51 18.98 26.52 17.57 91.37 32.10 59.37 101.58 76.79 88.49 131.58 22.69 29.04 14.79 97.89 114.71 195.69 12 E3a_E4a KnownJunction 1 20.97 6.38 26.49 17.55 8.66 13.57 8.57 18.48 31.86 21.11 71.86 23.71 73.37 84.94 59.83 60.84 179.06 19.03 44.42 12.72 123.49 128.71 165.09 13 ER4a ExonRegion 0 65.51 6.21 24.45 26.48 17.27 23.74 8.64 14.70 35.59 23.24 111.89 41.74 70.91 133.81 109.13 103.88 166.68 26.98 38.76 19.57 110.82 179.95 221.68 14 E4a_E5a KnownJunction 0 148.17 16.05 18.89 33.63 58.57 34.07 8.44 8.67 59.46 31.56 144.35 70.67 111.52 126.49 123.25 199.43 255.35 32.71 74.17 21.03 134.98 253.75 345.72 15 ER5a ExonRegion 0 54.07 6.77 28.09 25.09 18.41 20.17 11.00 14.54 34.95 23.88 108.34 47.70 110.15 149.71 102.54 99.59 159.17 27.93 48.27 17.87 145.66 163.63 224.68 16 E5a_E6a KnownJunction 0 21.63 6.25 17.21 25.57 23.68 33.11 14.40 22.10 41.00 30.70 98.66 37.51 115.41 168.76 148.34 74.25 160.26 26.12 35.11 17.26 190.03 193.87 206.75 17 ER6a ExonRegion 0 22.48 2.84 27.26 22.32 24.20 28.20 14.12 27.67 39.87 20.91 109.06 51.65 134.57 160.32 107.14 94.30 155.03 27.67 45.99 16.83 149.37 166.79 225.71 18 E6_Da NovelBoundary 0 35.64 0.00 10.59 9.19 11.46 18.11 10.60 7.35 6.80 5.59 18.48 0.00 21.91 21.96 22.75 24.69 39.36 14.76 23.25 3.26 5.07 15.25 88.27 19 E6a_E7a KnownJunction 0 23.12 2.63 21.91 26.10 7.64 21.07 8.13 32.74 52.63 26.32 117.24 114.04 205.67 189.30 71.20 161.50 156.71 26.32 34.64 20.45 114.23 176.78 264.45 20 E7_Aa NovelBoundary 0 13.19 0.00 1.80 6.96 0.00 7.38 0.00 0.00 1.79 1.64 4.42 0.00 19.97 20.01 8.90 4.19 29.45 2.11 17.32 5.69 13.41 8.63 35.08 21 ER7a ExonRegion 0 27.89 2.10 22.79 48.40 11.64 14.70 10.96 26.65 45.90 33.95 124.96 90.49 209.23 195.19 134.12 109.11 216.42 24.05 62.03 31.04 148.22 243.85 291.76 22 E7a_E8a KnownJunction 1 26.15 3.35 22.21 47.25 8.23 23.74 6.36 32.16 60.76 26.84 107.97 51.17 237.00 151.51 110.27 79.21 202.43 37.23 17.69 28.83 72.77 190.80 205.47 23 I7_SR1 SilentIntronRegion 0 17.23 0.00 6.48 7.01 0.00 0.00 0.00 6.67 7.76 2.13 4.14 4.33 12.73 13.69 5.80 23.35 16.03 3.70 3.19 0.00 11.65 6.25 36.50 24 I7_AR4 ActiveIntronRegion 0 2.60 0.00 13.57 3.56 9.06 0.00 6.62 7.45 7.70 2.29 4.01 1.00 18.40 22.74 7.14 22.63 26.66 7.39 12.99 2.13 3.39 7.69 22.36 25 I7_AR5 ActiveIntronRegion 0 9.31 0.00 11.03 4.09 10.70 1.22 6.80 8.64 5.93 2.29 6.83 1.15 14.07 14.94 10.83 19.81 24.43 7.39 15.93 2.13 3.97 8.33 22.32 26 ER8a ExonRegion 0 67.73 6.88 32.20 59.51 16.14 33.87 18.82 48.67 72.86 41.29 177.35 84.89 287.09 230.97 118.85 221.24 304.76 42.79 55.90 35.45 178.82 278.84 362.00 27 E8a_E9a KnownJunction 0 226.93 31.51 50.38 107.61 57.47 73.82 49.77 56.23 72.77 43.44 275.44 203.77 465.88 337.81 205.08 398.87 491.82 41.54 166.88 60.02 288.01 466.91 700.58 28 ER9a ExonRegion 1 127.35 21.79 33.37 89.29 29.36 50.82 28.33 51.61 62.14 32.83 218.86 165.63 481.47 284.27 204.41 243.97 326.13 33.00 107.67 38.60 210.36 324.61 475.48 29 E9a_E10a KnownJunction 1 116.24 14.80 14.31 56.44 20.37 38.44 18.28 31.18 43.17 19.58 151.46 120.34 402.57 211.55 101.86 107.66 195.42 17.74 40.57 17.39 130.23 230.36 243.20 30 ER10a ExonRegion 1 87.67 20.37 38.36 80.78 35.37 42.61 20.56 55.37 74.40 30.38 153.09 125.48 396.03 194.62 168.42 140.09 301.22 17.13 61.22 25.24 172.52 298.97 322.63 31 E10a_E11a KnownJunction 1 75.42 39.86 52.13 90.36 43.21 42.93 45.84 74.47 93.81 35.78 214.26 155.00 427.89 213.55 143.64 145.43 407.57 32.91 56.75 41.35 208.81 340.40 424.94 32 ER11a ExonRegion 1 40.38 18.95 31.70 87.76 41.45 39.30 36.36 54.50 65.07 34.49 190.35 126.51 402.59 238.71 113.09 147.71 305.86 28.10 48.93 30.55 228.02 233.85 354.83 33 E11a_E12a KnownJunction 1 60.08 23.48 45.09 107.68 48.05 43.33 55.16 77.92 70.31 30.54 153.88 193.56 554.35 226.68 112.62 252.50 258.72 48.21 112.10 28.19 196.70 293.74 515.76 34 ER12a ExonRegion 1 43.02 12.31 29.95 84.77 25.68 43.43 38.59 61.29 61.57 31.83 171.58 143.28 442.71 228.20 148.26 208.56 267.97 28.54 88.75 31.93 191.69 321.43 351.77 35 E12a_E13a KnownJunction 1 28.45 8.81 23.80 43.92 3.82 14.99 14.88 26.70 36.89 14.37 76.91 59.57 232.61 113.43 99.51 72.12 126.98 12.19 36.14 26.97 109.28 139.24 160.06 36 ER13a ExonRegion 1 83.85 22.78 29.24 62.55 39.37 41.75 32.41 55.63 52.44 25.40 160.34 137.95 335.69 245.89 111.62 215.21 237.00 37.62 85.75 28.54 182.59 296.58 422.15 37 E13a_E14a KnownJunction 0 50.45 11.38 21.61 45.91 50.17 37.19 21.33 39.97 41.90 23.48 151.41 75.02 279.04 220.38 97.41 171.24 168.12 31.21 26.35 29.21 155.31 258.53 294.08 38 ER14a ExonRegion 0 58.14 19.84 29.08 52.32 48.38 45.13 45.23 40.28 55.28 28.09 147.18 104.35 295.18 187.83 85.20 189.43 224.26 41.07 42.97 30.66 153.63 216.64 311.22 39 E14a_E15a KnownJunction 1 76.46 24.47 35.10 52.04 57.47 88.30 59.00 44.03 55.50 32.29 121.82 120.19 345.27 180.76 124.11 185.25 237.59 40.83 59.11 30.36 125.10 272.92 311.49 40 ER15a ExonRegion 1 44.45 13.79 23.91 43.76 31.77 67.05 36.31 27.93 43.96 21.18 138.53 116.29 396.53 201.11 91.43 186.83 215.28 34.65 65.75 23.47 152.09 234.72 329.91 41 E15a_E16a KnownJunction 1 37.34 7.83 20.96 38.89 19.19 54.80 29.15 13.60 35.99 10.26 114.82 111.79 408.41 237.98 77.76 214.05 180.74 20.19 53.84 35.22 196.27 217.26 378.50 42 E15a_E17a NovelJunction 1 0.00 0.00 0.00 5.39 0.00 2.33 0.00 5.09 0.00 0.00 0.00 6.15 27.92 0.00 5.19 0.00 8.42 0.00 0.00 0.00 3.15 2.94 0.00 43 ER16a ExonRegion 1 23.14 3.25 15.49 40.01 29.37 40.14 24.36 19.74 48.58 19.01 154.46 109.29 307.04 207.92 59.12 184.34 203.04 24.35 37.80 29.69 190.45 256.60 372.17 44 E16_Da NovelBoundary 1 13.63 6.12 10.26 30.23 11.04 2.73 10.47 2.55 14.55 12.28 26.74 65.87 154.21 66.40 24.11 63.15 99.77 7.30 4.80 3.00 25.82 63.07 125.31 45 E16a_E17a KnownJunction 0 31.12 6.12 18.66 44.82 42.87 38.50 16.65 25.55 55.27 27.53 160.25 67.22 217.03 213.37 72.81 170.64 221.13 29.35 29.46 20.77 147.40 245.06 330.18 46 I16 Intron 0 19.36 6.66 3.88 7.43 13.32 3.67 6.42 4.93 7.44 3.85 18.42 39.18 94.40 20.87 15.67 27.30 33.84 2.58 5.69 3.17 11.34 24.90 36.60 47 I16_AR1 ActiveIntronRegion 1 8.13 1.00 7.88 13.56 8.89 6.93 3.85 4.29 6.83 4.60 15.74 47.88 129.13 25.75 9.83 35.74 51.44 4.13 6.72 5.95 26.44 16.95 38.75 48 I16_SR1 SilentIntronRegion 0 20.62 7.29 3.45 6.77 13.83 3.32 6.71 5.01 7.52 3.78 18.75 38.30 90.77 20.37 16.33 26.43 31.97 2.41 5.59 2.87 9.71 25.82 36.43 49 E17_Aa NovelBoundary 1 32.15 8.49 6.83 13.95 14.69 15.45 5.74 8.50 21.90 4.62 43.70 37.81 115.58 32.20 15.08 60.50 40.11 3.48 3.67 5.62 38.30 22.72 72.81 50 ER17a ExonRegion 0 44.82 9.31 19.22 52.44 26.48 22.39 19.14 25.93 47.84 35.57 145.31 90.01 244.21 190.42 87.95 162.37 201.47 30.47 28.78 20.12 144.25 263.84 304.28 51 E17a_E18a KnownJunction 0 63.86 9.54 18.21 66.79 30.48 25.44 13.65 28.05 38.31 40.05 187.78 111.64 330.66 166.58 103.59 164.57 232.35 33.91 66.73 40.27 172.17 306.96 384.22 52 E17a_E19a NovelJunction 0 7.33 0.00 0.00 0.00 8.66 0.00 1.99 4.48 0.00 4.27 9.95 0.00 0.00 9.65 4.45 3.76 3.55 0.00 17.69 0.00 36.88 28.41 72.73 53 ER18a ExonRegion 0 43.04 12.28 29.16 46.59 34.49 29.71 16.40 25.22 41.70 26.00 158.25 126.60 244.32 184.07 105.79 166.22 227.95 30.97 52.44 26.24 184.25 239.26 315.09 54 E18_Da NovelBoundary 0 18.89 0.00 3.67 15.02 0.00 2.16 12.28 6.78 15.25 2.93 19.74 0.00 26.62 11.89 9.64 36.32 29.45 0.00 8.66 3.26 10.93 23.09 31.58 55 E18a_E19a KnownJunction 0 59.12 5.66 47.19 26.70 35.82 39.07 12.19 28.09 50.17 16.14 154.62 112.84 181.48 186.24 122.38 144.06 180.64 34.20 70.12 27.87 159.76 202.19 232.02 56 ER19a ExonRegion 0 53.26 5.43 34.31 30.00 16.82 44.01 23.47 30.50 52.38 30.73 140.73 104.03 193.83 194.25 78.53 154.10 190.46 27.94 47.52 23.87 169.87 236.81 287.83 57 E19a_E20a KnownJunction 0 68.31 8.95 26.76 50.21 10.78 72.06 22.26 32.74 62.73 52.65 184.73 88.98 143.01 157.81 65.64 179.27 213.74 34.70 28.33 21.92 218.88 263.37 356.22 58 ER20a ExonRegion 0 49.56 13.24 23.67 46.31 19.62 49.38 13.08 27.22 45.65 31.93 130.27 62.66 154.73 171.80 90.34 170.02 161.81 33.02 41.17 24.61 157.03 226.68 323.14 59 E20_Da NovelBoundary 0 16.52 0.00 15.55 9.79 4.33 0.00 4.28 1.68 4.48 1.29 7.58 13.35 28.57 19.07 14.09 44.35 41.51 13.27 4.80 0.00 5.56 8.70 10.67 60 E20a_E21a KnownJunction 0 36.08 18.22 26.43 42.22 24.36 53.44 11.61 32.04 40.97 21.36 66.07 96.93 120.93 152.57 132.89 100.40 96.68 18.78 38.68 15.08 138.88 159.27 254.98 61 I20_AR1 ActiveIntronRegion 0 5.99 2.32 8.69 14.02 1.70 1.27 2.77 4.29 4.28 3.34 21.39 8.80 15.25 31.58 27.52 38.03 47.70 10.94 8.39 8.66 14.45 13.09 42.45 62 ER21a ExonRegion 0 41.74 12.00 29.83 43.73 17.28 48.26 17.58 26.62 42.99 23.34 112.16 53.64 82.40 151.29 114.56 122.77 160.64 20.50 31.15 16.61 155.85 210.12 253.98 63 E21_Da KnownBoundary 0 50.38 6.51 17.68 33.36 16.81 19.08 6.45 25.88 17.85 9.13 26.59 18.76 12.66 39.08 23.36 22.22 44.41 9.78 13.74 5.62 37.25 22.72 68.21 64 E21a_E22a KnownJunction 0 6.59 6.58 13.75 16.78 0.00 26.58 6.23 10.64 18.72 13.59 107.66 24.91 82.95 71.93 32.88 57.34 95.65 16.33 13.84 6.52 116.70 176.72 190.62 65 ER21b ExonRegion 0 18.80 3.49 6.87 14.39 5.21 9.87 3.16 6.40 10.47 5.40 14.43 5.07 5.84 43.25 20.42 23.62 30.25 5.59 7.72 7.79 28.11 18.27 43.45 66 E21_Db NovelBoundary 0 27.12 0.00 34.68 44.88 7.89 17.89 14.57 15.81 23.38 19.90 44.38 12.60 21.26 67.40 48.71 104.25 53.02 23.84 21.84 6.01 22.67 55.05 89.03 67 I21 Intron 1 30.64 4.68 10.21 17.37 6.16 11.46 6.10 8.05 14.23 9.84 31.48 6.58 17.79 53.77 34.70 44.50 46.16 10.42 11.00 8.05 30.82 36.33 61.84 68 I21_AR1 ActiveIntronRegion 1 30.84 4.71 10.27 17.48 6.20 11.54 6.14 8.09 14.32 9.91 31.68 6.62 17.91 54.11 34.93 44.77 46.45 10.49 11.08 8.10 31.00 36.57 62.19 69 E22_Aa NovelBoundary 0 26.67 6.05 11.71 24.47 7.64 7.55 7.86 7.39 20.34 21.19 35.69 0.00 13.64 77.29 49.20 64.09 68.82 8.42 43.48 16.23 36.63 60.38 62.49 70 ER22a ExonRegion 0 47.01 4.77 25.34 41.52 23.84 32.70 19.77 38.70 42.38 19.89 122.89 40.46 84.84 187.42 114.28 162.05 168.13 39.34 41.87 24.99 127.06 224.51 333.90 71 E22a_E23a KnownJunction 0 51.71 6.25 41.90 79.48 39.64 31.97 19.12 77.79 72.48 25.44 135.67 47.27 98.69 212.08 189.01 198.41 161.01 49.87 69.27 38.86 136.84 288.29 308.33 72 ER23a ExonRegion 0 71.34 9.40 44.90 67.56 37.46 46.81 17.94 65.55 75.96 34.56 178.68 60.58 164.31 224.79 159.12 159.96 242.53 35.70 50.61 35.69 162.52 274.02 310.40 73 E23a_E24a KnownJunction 0 132.25 15.52 29.69 69.85 82.26 57.52 30.69 62.84 74.45 36.16 210.05 100.68 178.72 249.99 146.73 214.39 362.69 22.14 58.26 37.97 217.33 284.49 355.45 74 ER24a ExonRegion 0 107.99 11.25 43.88 83.54 51.86 68.20 35.63 83.22 83.94 36.51 212.54 84.19 225.52 255.02 134.69 238.40 288.51 45.80 80.92 42.64 203.07 290.58 433.31 75 E24a_E25a KnownJunction 0 167.44 19.47 53.75 88.93 63.75 62.75 26.94 75.78 80.70 31.11 191.73 103.68 238.30 274.53 187.53 348.88 252.92 46.51 106.07 41.48 209.18 402.92 576.97 76 ER25a ExonRegion 0 79.11 11.73 26.53 54.61 37.31 43.93 19.19 48.30 57.78 21.94 135.33 96.88 138.93 184.35 144.77 175.48 202.50 31.68 45.29 24.55 167.16 214.12 292.05 77 E25a_E26a KnownJunction 0 101.28 20.92 20.11 68.59 60.53 80.64 17.31 77.22 80.00 30.03 208.37 102.18 152.91 228.33 156.50 179.87 240.67 50.74 61.84 58.10 196.27 200.23 281.70 78 ER26a ExonRegion 0 81.65 16.89 24.28 65.03 34.28 57.56 22.09 65.34 62.74 28.54 142.19 60.77 184.95 208.19 123.29 160.81 174.71 26.41 54.79 30.29 178.24 270.93 260.70 79 E26_Da NovelBoundary 0 40.60 24.93 4.41 28.10 11.63 22.88 29.41 19.47 25.09 14.85 26.90 12.60 61.03 56.63 28.43 37.94 49.93 12.27 26.26 20.84 42.63 43.35 79.56 80 E26a_E27a KnownJunction 0 50.60 4.93 33.50 43.02 23.85 15.45 8.13 39.06 42.91 12.60 141.40 79.53 125.97 160.52 110.39 119.71 163.07 9.62 24.28 17.19 184.22 192.89 257.63 81 I26 Intron 0 35.57 5.49 17.73 29.32 15.82 19.36 7.71 15.44 13.99 9.81 26.11 22.07 41.46 32.11 30.84 43.42 33.45 14.81 21.52 8.98 19.14 46.44 65.96 82 I26_AR1 ActiveIntronRegion 0 35.69 5.51 17.79 29.42 15.87 19.42 7.74 15.49 14.03 9.85 26.19 22.14 41.59 32.22 30.94 43.55 33.55 14.86 21.59 9.01 19.21 46.60 66.16 83 E27_Aa NovelBoundary 0 38.90 9.41 34.18 36.23 18.34 18.85 8.92 24.11 25.58 18.24 24.48 0.00 32.14 51.21 45.74 50.24 39.18 11.77 26.54 6.01 14.27 45.19 71.96 84 ER27a ExonRegion 0 60.11 6.52 64.85 80.35 34.96 31.82 26.31 61.59 59.77 33.14 159.53 90.86 201.24 204.72 154.89 187.65 195.96 35.32 48.99 21.34 169.78 259.25 360.83 85 E27a_E28a KnownJunction 0 82.01 16.44 67.32 82.57 50.42 34.98 34.05 75.66 74.42 43.30 160.88 61.97 200.47 260.46 204.34 206.36 205.33 35.61 65.98 24.80 196.82 291.23 353.06 86 ER28a ExonRegion 0 90.91 10.54 54.66 69.47 33.40 35.79 15.17 74.79 68.79 43.07 132.18 47.68 184.42 230.89 141.73 172.60 213.21 31.57 42.20 16.89 171.78 222.50 335.57 87 E28a_E29a KnownJunction 0 92.76 25.26 96.86 95.36 19.61 31.52 13.69 60.05 73.29 47.60 127.40 74.72 126.29 176.41 131.65 137.14 249.09 43.03 29.74 5.75 126.64 210.46 276.75 88 ER29a ExonRegion 0 102.41 21.36 62.55 77.41 28.29 38.85 19.92 49.89 64.84 31.93 118.31 56.82 179.72 198.56 142.40 145.81 193.60 24.50 42.43 16.73 135.31 238.70 304.09 89 E29_Da KnownBoundary 0 133.58 17.23 75.13 92.66 52.21 101.53 24.95 62.64 78.59 34.33 163.62 96.63 179.70 201.25 122.88 183.20 158.39 17.87 44.52 21.03 106.50 228.89 310.47 90 ER29b ExonRegion 0 110.81 15.09 76.49 88.20 39.91 43.59 23.19 44.58 43.77 27.90 110.66 32.80 67.33 151.38 122.76 127.64 146.03 25.27 42.53 16.46 131.05 207.07 268.07