Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	SNRNP35	Gene	0	119.78	91.51	77.46	106.46	109.87	136.14	103.63	77.02	45.38	65.76	59.20	63.26	50.39	93.43	114.20	95.51	73.64	91.41	59.07	82.31	47.94	41.42	47.14
2	438124	Transcript	0	1.45	0.93	0.45	0.91	1.82	1.67	2.11	1.17	0.00	0.39	0.00	0.89	1.70	2.13	5.08	5.41	1.50	0.00	0.00	1.45	0.50	0.00	2.67
3	350887	Transcript	0	119.46	72.03	41.48	52.43	82.75	196.58	100.91	35.34	13.74	26.59	56.88	7.69	17.35	73.10	142.72	123.82	53.96	100.58	73.17	55.90	27.30	31.93	66.48
4	392420	Transcript	0	14.14	24.24	8.36	14.47	28.66	36.54	29.29	15.96	8.84	13.74	5.25	5.92	5.95	8.65	5.74	15.65	6.54	19.15	12.43	12.72	5.91	2.01	5.88
5	412157	Transcript	1	28.01	24.14	7.48	10.90	33.89	22.15	44.06	12.42	9.53	12.04	6.52	28.29	24.99	16.71	23.67	27.23	20.60	18.29	20.32	31.70	9.69	9.05	22.63
6	361485	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER1a	ExonRegion	0	2.89	1.85	0.90	1.81	3.63	3.34	4.22	2.35	0.00	0.78	0.00	1.78	3.39	4.26	10.15	10.83	3.01	0.00	0.00	2.91	1.00	0.00	5.35
8	E1_Da	NovelBoundary	0	73.57	100.57	287.01	348.41	69.95	53.32	92.43	298.07	270.86	236.71	17.53	12.75	0.00	2.35	22.00	84.08	44.97	350.86	96.94	76.64	50.47	38.03	88.52
9	E1a_E5d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	Ix	Intron	0	7.77	2.98	4.69	2.98	2.95	0.67	6.80	3.78	4.05	2.51	4.26	3.92	5.47	6.73	10.96	20.72	9.69	1.01	0.00	4.68	4.04	1.53	2.15
11	Ix_AR1	ActiveIntronRegion	0	7.82	2.99	4.72	3.00	2.97	0.68	6.85	3.81	4.08	2.53	4.29	3.95	5.51	6.78	11.02	20.87	9.76	1.02	0.00	4.72	4.07	1.54	2.17
12	I1	Intron	0	5.97	0.76	4.12	2.86	4.91	2.15	2.92	2.42	3.63	1.12	18.63	20.43	14.01	28.78	38.49	26.12	12.10	0.73	1.95	1.60	4.45	10.19	10.63
13	I1_SR1	SilentIntronRegion	0	5.97	0.77	4.12	2.87	4.91	2.16	2.93	2.42	3.64	1.13	18.64	20.45	14.02	28.80	38.52	26.15	12.11	0.73	1.95	1.60	4.46	10.19	10.64
14	I1_AR1	ActiveIntronRegion	1	6.23	0.75	7.99	1.55	6.40	11.15	2.68	1.42	2.68	0.94	26.66	3.42	3.69	51.47	46.62	48.69	37.75	1.13	3.51	1.57	6.90	9.97	15.13
15	ER2a	ExonRegion	0	15.69	2.57	1.30	1.68	3.62	9.01	2.69	0.81	0.54	2.13	5.63	4.58	1.10	12.95	23.12	8.22	5.34	1.20	5.15	2.50	7.58	3.74	4.32
16	E2_Ab	KnownBoundary	0	44.82	2.83	1.45	4.13	7.98	15.05	5.70	3.94	1.79	2.55	14.79	5.70	6.17	34.08	22.99	12.73	13.56	12.81	8.19	5.24	8.65	6.25	7.51
17	ER2b	ExonRegion	1	180.79	117.61	57.65	68.40	137.55	389.23	202.31	56.60	23.81	48.92	90.28	5.43	8.43	100.61	183.70	148.98	119.96	147.38	91.17	118.45	92.70	55.02	75.09
18	E2a_E3a	KnownJunction	0	47.12	55.71	17.36	15.72	79.29	121.01	85.32	24.36	15.36	22.81	15.37	0.00	5.84	14.48	11.62	28.37	8.98	52.48	31.44	32.73	20.32	3.12	14.77
19	E2a_E7a	KnownJunction	1	223.22	141.49	81.66	103.18	161.88	384.15	199.13	69.87	26.94	51.06	108.13	10.80	33.60	133.26	262.32	239.42	102.57	199.97	141.18	109.30	47.01	60.13	128.64
20	ER3a	ExonRegion	0	15.90	30.45	8.56	11.09	23.36	42.82	33.08	10.60	13.92	17.89	6.79	7.90	11.73	12.16	11.49	16.55	18.07	34.66	15.32	22.23	8.19	3.66	10.48
21	E3_Da	NovelBoundary	0	3.26	26.18	9.05	13.58	3.90	0.00	5.79	12.12	5.32	14.16	11.90	12.60	12.99	5.06	6.30	15.72	33.75	15.63	4.42	15.92	26.07	0.00	0.00
22	E3a_E4a	KnownJunction	0	0.00	0.00	1.66	1.80	0.00	0.00	0.00	6.82	4.80	5.94	0.00	0.00	0.00	0.00	0.00	3.33	0.00	13.64	0.00	0.00	0.00	0.00	0.00
23	E4_Aa	NovelBoundary	1	31.93	59.27	178.32	169.14	129.37	110.67	113.98	192.92	163.31	149.57	7.53	13.20	0.00	5.24	30.04	70.41	16.64	258.38	54.97	46.53	28.73	8.63	64.88
24	ER4a	ExonRegion	1	21.84	59.26	22.57	56.15	69.33	55.42	57.35	49.03	18.96	35.82	9.32	27.60	18.13	25.29	11.36	45.65	12.19	14.13	27.81	21.34	6.92	5.27	10.05
25	E4_Da	NovelBoundary	0	171.44	245.81	51.33	73.82	170.03	210.22	296.46	61.04	64.47	54.77	97.76	141.50	103.89	64.10	92.59	237.63	158.39	125.15	180.05	305.84	126.40	116.96	237.31
26	E4a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E5_Aa	NovelBoundary	1	511.42	471.43	567.07	595.96	351.44	368.59	446.22	594.88	520.37	464.60	126.03	135.94	114.28	62.51	228.82	329.83	409.35	384.89	171.96	588.61	173.22	129.88	374.49
28	E5_Ab	NovelBoundary	1	868.67	823.54	723.07	768.67	607.56	548.77	870.01	764.14	689.06	629.05	284.65	502.96	587.14	335.40	375.43	925.14	536.42	1099.84	784.78	1511.96	502.06	267.16	1133.45
29	ER5a	ExonRegion	0	0.16	3.60	0.00	2.62	0.41	0.56	1.83	1.20	0.86	0.44	0.00	4.66	10.10	3.00	4.02	0.46	0.00	0.00	0.00	1.47	0.00	0.16	0.00
30	ER5b	ExonRegion	1	7.82	12.20	3.64	10.18	21.63	20.99	29.49	6.29	4.97	4.24	1.99	24.53	12.38	13.22	15.96	8.75	11.46	7.08	0.44	7.98	0.67	3.59	3.26
31	E5_Da	KnownBoundary	1	66.38	46.44	14.81	41.05	91.77	81.26	128.29	16.55	17.79	10.37	17.48	71.27	18.99	56.15	37.95	48.53	37.31	39.42	23.53	31.06	7.48	15.06	34.91
32	E5a_E5c	KnownJunction	0	0.00	0.00	0.00	2.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER5c	ExonRegion	1	55.86	44.69	14.96	19.19	67.37	43.74	86.28	23.64	18.21	23.64	13.03	51.92	39.89	30.43	43.32	54.01	41.19	36.58	40.65	61.92	19.38	17.93	45.25
34	E5_Ac	KnownBoundary	0	0.00	0.00	3407.24	3350.52	0.00	0.00	0.00	3901.38	3677.19	3309.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4804.45	0.00	0.00	0.00	0.00	0.00
35	E5_Ad	KnownBoundary	1	1137.91	754.27	4872.74	5103.11	684.72	474.95	899.82	5387.11	5357.82	4659.58	265.33	67.52	97.07	77.11	167.25	740.15	702.29	7632.89	584.11	963.30	426.14	293.00	744.11
36	ER5d	ExonRegion	0	149.57	131.50	27.37	35.89	123.98	88.02	188.89	31.11	33.35	46.26	54.12	72.16	65.66	30.32	53.19	185.26	128.73	64.67	136.97	216.31	60.23	64.59	161.52
37	ER5e	ExonRegion	1	45.10	34.90	29.08	52.71	74.14	54.49	56.64	35.27	17.62	44.34	22.78	42.99	43.98	30.84	37.18	49.62	47.84	30.37	41.76	57.95	21.03	17.02	39.21
38	E5_Db	NovelBoundary	1	13.41	24.86	28.77	38.79	65.53	66.21	71.72	19.47	23.03	26.43	7.74	49.97	40.58	14.01	18.17	24.52	27.49	17.58	13.74	35.09	0.00	3.06	15.79
39	E5b_E7a	KnownJunction	0	7.04	3.35	4.52	32.43	39.73	54.00	39.08	17.33	11.08	17.00	5.21	18.76	6.82	9.71	19.66	15.72	4.77	12.64	16.38	9.59	8.40	0.00	0.00
40	I5	Intron	0	36.52	59.78	23.00	38.12	49.22	18.05	41.83	35.90	23.00	27.11	11.59	32.31	19.37	24.12	20.72	31.88	20.12	21.85	19.50	31.49	8.53	6.96	12.55
41	I5_SR1	SilentIntronRegion	0	23.78	47.72	22.27	33.83	42.37	16.75	38.81	31.14	19.96	22.25	11.31	28.38	18.63	22.36	18.26	28.72	18.13	22.05	18.75	30.12	8.41	5.43	12.25
42	I5_AR1	ActiveIntronRegion	0	67.84	89.51	24.87	48.77	66.15	21.30	49.37	47.69	30.54	39.11	12.32	42.05	21.25	28.50	26.81	39.71	25.07	21.44	21.41	34.93	8.85	10.73	13.34
43	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	I6	Intron	0	42.81	28.16	13.66	28.12	29.41	18.54	23.00	26.04	10.12	20.28	10.62	25.25	10.07	15.08	20.75	28.09	15.96	16.97	11.90	25.27	5.81	5.50	15.49
45	I6_AR1	ActiveIntronRegion	0	60.91	39.77	19.91	39.71	41.88	26.50	33.10	36.36	14.47	29.62	16.47	37.76	13.48	20.57	30.18	39.65	20.75	21.90	18.67	35.46	8.88	8.25	23.00
46	E7_Aa	NovelBoundary	0	108.02	34.80	40.51	44.88	32.09	24.36	34.09	60.09	36.66	37.71	7.48	11.85	19.97	23.72	23.49	49.99	28.24	46.43	31.62	33.75	14.39	7.90	27.40
47	ER7a	ExonRegion	0	203.38	144.29	138.71	181.97	165.37	206.07	149.64	127.85	78.36	106.18	103.23	103.22	80.31	162.76	196.99	148.25	117.77	155.70	88.85	127.76	79.63	71.74	69.84
48	ER7b	ExonRegion	0	14.82	2.03	0.00	10.90	5.35	11.00	7.94	5.19	3.71	2.29	3.87	4.33	0.00	6.50	8.70	5.94	3.30	1.85	0.00	8.51	0.00	6.25	0.00
49	ER7c	ExonRegion	0	6.35	0.51	0.00	5.45	2.01	5.96	4.63	3.02	1.54	0.00	0.97	3.25	0.00	2.03	2.90	0.00	0.00	0.46	0.00	2.66	0.00	2.60	0.00
50	IG45	Intergenic	0	10.52	19.56	18.77	28.60	40.30	22.00	33.17	16.34	14.45	11.38	1.33	7.86	4.26	1.97	5.53	3.93	3.23	9.93	11.78	15.80	4.83	8.37	10.17
51	IG45_SR1	SilentIntergenicRegion	0	5.03	18.54	9.19	21.44	56.07	30.67	33.45	15.81	12.86	7.22	1.17	8.49	10.19	2.88	9.09	3.34	5.64	6.37	5.04	14.98	0.63	1.86	8.38
52	IG45_AR1	ActiveIntergenicRegion	0	11.96	19.66	21.22	30.28	36.52	16.97	39.41	20.63	16.75	15.98	2.09	9.48	4.47	2.65	5.66	5.98	3.18	9.15	7.78	18.40	1.28	2.58	4.93
53	IG45_SR2	SilentIntergenicRegion	0	18.73	28.00	26.57	41.88	71.01	46.08	78.42	23.18	23.98	18.41	0.84	13.88	6.66	1.91	6.24	4.25	3.77	9.56	7.20	28.82	0.89	2.46	8.55
54	IG45_AR2	ActiveIntergenicRegion	0	10.99	18.24	19.40	39.32	24.96	21.47	29.87	19.55	10.03	8.26	0.00	7.65	2.01	1.39	4.84	3.71	3.44	10.55	11.03	13.84	4.25	7.42	3.56
55	IG45_SR3	SilentIntergenicRegion	0	3.44	11.53	4.94	5.91	20.96	11.95	14.64	1.05	3.46	1.91	0.37	1.42	0.05	0.90	2.91	2.25	1.25	3.58	10.79	5.06	1.69	6.68	7.24
56	IG45_AR3	ActiveIntergenicRegion	0	5.34	16.67	16.49	26.12	43.53	25.15	25.81	11.18	12.44	8.93	2.80	4.85	5.49	1.49	5.51	2.15	0.00	14.66	12.58	13.55	13.30	6.78	20.18
57	IG45_SR4	SilentIntergenicRegion	0	15.93	26.79	29.55	37.07	56.90	26.93	21.18	17.45	21.12	12.54	1.09	8.63	4.31	1.53	5.78	1.68	4.97	17.82	29.97	17.23	17.83	33.72	29.29