Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MLXIP Gene 0 112.80 76.40 197.03 104.61 110.40 200.91 131.60 194.84 232.05 196.44 108.08 34.56 80.95 110.33 95.30 98.94 64.39 173.56 66.32 106.89 131.29 98.46 104.50 2 319080 Transcript 0 88.16 52.86 177.79 94.29 78.34 176.26 113.13 211.06 248.97 221.27 144.65 53.59 148.47 135.72 115.64 104.83 83.22 187.51 79.74 124.63 154.46 106.40 116.38 3 377037 Transcript 0 14.52 10.82 17.06 17.66 16.57 35.97 23.29 24.00 19.79 21.05 5.14 2.93 7.23 6.50 11.02 9.50 9.69 14.89 8.87 4.72 14.63 7.96 15.44 4 IG20 Intergenic 0 2.79 5.45 27.54 18.03 11.44 8.45 16.85 11.48 9.18 9.87 0.10 0.83 0.38 0.09 0.22 1.02 0.24 2.49 1.47 3.05 4.00 1.03 1.22 5 IG20_AR2 ActiveIntergenicRegion 0 0.00 2.50 25.81 27.45 9.86 5.63 12.20 15.83 5.65 2.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.29 5.87 13.07 5.42 0.00 1.80 6 IG20_SR4 SilentIntergenicRegion 0 3.36 9.47 41.90 41.05 12.35 16.93 22.05 13.37 13.23 20.18 0.00 3.18 0.00 0.33 0.75 1.45 0.00 5.60 0.18 6.45 9.38 0.51 0.93 7 IG20_AR3 ActiveIntergenicRegion 0 2.80 12.51 44.72 43.65 12.51 18.35 25.57 19.60 15.88 18.58 0.00 2.34 0.00 0.00 0.00 1.97 0.00 4.46 1.09 6.18 5.38 0.92 1.56 8 IG20_AR8 ActiveIntergenicRegion 0 6.54 13.36 75.09 46.02 17.09 19.79 35.44 18.52 17.05 14.94 0.00 2.57 1.19 0.14 0.00 1.22 0.00 4.81 2.95 3.73 8.84 1.93 1.51 9 IG20_AR9 ActiveIntergenicRegion 0 4.36 10.53 46.60 28.80 30.54 11.17 31.85 22.17 15.95 17.99 0.25 0.23 0.50 0.00 0.00 0.00 0.00 2.12 0.41 2.60 4.90 2.63 1.65 10 IG20_SR7 SilentIntergenicRegion 0 3.52 3.86 29.43 9.75 9.41 8.23 13.94 15.28 13.67 13.45 0.25 0.71 0.00 0.06 0.09 0.25 0.28 2.66 1.09 1.99 5.78 1.19 2.28 11 ER1a ExonRegion 0 12.98 11.95 46.30 16.95 15.37 33.42 21.65 55.93 54.51 59.36 40.92 9.58 17.78 43.43 31.84 21.40 26.68 62.99 25.83 35.40 46.32 19.92 33.84 12 E1a_E2a KnownJunction 0 39.49 18.09 179.30 94.63 56.79 116.81 67.75 217.94 199.13 212.69 146.14 37.96 74.18 166.93 94.69 91.60 69.85 176.34 66.83 96.00 128.68 62.89 81.27 13 ER2a ExonRegion 0 67.25 50.65 186.70 87.31 59.82 99.81 93.56 231.34 250.28 259.69 167.87 60.61 96.43 167.82 103.88 96.02 70.21 198.69 81.84 132.65 165.55 102.68 102.76 14 E2a_E3a KnownJunction 1 132.10 29.60 188.55 101.42 80.14 157.64 133.11 257.08 276.88 261.72 156.14 18.91 105.84 211.43 53.53 140.56 49.09 193.79 132.80 118.06 169.21 124.98 171.84 15 ER3a ExonRegion 0 87.79 40.03 175.53 90.96 49.44 121.52 94.43 210.67 255.51 243.17 125.28 46.37 87.15 150.59 99.96 84.98 62.22 187.22 77.71 119.52 156.51 96.08 121.36 16 E3a_E4a KnownJunction 0 95.87 39.93 166.14 100.52 71.31 128.90 67.35 198.96 282.81 229.00 102.55 39.31 112.65 100.71 122.50 80.06 49.37 118.81 59.77 128.22 116.51 105.38 63.08 17 ER4a ExonRegion 0 124.00 94.00 174.29 99.64 67.28 175.88 157.18 247.80 294.57 249.21 174.80 69.66 139.09 152.54 122.59 121.26 83.51 193.42 85.47 151.58 196.96 152.51 129.15 18 E4a_E5a KnownJunction 1 143.73 144.25 177.85 93.86 83.28 303.63 201.16 282.55 284.37 262.66 226.64 43.21 230.34 197.95 117.44 148.17 136.23 221.11 120.76 173.09 209.05 168.21 129.67 19 ER5a ExonRegion 0 86.02 105.60 159.50 111.17 97.35 233.81 180.50 276.26 337.04 284.08 213.45 42.78 190.84 220.22 110.59 135.73 158.84 237.17 91.77 173.96 204.37 139.20 116.70 20 E5_Da NovelBoundary 1 35.64 12.76 26.08 18.28 15.79 10.85 12.76 26.12 30.90 43.62 2.68 7.65 13.47 10.24 0.00 40.67 4.68 19.48 0.00 20.84 20.57 12.19 36.71 21 E5a_E6a KnownJunction 0 99.94 97.55 141.57 115.10 149.41 234.01 229.91 234.61 323.78 255.43 200.52 55.67 189.60 197.89 121.76 109.12 156.24 185.38 78.78 183.63 214.74 104.10 121.90 22 E6_Aa NovelBoundary 0 62.01 5.92 30.48 20.98 10.87 22.71 24.20 37.83 30.67 22.05 6.58 0.00 13.64 9.36 9.64 37.17 3.83 17.53 0.00 28.44 17.17 5.02 21.60 23 ER6a ExonRegion 0 88.06 70.37 209.50 122.13 106.73 212.74 164.12 318.68 362.26 315.21 202.73 96.61 237.01 183.61 170.18 151.56 148.92 293.07 140.08 187.98 212.62 159.11 169.34 24 E6a_E7a KnownJunction 1 152.92 62.49 293.04 126.56 105.01 197.78 120.92 340.46 418.34 333.20 241.59 97.98 495.91 261.82 169.85 173.29 145.11 314.09 155.30 216.74 246.00 117.87 254.89 25 ER7a ExonRegion 0 104.67 76.03 250.79 139.15 80.39 187.37 147.81 372.37 422.86 343.78 311.20 131.42 348.37 216.69 220.82 208.71 150.85 301.33 157.22 200.05 264.59 180.41 235.16 26 E7_Da NovelBoundary 0 7.56 18.55 32.97 25.34 20.63 43.72 23.32 64.28 27.60 32.99 7.42 0.00 6.82 4.59 4.45 7.52 12.81 15.79 12.99 20.58 13.96 8.39 7.68 27 E7a_E8a KnownJunction 0 123.50 71.90 226.54 114.17 102.89 223.00 198.73 330.11 354.16 304.48 279.12 138.35 277.25 172.17 165.03 129.54 180.46 208.10 127.16 158.20 227.71 118.67 131.20 28 E7a_E9a NovelJunction 0 7.04 5.66 25.04 11.69 6.79 31.52 23.32 15.20 23.90 22.38 7.69 6.30 6.17 7.36 4.45 7.86 4.77 16.83 0.00 8.82 11.49 12.12 11.27 29 I7_AR1 ActiveIntronRegion 0 22.54 18.60 16.73 17.51 19.64 26.16 19.89 23.70 15.60 18.66 3.23 0.92 6.43 6.32 10.01 9.16 5.06 12.77 10.34 11.19 9.19 6.09 10.87 30 ER8a ExonRegion 0 163.73 99.25 248.38 123.68 98.68 205.23 161.28 296.02 366.44 294.21 269.26 133.27 353.49 192.78 168.68 159.40 136.09 308.88 133.30 183.07 210.02 121.39 136.30 31 E8a_E9a KnownJunction 1 217.08 64.26 259.16 124.23 71.82 177.97 133.15 288.30 428.67 333.38 267.44 126.34 388.61 179.53 228.07 199.01 133.05 364.42 155.86 174.37 152.59 161.17 231.50 32 I8 Intron 0 50.03 29.49 34.72 37.13 32.91 47.28 43.17 51.88 41.95 33.46 3.82 5.23 19.60 5.19 13.12 10.73 6.15 27.62 7.55 23.53 11.56 9.29 17.90 33 I8_SR1 SilentIntronRegion 0 30.19 18.71 19.61 17.85 25.27 30.51 26.11 24.53 27.37 18.48 1.68 2.97 5.39 1.64 5.14 4.63 2.40 16.76 4.85 14.83 5.41 5.31 10.91 34 I8_AR1 ActiveIntronRegion 0 53.81 31.54 37.58 40.76 34.40 50.48 46.42 57.04 44.74 36.30 4.22 5.65 22.26 5.86 14.62 11.88 6.85 29.68 8.06 25.19 12.72 10.04 19.23 35 E9_Aa NovelBoundary 1 124.69 50.65 63.04 69.12 20.20 27.09 36.39 100.38 60.24 59.69 2.53 25.66 36.04 0.00 25.09 11.54 0.00 44.27 8.66 27.16 17.24 5.82 20.32 36 ER9a ExonRegion 1 147.51 69.79 197.90 103.41 55.22 149.73 106.22 274.59 322.17 302.20 166.45 96.77 331.07 187.11 222.44 134.08 120.07 209.74 96.76 154.11 177.77 151.91 124.91 37 E9_Ab KnownBoundary 0 66.60 56.50 146.77 76.65 21.56 150.77 65.23 210.42 240.33 273.62 155.57 82.83 214.76 135.09 89.38 85.87 85.18 134.35 44.90 129.11 182.18 72.01 58.05 38 ER9b ExonRegion 1 48.32 37.12 102.80 48.82 34.53 109.22 69.04 114.35 146.85 166.63 118.88 58.01 207.20 113.65 86.67 91.01 71.20 103.63 36.41 78.68 127.17 69.37 87.42 39 E9_Da KnownBoundary 1 52.60 36.97 185.06 97.19 65.53 159.51 95.52 228.25 238.16 237.46 73.39 66.77 219.79 125.49 202.86 87.84 43.29 250.83 63.25 97.09 136.28 129.75 88.52 40 E9a_E9c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER9c ExonRegion 1 107.74 41.81 120.53 47.81 53.67 162.71 97.26 122.02 151.09 175.52 124.60 90.50 285.46 152.17 171.96 85.79 41.77 133.36 66.83 98.77 153.58 125.17 99.73 42 E9_Ac KnownBoundary 1 70.09 29.21 79.54 18.88 40.32 164.45 62.58 86.63 136.60 129.85 85.65 24.61 184.73 87.59 59.34 77.93 31.04 89.37 61.18 51.13 117.07 86.46 89.03 43 ER9d ExonRegion 1 70.06 36.89 118.91 62.17 44.34 135.52 83.99 140.64 171.35 156.80 85.42 51.12 145.17 114.88 96.27 83.65 52.68 132.03 71.43 78.51 113.52 67.62 91.70 44 E9_Db KnownBoundary 0 3.48 14.21 33.12 29.37 12.65 47.87 48.62 32.41 26.48 40.21 1.95 0.00 0.00 14.01 23.24 15.81 8.98 26.78 20.71 16.87 16.37 19.53 26.12 45 E9b_E10a KnownJunction 1 16.23 14.73 91.10 54.54 28.35 85.97 61.61 123.67 140.02 144.97 53.75 72.47 99.67 101.54 57.85 86.64 37.59 155.16 28.05 111.73 83.03 64.36 139.82 46 ER9e ExonRegion 0 29.04 21.65 34.13 35.32 33.14 71.94 46.59 48.00 39.58 42.11 10.28 5.87 14.46 13.00 22.05 19.00 19.38 29.78 17.74 9.43 29.26 15.93 30.88 47 E9_Dc NovelBoundary 0 62.68 33.22 40.30 31.53 42.19 78.70 82.14 75.37 42.04 39.97 6.74 6.30 0.00 21.48 25.47 28.71 30.11 43.40 40.28 18.98 22.55 19.84 41.15 48 I9 Intron 0 35.46 11.98 43.37 36.65 21.18 55.37 28.76 39.36 28.47 31.78 6.05 2.11 12.09 11.33 11.50 12.04 7.90 28.42 9.98 14.10 20.68 9.97 19.46 49 I9_AR1 ActiveIntronRegion 1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 I9_SR1 SilentIntronRegion 0 38.67 13.07 47.30 39.96 23.10 60.39 31.36 42.93 31.04 34.66 6.60 2.30 11.78 12.35 12.54 13.13 8.62 31.00 10.89 15.38 22.56 10.88 21.22 51 E10_Aa NovelBoundary 0 49.19 14.87 63.30 45.65 27.84 97.84 59.27 70.65 49.85 51.33 2.58 12.00 6.33 14.95 27.57 15.55 0.00 55.09 9.41 18.60 29.71 22.90 25.87 52 ER10a ExonRegion 0 39.28 30.50 115.05 67.85 79.53 176.60 101.68 129.11 159.94 154.66 82.13 32.44 91.99 89.67 99.14 69.63 61.93 141.29 50.52 105.18 134.06 73.78 90.31 53 E10a_E11a KnownJunction 1 35.34 13.88 105.26 70.32 67.23 151.11 59.27 120.43 150.64 129.58 55.70 25.06 122.56 58.39 64.53 69.13 54.51 165.61 34.82 68.33 85.81 70.72 64.96 54 ER11a ExonRegion 0 74.90 31.03 140.28 70.16 52.18 156.10 78.02 144.79 161.37 155.40 89.08 25.27 79.02 104.62 110.08 102.72 61.21 194.09 58.71 100.27 136.33 85.85 94.47 55 E11a_E12a KnownJunction 0 30.15 28.09 129.03 57.73 34.55 152.92 31.18 113.24 124.80 112.42 54.75 18.46 39.77 56.21 71.45 67.50 34.88 110.68 47.62 26.97 95.26 57.13 52.07 56 I11 Intron 0 15.34 11.48 29.47 23.24 20.11 25.81 30.91 25.65 25.13 14.15 5.90 1.80 4.03 8.34 13.73 9.75 6.93 19.86 6.80 11.85 6.55 6.36 8.96 57 I11_AR1 ActiveIntronRegion 0 8.30 7.58 33.34 21.02 9.13 17.85 18.70 17.42 20.81 11.80 6.19 0.31 0.71 6.14 15.62 9.00 6.56 20.47 7.02 18.56 4.52 5.20 10.08 58 I11_AR2 ActiveIntronRegion 0 27.77 17.66 29.17 30.28 29.29 33.92 48.15 29.76 32.01 14.64 6.97 2.03 5.42 11.43 15.94 11.77 7.82 24.07 5.72 8.71 12.42 7.79 9.57 59 I11_SR2 SilentIntronRegion 0 16.37 14.49 29.24 24.10 35.18 36.58 40.64 40.45 30.96 20.19 5.22 4.76 9.71 10.54 10.51 9.70 6.60 17.84 7.94 4.57 4.02 7.68 7.18 60 ER12a ExonRegion 0 100.38 56.57 185.09 112.56 102.12 219.89 129.34 183.75 211.42 207.21 95.46 26.05 71.97 115.59 118.07 111.53 58.12 223.62 88.02 98.26 159.34 115.19 113.71 61 E12a_E13a KnownJunction 0 50.08 15.19 132.61 75.35 82.68 199.26 96.23 173.78 187.82 171.22 68.70 24.31 52.11 75.28 83.19 39.56 41.98 117.77 41.41 87.57 132.76 69.99 58.73 62 ER13a ExonRegion 0 51.83 37.70 197.45 104.01 68.13 141.99 86.54 202.74 209.16 195.56 97.95 24.92 55.36 102.64 109.20 76.84 67.47 127.68 65.89 116.19 135.46 95.72 94.35 63 E13_Da NovelBoundary 0 13.93 2.96 51.98 29.00 12.48 23.74 25.92 31.26 44.33 35.91 2.68 0.00 6.82 4.59 13.35 17.09 4.77 60.19 8.85 9.40 11.24 2.94 16.39 64 E13a_E14a KnownJunction 0 72.24 27.89 211.97 97.16 127.08 138.16 78.87 181.92 184.23 195.26 100.50 24.46 57.63 88.70 115.71 103.14 54.51 132.15 46.78 91.66 127.51 100.12 72.47 65 ER14a ExonRegion 0 60.97 30.23 149.83 70.26 72.12 192.00 73.54 119.95 159.66 155.85 99.57 29.56 58.88 89.54 73.44 62.55 45.85 121.68 58.16 86.82 115.82 82.82 78.26 66 E14_Da NovelBoundary 0 19.93 15.00 62.12 4.06 47.79 33.45 15.37 64.86 38.77 39.22 18.79 0.00 26.62 18.60 33.87 15.89 13.37 47.26 4.71 28.83 14.95 35.45 20.23 67 E14a_E15a KnownJunction 0 32.15 44.86 134.59 56.20 49.07 139.98 49.29 101.33 125.66 144.68 88.39 30.31 33.93 45.62 65.39 54.17 36.28 93.39 50.35 82.20 94.40 106.24 89.38 68 ER15a ExonRegion 0 67.15 47.51 163.94 88.79 75.31 230.23 129.92 181.56 209.63 166.62 127.56 28.11 64.37 111.27 90.85 91.37 68.31 143.08 63.50 102.20 140.38 90.62 93.43 69 E15a_E16a KnownJunction 0 77.50 47.89 212.53 112.47 101.61 257.24 162.52 212.19 263.28 218.60 148.72 38.71 98.69 93.30 89.50 73.06 63.58 158.85 66.17 127.13 180.51 97.42 93.90 70 I15_AR1 ActiveIntronRegion 0 29.06 5.60 21.06 9.16 8.79 19.56 16.88 11.53 19.94 11.59 5.75 1.45 17.76 11.12 16.86 21.24 3.95 14.10 1.33 10.24 8.91 7.92 11.07 71 E16_Aa NovelBoundary 0 17.34 2.50 34.15 5.16 4.33 10.90 30.74 14.09 11.31 10.50 10.16 0.00 0.00 10.95 4.45 29.99 31.70 10.49 4.05 16.04 14.02 9.31 0.00 72 ER16a ExonRegion 0 54.90 39.09 186.30 87.73 66.46 147.62 86.14 174.07 213.89 185.58 102.41 23.78 58.12 100.22 88.53 90.54 60.10 169.45 53.88 116.79 123.59 86.35 106.22 73 E16a_E17a KnownJunction 0 77.05 31.11 226.57 128.22 84.47 212.95 69.07 228.74 300.49 245.95 131.09 38.71 60.39 116.72 106.81 81.60 101.73 217.75 37.74 114.35 119.23 95.03 144.35 74 ER17a ExonRegion 0 162.81 113.30 261.67 139.65 168.04 268.89 177.25 228.91 278.26 220.49 105.56 23.98 42.48 109.82 92.09 114.03 62.81 195.30 65.55 116.47 135.38 114.67 116.08 75 IG21 Intergenic 0 66.21 45.42 107.68 53.55 52.99 73.91 54.81 72.60 67.60 51.17 15.54 3.53 5.93 18.20 20.18 20.36 9.34 39.89 12.25 25.58 24.91 27.65 24.90 76 IG21_AR2 ActiveIntergenicRegion 0 231.85 154.44 368.91 188.78 175.88 254.32 180.26 243.26 218.77 178.72 55.55 12.62 20.71 65.13 71.82 72.71 33.22 135.51 42.30 87.52 88.43 98.52 88.20