Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RNF34 Gene 0 146.70 149.73 87.80 93.26 158.87 155.32 158.64 103.87 90.98 140.10 399.45 264.42 249.45 421.64 367.89 395.73 305.50 142.42 177.23 144.39 100.29 75.78 86.27 2 392465 Transcript 0 8.17 4.98 1.21 4.39 12.76 3.92 19.69 1.45 3.68 8.95 9.86 12.50 29.55 17.96 9.18 16.73 18.59 1.91 13.96 9.26 1.58 2.68 1.16 3 361234 Transcript 0 0.00 9.14 12.54 6.09 3.57 4.83 5.74 11.91 15.42 34.06 25.90 0.00 34.74 13.01 14.96 7.18 25.90 7.25 4.61 27.68 16.12 2.69 4.35 4 354795 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 392464 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.41 0.00 0.64 0.00 0.00 0.00 0.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1a ExonRegion 1 98.03 118.47 33.35 44.27 92.36 90.36 111.96 57.30 48.37 87.58 275.74 10.75 60.54 180.82 209.23 344.52 236.32 57.13 207.47 120.35 78.56 43.86 118.05 7 E1a_E2a KnownJunction 1 0.00 0.00 1.63 4.83 0.00 0.00 1.94 1.77 2.86 8.95 0.00 0.00 18.99 2.24 0.00 0.00 8.60 0.00 12.71 3.26 0.00 0.00 0.00 8 E1a_E4a KnownJunction 0 0.00 9.14 12.54 6.09 3.57 4.83 5.74 11.91 15.42 34.06 25.90 0.00 34.74 13.01 14.96 7.18 25.90 7.25 4.61 27.68 16.12 2.69 4.35 9 ER2a ExonRegion 0 16.35 9.96 0.80 3.95 25.51 7.84 37.44 1.13 4.49 8.96 19.73 25.01 40.11 33.69 18.36 33.46 28.57 3.82 15.21 15.26 3.15 5.35 2.33 10 E2a_E4a KnownJunction 1 0.00 8.81 2.72 4.36 20.80 2.56 9.01 3.90 8.39 13.16 41.48 5.85 6.66 51.68 34.86 3.85 46.94 9.87 4.80 8.56 2.59 2.94 0.00 11 ER2b ExonRegion 0 2.91 11.44 2.60 2.73 13.04 4.13 22.01 4.75 5.56 9.75 44.94 23.27 21.69 46.90 29.38 15.98 46.63 9.47 5.57 21.01 2.20 2.08 0.00 12 I2_AR2 ActiveIntronRegion 0 16.57 26.51 10.34 14.75 59.57 12.72 44.43 20.90 10.09 15.65 4.95 45.24 44.58 5.19 24.26 35.48 17.90 6.92 20.40 17.37 2.78 0.09 5.58 13 I2_SR3 SilentIntronRegion 0 34.35 18.08 13.01 15.20 22.62 6.98 30.30 16.20 8.54 13.00 4.56 31.65 30.49 5.99 25.89 40.13 22.78 12.06 19.62 18.01 3.66 0.95 7.09 14 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.41 0.00 0.64 0.00 0.00 0.00 0.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER4a ExonRegion 1 39.44 82.36 57.68 58.19 79.16 91.00 72.90 78.19 81.62 107.87 388.80 107.23 136.42 330.37 257.30 458.20 287.34 175.29 234.79 155.33 117.24 57.29 109.31 16 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER5a ExonRegion 0 107.38 164.25 68.73 78.43 148.56 158.21 177.40 98.38 98.39 129.62 496.63 373.67 343.82 536.93 279.19 422.86 374.55 131.21 178.15 135.48 117.16 83.87 90.74 18 E5a_E6a KnownJunction 0 141.43 107.94 77.97 81.81 200.59 146.51 145.69 83.38 67.42 127.81 479.54 379.77 333.91 552.60 245.38 366.91 385.32 117.98 114.83 100.73 122.57 53.33 95.78 19 I5 Intron 0 28.36 32.21 15.98 24.11 39.25 20.04 46.16 21.51 21.90 24.49 32.00 34.56 42.95 34.85 25.25 54.43 36.72 19.07 21.04 29.48 8.53 10.50 14.14 20 I5_AR1 ActiveIntronRegion 0 16.66 27.30 9.16 17.08 24.77 20.94 45.56 22.85 20.03 20.44 33.56 34.13 44.93 34.99 22.11 51.60 31.58 14.83 17.20 30.69 8.33 9.48 13.14 21 I5_AR2 ActiveIntronRegion 0 37.64 36.37 21.35 29.83 50.54 19.73 47.21 20.94 23.71 27.95 31.44 35.52 42.24 35.31 27.96 57.50 41.28 22.62 24.25 29.02 8.79 11.33 15.16 22 E6_Aa NovelBoundary 0 84.61 48.22 12.74 48.28 63.67 41.62 69.91 20.41 30.47 18.32 27.48 56.27 53.41 28.84 36.22 64.43 23.75 27.48 16.85 38.93 16.68 13.72 20.74 23 ER6a ExonRegion 0 203.57 146.40 51.82 56.63 180.11 140.08 148.78 58.54 54.20 79.11 409.38 448.87 389.68 588.28 367.77 466.88 379.28 92.29 165.64 111.78 123.81 65.66 71.05 24 E6a_E7a KnownJunction 0 243.23 197.27 74.83 84.67 118.68 176.43 151.61 68.35 85.47 109.78 413.89 564.33 387.15 594.51 335.37 419.89 445.16 135.06 148.52 109.62 127.14 79.85 77.94 25 ER7a ExonRegion 0 120.63 169.55 90.51 93.06 188.36 212.51 207.65 104.61 111.28 145.11 449.22 471.57 373.65 518.72 373.27 495.84 362.95 174.71 163.83 130.83 127.85 78.74 91.98 26 E7a_E8a KnownJunction 1 159.07 143.86 120.22 119.90 119.52 165.81 182.35 97.39 126.53 156.36 289.28 534.02 425.46 541.71 731.20 878.49 307.81 329.31 470.88 152.19 139.86 116.71 187.80 27 I7 Intron 0 28.48 28.70 15.83 19.04 30.74 17.24 27.02 15.12 14.10 17.44 18.31 23.70 26.96 19.45 25.50 36.25 27.03 23.43 21.35 20.43 6.94 8.56 12.13 28 I7_AR1 ActiveIntronRegion 0 27.43 37.01 25.17 21.58 28.98 13.78 32.58 20.04 9.38 25.86 21.30 32.38 24.88 15.97 20.95 24.93 21.40 10.16 10.84 20.61 1.43 11.68 8.39 29 I7_SR1 SilentIntronRegion 0 30.98 29.34 11.56 13.79 24.73 15.33 27.68 13.29 10.49 16.17 14.93 21.56 24.32 20.78 22.93 28.52 22.82 14.15 21.37 17.78 4.12 8.06 9.72 30 I7_AR2 ActiveIntronRegion 0 29.94 28.72 15.41 17.53 30.38 16.92 35.85 18.35 15.44 18.81 27.57 33.65 37.57 24.08 27.43 28.00 25.66 18.54 18.50 22.70 9.82 13.38 10.78 31 I7_SR2 SilentIntronRegion 0 34.22 38.00 29.73 31.42 22.55 22.58 26.48 25.48 25.59 22.36 39.19 40.57 47.86 21.93 34.17 38.31 39.98 31.41 27.43 28.37 7.96 8.57 11.96 32 I7_AR3 ActiveIntronRegion 0 27.18 26.11 15.12 20.50 34.48 18.72 24.82 14.14 16.23 15.82 17.51 21.17 26.86 19.15 27.21 43.09 29.82 30.87 23.68 21.10 9.26 7.72 14.26 33 E8_Aa NovelBoundary 0 33.27 18.29 36.60 40.45 19.69 23.45 20.84 16.43 21.99 25.89 25.85 37.66 6.17 2.12 19.41 65.62 37.21 41.08 18.45 30.10 14.21 11.21 0.00 34 ER8a ExonRegion 0 203.05 168.92 118.51 123.50 191.01 176.83 175.53 129.28 100.72 172.54 391.80 241.56 234.46 414.92 473.83 374.83 289.67 158.22 175.66 163.83 90.97 85.95 81.51 35 IG9 Intergenic 0 25.24 28.19 17.86 22.84 56.86 32.48 57.08 22.49 16.37 22.50 32.89 33.48 33.07 19.79 26.99 35.85 38.79 24.52 25.28 27.99 7.90 10.27 18.20 36 IG9_AR1 ActiveIntergenicRegion 0 30.57 35.98 5.88 16.41 40.22 23.61 61.08 11.13 5.98 9.32 13.55 38.56 18.81 16.72 10.32 19.15 19.49 13.93 11.94 15.99 4.71 5.59 6.31 37 IG9_SR1 SilentIntergenicRegion 0 19.61 22.60 11.75 19.48 52.33 30.75 46.79 19.64 12.69 15.76 20.99 26.02 20.06 11.24 19.73 23.39 25.17 17.02 21.82 19.45 5.50 6.75 18.55 38 IG9_AR2 ActiveIntergenicRegion 0 21.75 21.03 19.11 14.66 47.88 27.92 46.02 14.92 17.07 29.08 26.62 25.48 23.03 21.55 20.80 44.12 50.82 32.68 33.95 33.95 10.46 8.42 7.74 39 IG9_AR3 ActiveIntergenicRegion 0 26.02 31.56 28.04 29.35 61.92 37.74 63.29 32.40 22.69 31.94 37.05 40.61 55.53 26.39 33.70 35.13 49.90 29.99 25.85 31.91 9.13 11.47 14.45 40 IG9_AR4 ActiveIntergenicRegion 0 30.37 34.57 17.72 25.70 58.70 27.09 59.45 22.99 18.43 23.60 53.19 39.08 42.41 30.72 35.93 58.84 56.42 33.66 28.36 33.99 9.35 13.72 24.97 41 IG9_SR3 SilentIntergenicRegion 0 44.29 41.89 32.94 31.08 79.78 45.97 98.53 26.97 23.26 37.09 64.74 52.22 53.59 33.31 47.39 64.97 58.39 36.39 35.94 54.17 14.61 23.19 25.01