Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BTBD11 Gene 0 22.27 48.91 25.06 13.72 8.56 3.84 9.55 7.44 32.75 6.90 0.06 1.23 1.04 0.57 1.20 0.44 0.38 132.94 17.16 5.05 16.99 17.46 29.97 2 280758 Transcript 0 0.00 0.00 0.14 0.00 0.00 0.00 0.00 0.00 0.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.52 0.00 0.00 0.00 0.00 0.00 3 415943 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 341886 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 420571 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 490090 Transcript 0 6.27 9.39 4.38 5.63 2.33 1.73 3.50 1.78 8.71 1.56 0.30 5.98 5.06 2.77 5.84 2.15 1.87 42.90 3.75 3.41 4.09 2.63 7.05 7 357167 Transcript 0 0.00 0.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.98 0.45 0.00 0.16 0.30 0.00 8 494235 Transcript 0 0.42 2.83 1.07 0.41 0.00 0.00 0.27 0.00 0.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.60 0.08 0.43 0.00 1.26 2.95 9 ER1a ExonRegion 0 0.00 0.00 0.14 0.00 0.00 0.00 0.00 0.00 0.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.52 0.00 0.00 0.00 0.00 0.00 10 ER1b ExonRegion 0 1.04 1.00 1.42 0.82 0.26 0.54 0.52 2.78 8.03 2.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59.34 3.98 1.31 9.98 5.23 13.70 11 E1_Ac KnownBoundary 0 0.00 2.76 3.52 1.27 0.00 0.00 0.00 0.00 20.92 3.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 148.73 4.42 2.75 15.07 9.12 22.37 12 ER1c ExonRegion 0 0.33 1.57 2.19 1.20 0.27 1.20 0.47 1.63 10.40 2.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 95.36 6.47 2.66 16.72 5.80 18.94 13 E1_Ad KnownBoundary 0 0.00 2.50 1.63 1.50 0.00 0.00 0.00 2.55 14.61 3.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 85.64 0.00 0.00 26.13 8.08 28.43 14 ER1d ExonRegion 0 2.79 6.41 2.63 0.89 1.11 0.81 2.20 6.31 22.71 2.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 223.62 16.32 4.81 20.57 6.91 33.21 15 E1a_E2a KnownJunction 0 6.37 6.45 8.66 3.83 0.00 0.00 0.00 8.71 31.05 7.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 301.49 29.74 12.59 37.19 19.10 51.64 16 I1_AR8 ActiveIntronRegion 0 2.12 2.03 0.00 0.00 0.00 0.00 1.32 0.00 4.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.24 0.00 2.13 2.05 0.00 10.70 17 ER2a ExonRegion 0 3.39 6.05 3.74 3.89 0.91 0.56 0.90 5.77 31.03 3.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 226.19 21.26 7.05 36.41 18.86 36.63 18 E2a_E3a KnownJunction 0 0.00 13.75 6.89 6.19 0.00 8.52 0.00 9.45 42.33 4.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 318.94 35.95 7.86 51.28 11.57 54.12 19 ER3a ExonRegion 0 1.57 11.96 4.00 4.54 0.67 0.96 1.32 2.55 32.68 1.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 252.15 26.59 3.57 30.05 20.30 39.24 20 E3a_E5a KnownJunction 0 0.00 6.38 0.00 3.33 0.00 0.00 0.00 0.00 19.82 1.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 188.61 12.24 2.68 19.58 17.39 28.26 21 ER4a ExonRegion 0 0.00 0.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.97 0.91 0.00 0.31 0.59 0.00 22 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER5a ExonRegion 0 0.82 10.69 5.37 3.39 1.54 2.40 2.65 0.12 10.95 2.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 88.96 5.73 2.96 12.65 9.67 21.00 24 E5a_E6a KnownJunction 0 8.96 15.19 17.15 5.16 3.82 2.38 0.00 1.73 21.38 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 217.26 12.42 2.56 22.92 9.37 46.78 25 ER6a ExonRegion 0 6.04 17.19 18.34 9.53 0.55 2.30 1.87 7.33 52.45 7.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 332.06 23.54 9.59 23.21 22.58 69.91 26 E6a_E7a KnownJunction 0 6.08 37.69 25.22 6.53 6.96 0.00 7.55 6.37 50.55 5.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 222.60 28.89 11.89 28.73 24.86 41.83 27 ER7a ExonRegion 0 7.90 35.20 17.77 8.69 6.99 0.31 8.58 8.16 42.95 9.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 226.97 21.45 8.98 20.00 15.14 52.79 28 E7a_E8a KnownJunction 0 3.78 51.90 20.19 12.49 0.00 2.61 4.50 16.92 57.44 16.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 380.83 31.53 15.98 20.63 20.88 75.72 29 ER8a ExonRegion 0 1.91 37.02 16.75 12.19 4.04 2.57 10.23 11.29 42.21 13.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 260.26 35.66 8.16 26.14 26.68 70.59 30 E8a_E9a KnownJunction 0 3.48 28.42 16.11 8.72 3.57 0.00 7.42 4.64 29.95 8.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 309.95 59.01 4.99 22.61 16.90 24.33 31 ER9a ExonRegion 0 6.87 23.71 18.45 10.54 4.07 5.87 2.10 7.10 29.26 7.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 313.15 27.38 6.75 28.81 15.40 46.30 32 E9a_E10a KnownJunction 0 0.00 31.84 30.28 15.62 3.40 0.00 6.32 5.71 32.99 12.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 295.85 21.37 2.62 32.43 11.14 38.41 33 E9a_E12a KnownJunction 0 0.00 0.00 0.00 6.16 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.67 0.00 0.00 0.00 0.00 0.00 34 ER10a ExonRegion 0 7.22 31.60 15.23 10.64 7.08 4.11 7.74 6.90 35.95 8.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 276.75 30.00 5.04 28.84 15.75 49.30 35 E10a_E11a KnownJunction 0 17.19 48.35 21.91 15.32 12.31 2.61 4.24 3.90 28.24 6.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 232.59 8.75 6.14 38.80 15.74 38.75 36 ER11a ExonRegion 0 7.96 35.91 18.23 7.31 5.19 2.97 7.23 6.80 24.67 8.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 220.32 17.31 5.09 28.02 17.55 38.35 37 E11_Da NovelBoundary 0 0.00 0.00 3.34 0.00 0.00 0.00 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.31 0.00 0.00 2.84 2.94 16.30 38 E11a_E12a KnownJunction 0 18.89 31.97 14.37 8.82 3.90 0.00 5.43 6.74 52.14 11.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 295.77 17.98 3.26 21.87 11.51 51.47 39 ER12a ExonRegion 0 13.96 52.28 21.06 10.88 4.35 5.54 10.64 6.78 40.77 12.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 295.96 29.26 10.04 32.53 22.19 41.52 40 E12a_E14a KnownJunction 0 16.74 71.43 33.17 16.91 6.79 2.90 6.36 7.89 36.78 19.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 327.77 35.77 6.33 18.29 26.33 27.66 41 ER13a ExonRegion 0 0.85 3.15 2.14 0.82 0.00 0.00 0.53 0.00 0.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.19 0.15 0.85 0.00 2.51 5.90 42 E13a_E14a KnownJunction 0 0.00 2.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER14a ExonRegion 0 12.67 105.21 30.82 10.59 15.42 4.48 12.09 7.20 37.30 10.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 290.82 30.03 11.75 28.02 26.89 46.74 44 E14_Da NovelBoundary 0 22.60 68.54 27.14 11.69 7.56 5.28 15.10 3.12 45.46 6.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 151.93 28.80 13.87 33.30 15.49 35.85 45 E14b_E15a KnownJunction 0 20.82 89.59 24.84 11.95 20.71 10.85 10.20 5.09 53.62 8.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 185.75 27.20 8.82 36.20 39.68 48.32 46 ER14b ExonRegion 0 19.34 74.23 28.74 12.20 15.45 9.00 12.28 4.09 51.26 7.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 184.52 32.00 11.90 41.47 28.98 48.45 47 ER15a ExonRegion 0 14.16 65.02 40.73 19.61 18.78 8.07 16.29 7.53 61.53 8.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 211.47 35.26 12.19 20.65 43.81 41.03 48 E15a_E16a KnownJunction 0 26.60 64.20 51.68 24.67 0.00 16.35 12.19 6.82 74.25 10.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 273.22 29.93 11.25 10.63 31.72 56.34 49 ER16a ExonRegion 0 22.74 83.15 37.52 21.94 11.58 8.34 14.93 4.97 63.98 10.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 229.14 45.61 7.58 32.17 32.68 61.96 50 E16a_E17a KnownJunction 0 25.93 151.75 21.47 21.11 26.49 20.22 27.56 4.93 78.62 9.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 175.06 45.84 11.57 42.13 40.90 44.90 51 E17_Aa NovelBoundary 0 10.45 41.05 3.46 0.00 3.31 0.00 6.89 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.21 7.34 5.11 10.19 7.16 11.01 52 ER17a ExonRegion 0 25.80 108.93 14.76 14.32 18.73 9.51 18.38 4.18 67.47 10.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 184.75 36.19 9.28 32.99 39.86 39.28 53 E17_Da KnownBoundary 0 6.74 2.63 1.69 7.66 0.00 0.00 0.00 0.00 6.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.48 0.00 0.00 3.15 0.00 3.76 54 E17a_E18a KnownJunction 0 41.49 113.99 14.81 11.52 10.02 13.97 12.67 4.60 57.99 15.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 170.37 16.19 9.01 30.46 47.15 59.84 55 ER17b ExonRegion 0 2.12 1.11 6.13 5.41 1.38 0.00 0.00 0.00 7.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.42 2.61 0.00 1.60 5.68 4.45 56 E17_Db KnownBoundary 0 0.00 2.70 7.24 1.50 4.07 0.00 0.00 0.00 6.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.89 4.80 0.00 0.00 11.21 8.02 57 ER17c ExonRegion 0 6.27 9.39 4.38 5.63 2.33 1.73 3.50 1.78 8.71 1.56 0.30 5.98 5.06 2.77 5.84 2.15 1.87 42.90 3.75 3.41 4.09 2.63 7.05 58 E18_Aa NovelBoundary 0 7.11 21.64 1.63 3.93 7.47 0.00 0.00 2.38 9.46 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.55 0.00 0.00 2.53 0.00 0.00 59 ER18a ExonRegion 0 24.01 123.57 37.66 19.90 12.31 10.25 17.80 12.84 53.04 12.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 253.12 44.46 9.06 45.35 27.33 50.90 60 E18_Da NovelBoundary 0 13.11 63.02 29.30 11.29 0.00 0.00 10.78 9.16 40.31 11.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 167.31 49.98 5.31 40.90 27.98 37.30 61 E18b_E19a KnownJunction 0 21.41 157.47 44.32 22.37 16.64 7.95 35.82 9.12 57.49 20.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 252.24 41.88 3.07 29.84 33.07 80.50 62 ER18b ExonRegion 0 19.25 117.75 37.23 19.34 10.83 4.45 24.21 10.78 55.70 17.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 243.64 47.33 4.86 38.09 29.67 62.79 63 ER19a ExonRegion 0 36.69 149.12 51.02 25.50 12.56 12.09 21.82 17.10 62.86 14.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 271.49 33.63 9.04 41.47 31.76 52.96 64 E19_Da KnownBoundary 0 51.79 124.71 56.65 28.13 12.14 5.34 37.67 16.02 48.58 17.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 267.17 54.21 5.50 58.32 27.07 55.74 65 ER19b ExonRegion 0 72.15 131.33 73.11 37.45 25.26 8.10 25.39 18.75 71.17 15.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 149.55 30.42 7.28 19.96 38.05 48.23