Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MMAB Gene 0 19.74 41.35 59.29 56.30 42.57 37.62 49.47 58.41 36.24 59.76 50.72 14.08 26.42 58.82 127.68 78.21 73.59 84.16 43.39 47.72 35.06 17.97 17.90 2 266839 Transcript 1 37.79 76.48 143.09 82.19 60.98 100.00 97.56 58.26 42.31 86.75 161.09 23.37 64.95 183.30 372.84 212.79 221.87 163.07 82.31 107.45 102.52 45.74 38.51 3 ER1a ExonRegion 1 19.86 51.53 31.82 17.53 38.02 62.03 68.94 21.24 15.42 33.51 59.28 2.30 18.49 56.95 107.53 60.98 94.53 45.37 42.41 39.45 46.16 19.67 20.91 4 E1a_E2a KnownJunction 1 9.41 15.00 87.70 45.75 3.82 7.84 15.59 45.39 26.39 67.50 135.98 5.40 68.02 79.11 159.10 70.41 189.90 55.38 76.43 68.01 98.53 17.02 7.60 5 ER2a ExonRegion 1 22.67 36.64 115.13 81.31 11.83 29.64 31.28 68.64 39.32 93.99 233.63 14.87 37.97 228.84 339.35 204.36 337.12 141.47 108.76 115.85 149.07 60.15 47.98 6 E2_Da NovelBoundary 0 0.00 0.00 9.05 13.02 3.48 0.00 13.91 0.00 0.00 0.00 7.21 6.30 6.82 0.00 4.45 14.10 0.00 6.67 16.19 13.23 2.47 0.00 0.00 7 E2a_E3a KnownJunction 0 33.41 51.44 163.77 123.66 12.65 31.35 39.35 101.66 52.89 119.32 170.15 29.56 40.09 276.71 459.73 459.45 214.59 249.47 151.35 112.24 94.52 88.60 72.13 8 ER3a ExonRegion 0 20.02 47.03 170.91 108.57 90.55 148.46 115.75 89.24 44.03 111.24 185.81 43.43 80.18 215.78 354.91 333.32 235.07 232.01 99.19 112.58 117.03 67.40 61.79 9 E3_Da NovelBoundary 0 17.48 0.00 11.32 18.88 13.92 6.87 6.62 1.73 4.77 3.63 15.06 5.40 20.45 32.55 15.33 15.30 25.43 25.16 12.24 12.53 2.66 0.00 3.59 10 E3a_E4a KnownJunction 1 16.82 60.19 220.87 104.62 217.91 375.01 323.27 79.44 48.90 107.53 176.47 11.85 93.18 158.04 367.64 164.91 235.25 168.26 109.56 130.97 101.81 47.15 17.16 11 I3 Intron 0 3.20 3.33 5.98 10.74 5.05 4.39 9.00 7.14 3.94 4.31 12.90 5.52 11.67 12.51 26.95 27.70 27.84 21.86 13.24 13.66 6.94 4.20 6.29 12 I3_AR1 ActiveIntronRegion 0 3.47 4.66 5.09 10.18 5.41 4.16 9.02 7.26 4.31 4.17 12.15 6.32 13.37 10.18 23.85 29.38 26.00 23.14 12.29 9.04 7.12 5.35 4.74 13 I3_SR1 SilentIntronRegion 0 2.71 0.76 7.80 11.98 4.43 4.89 9.10 6.99 3.28 4.65 14.53 4.01 8.52 17.27 33.43 24.80 31.87 19.67 15.29 22.95 6.68 1.99 9.41 14 E4_Aa NovelBoundary 0 3.78 5.99 4.76 11.49 8.23 13.34 25.48 8.63 9.84 6.55 2.21 5.55 20.45 2.24 51.92 21.87 13.00 23.92 7.25 9.40 5.25 2.88 0.00 15 ER4a ExonRegion 0 35.58 102.13 196.42 115.45 144.86 234.73 218.66 79.24 56.67 103.64 219.28 36.73 115.55 188.62 397.62 189.81 245.52 185.76 121.92 146.51 127.97 51.91 35.54 16 E4_Da NovelBoundary 0 27.78 43.41 9.37 14.72 12.39 19.87 30.47 16.35 16.58 11.74 14.58 6.30 12.66 3.00 10.26 27.43 30.48 51.32 27.01 20.65 14.58 5.82 15.28 17 E4a_E5a KnownJunction 1 60.46 176.15 191.03 136.38 113.16 186.65 168.79 89.79 54.89 112.85 248.91 29.86 147.56 252.93 494.22 241.73 359.51 215.31 110.78 135.76 176.99 63.74 31.84 18 I4 Intron 0 3.67 8.46 7.59 11.47 3.06 6.86 7.48 6.69 7.85 9.53 7.70 3.46 13.45 5.46 18.64 20.39 14.30 26.16 12.36 10.25 5.27 3.32 5.39 19 I4_AR1 ActiveIntronRegion 0 4.76 7.69 0.00 0.00 2.01 2.75 4.98 0.00 0.00 0.00 10.15 2.67 11.17 3.01 16.51 11.15 14.85 2.80 23.89 1.60 1.65 4.69 2.20 20 I4_SR1 SilentIntronRegion 0 2.72 8.29 7.38 9.97 3.44 5.63 6.43 5.97 7.18 7.68 6.95 1.94 9.56 4.70 21.25 19.16 12.87 17.46 10.41 8.59 3.09 2.47 3.61 21 I4_AR2 ActiveIntronRegion 0 0.00 2.03 17.31 17.21 0.67 5.50 3.97 6.70 17.29 17.20 11.11 4.33 9.38 8.32 29.01 26.75 14.03 39.96 9.56 11.17 11.02 6.25 4.77 22 I4_AR3 ActiveIntronRegion 0 4.57 9.80 12.85 19.32 2.82 9.55 10.05 11.37 12.73 14.59 9.19 4.86 18.95 7.58 20.40 27.10 21.51 54.20 16.00 16.79 9.59 4.95 10.31 23 I4_AR4 ActiveIntronRegion 0 11.05 4.97 6.63 10.90 2.48 8.97 1.86 4.55 8.78 12.62 3.36 2.89 21.89 3.73 5.59 8.59 23.60 31.55 3.19 14.26 14.94 4.48 8.70 24 I4_SR2 SilentIntronRegion 0 4.22 8.64 4.59 9.65 3.11 7.96 9.20 5.76 6.22 10.98 8.08 5.75 18.18 6.06 12.90 19.58 10.27 22.64 11.37 9.29 6.04 3.26 4.58 25 E5_Aa NovelBoundary 1 7.56 5.85 7.92 17.08 23.26 4.88 8.08 10.23 3.12 5.53 5.37 0.00 33.11 5.47 4.45 6.49 4.49 24.83 8.94 9.46 5.99 0.00 0.00 26 ER5a ExonRegion 0 47.46 98.39 148.37 94.94 48.93 76.59 72.73 62.72 32.64 94.63 201.58 32.32 82.75 200.17 439.20 186.67 274.29 152.05 79.90 139.08 120.90 57.80 32.58 27 E5a_E6a KnownJunction 0 80.38 81.56 166.67 77.51 25.89 76.66 63.68 46.58 27.81 81.82 179.26 66.02 112.49 238.10 542.56 234.13 224.59 164.98 77.93 141.07 117.01 47.76 39.27 28 E5a_E7a NovelJunction 0 5.93 29.27 17.50 16.88 4.33 8.23 6.05 12.32 4.17 18.67 2.21 0.00 0.00 2.47 15.08 0.00 11.31 0.00 0.00 14.76 0.00 0.00 0.00 29 ER6a ExonRegion 0 54.77 76.84 128.51 64.71 26.70 34.17 55.31 43.46 39.13 79.41 134.95 31.23 65.80 211.57 461.54 226.73 263.63 182.80 69.95 97.72 105.76 49.24 41.53 30 E6a_E7a KnownJunction 1 44.30 74.86 139.11 41.19 35.40 50.14 83.64 41.77 43.23 73.04 99.92 6.30 12.50 272.18 473.70 188.75 204.49 165.48 76.52 64.75 87.29 21.49 56.08 31 I6 Intron 0 3.08 1.98 5.32 1.97 3.47 1.19 4.50 6.26 1.79 5.53 10.95 1.86 8.75 3.26 12.85 6.74 9.09 17.25 9.80 14.47 3.57 1.35 3.33 32 I6_AR1 ActiveIntronRegion 0 3.86 2.13 5.92 2.30 4.26 0.90 4.65 7.49 1.96 6.28 15.40 1.58 12.31 3.92 15.41 7.62 9.73 18.97 12.66 17.74 4.18 1.90 4.01 33 ER7a ExonRegion 1 31.16 79.84 144.67 53.05 29.68 65.06 75.02 30.95 34.91 66.22 126.17 7.13 43.73 186.35 378.55 170.19 224.82 128.06 64.49 112.70 92.83 26.09 32.71 34 E7a_E8a KnownJunction 0 34.60 106.43 170.96 75.48 37.52 88.64 100.87 41.94 47.71 87.65 163.62 25.96 35.55 149.57 360.34 204.13 218.05 202.87 41.41 149.12 100.76 40.66 51.64 35 I7 Intron 0 1.64 3.77 5.01 8.55 3.31 3.76 7.62 4.98 3.41 6.21 4.33 1.24 5.71 3.26 5.95 9.07 5.99 23.56 5.17 8.06 4.00 1.85 3.29 36 I7_SR1 SilentIntronRegion 0 1.60 4.08 5.37 8.42 3.12 3.92 7.79 4.90 3.41 6.15 4.64 1.21 6.30 3.52 5.69 9.62 5.56 22.61 5.60 8.33 3.86 2.02 3.56 37 I7_SR2 SilentIntronRegion 0 1.80 2.57 3.62 9.15 4.14 3.17 7.01 5.25 3.47 6.43 3.13 1.38 3.45 2.22 7.07 6.90 7.80 27.51 3.50 7.04 4.56 1.21 2.27 38 E8_Aa NovelBoundary 0 2.74 10.00 3.02 10.02 3.82 0.00 4.50 7.23 1.13 2.47 2.32 0.00 0.00 2.30 0.00 3.59 13.09 25.54 0.00 14.76 4.94 2.94 3.59 39 ER8a ExonRegion 1 44.69 104.59 147.82 83.29 63.24 95.75 85.13 40.99 55.91 85.67 166.42 16.60 57.14 185.23 401.63 270.41 220.17 206.61 61.64 109.57 103.39 46.98 44.05 40 E8_Da NovelBoundary 0 3.70 0.00 14.96 16.02 19.27 10.16 14.35 3.61 8.45 12.68 10.37 0.00 0.00 22.01 16.07 28.45 18.98 39.34 28.89 27.29 11.74 5.39 7.85 41 E8a_E9a KnownJunction 0 69.72 101.96 161.32 119.47 95.93 109.60 98.39 46.87 62.90 100.09 205.89 24.91 72.72 178.59 512.27 355.04 185.32 203.91 69.84 113.52 80.56 59.21 47.97 42 I8 Intron 0 6.27 9.70 14.39 20.33 8.99 6.63 9.95 8.75 6.85 13.34 9.85 2.12 6.43 12.27 22.53 18.26 12.05 32.01 7.71 18.15 7.25 3.24 2.12 43 I8_SR2 SilentIntronRegion 0 5.42 7.15 15.62 17.14 7.65 3.99 7.88 8.84 7.98 15.86 9.24 1.72 4.55 12.63 18.94 17.93 8.89 36.70 8.26 17.24 7.51 2.73 1.99 44 I8_AR1 ActiveIntronRegion 0 8.14 14.04 15.02 26.26 11.61 10.53 13.32 9.80 6.39 12.57 11.47 2.93 8.67 12.68 26.71 21.14 16.28 29.91 7.19 20.11 7.35 4.03 2.16 45 E9_Aa NovelBoundary 0 18.15 35.06 39.15 55.57 4.24 25.84 20.14 11.50 9.03 22.27 18.32 0.00 6.49 21.43 51.55 43.83 23.09 44.94 21.46 42.95 2.29 5.82 16.73 46 ER9a ExonRegion 0 17.15 35.55 47.48 54.28 40.55 27.62 42.15 60.44 36.56 56.68 31.20 12.79 20.50 37.29 88.41 56.35 44.99 72.42 37.13 37.81 22.33 12.75 13.93