Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ALDH1L2 Gene 0 7.73 28.14 9.05 38.46 9.21 57.57 25.33 14.01 33.25 10.83 0.28 133.84 81.74 20.90 8.26 25.78 35.49 46.73 12.26 62.55 95.58 64.09 63.53 2 419290 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 424857 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.25 0.00 0.00 0.00 0.00 17.05 1.17 0.00 0.00 0.37 5.36 0.00 0.00 0.00 0.00 0.00 0.18 4 258494 Transcript 0 11.13 38.25 9.67 36.12 10.82 69.62 30.44 17.06 32.43 12.48 0.13 144.07 85.30 20.75 10.21 28.07 37.57 53.53 14.16 67.32 104.53 69.33 71.37 5 ER1a ExonRegion 0 0.00 0.61 0.00 0.66 0.00 3.90 0.38 0.22 1.39 0.43 0.00 0.00 0.00 3.94 1.49 3.35 6.22 4.96 0.00 8.45 20.02 4.88 3.10 6 E1a_E2a KnownJunction 0 0.00 8.81 0.00 3.36 0.00 8.35 4.24 1.64 3.62 1.53 0.00 0.00 0.00 4.94 0.00 7.09 8.32 13.68 0.00 30.10 32.87 11.08 12.04 7 ER2a ExonRegion 0 0.76 4.56 1.45 20.16 0.00 17.19 8.13 4.77 10.49 4.80 0.68 12.63 3.30 11.54 5.08 13.26 10.22 42.60 4.88 38.11 60.67 27.00 32.95 8 E2a_E3a KnownJunction 0 0.00 6.51 1.33 30.03 0.00 32.31 11.92 8.83 20.43 7.84 0.00 12.00 15.10 27.31 20.64 22.73 25.43 45.31 4.61 36.05 76.17 40.17 44.82 9 ER3a ExonRegion 0 1.66 10.64 5.31 27.24 2.66 30.36 17.74 10.25 27.88 11.63 0.00 51.77 28.08 16.48 5.78 22.85 35.62 51.38 7.59 51.76 89.34 51.98 48.74 10 E3a_E4a KnownJunction 0 3.78 23.35 2.78 26.57 4.33 37.99 16.69 12.77 33.80 9.51 0.00 86.13 95.45 18.36 0.00 31.96 52.73 32.67 3.95 73.38 79.88 56.76 64.28 11 E4_Aa NovelBoundary 0 0.00 0.00 4.76 28.50 0.00 0.00 4.37 1.93 1.65 0.00 0.00 0.00 6.01 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 0.00 7.34 12 ER4a ExonRegion 0 6.34 18.31 7.95 29.88 6.40 34.99 21.43 6.92 31.64 8.93 0.00 104.04 72.61 19.48 5.21 24.30 37.05 44.35 13.62 57.40 88.03 58.53 70.11 13 E4a_E5a KnownJunction 0 13.11 12.17 11.00 33.16 16.47 31.18 19.12 5.26 31.28 8.78 0.00 94.98 53.73 14.54 0.00 19.99 11.97 49.08 4.14 64.88 98.16 64.54 55.23 14 ER5a ExonRegion 0 8.47 13.01 8.58 31.07 10.70 35.94 22.24 5.19 32.11 11.24 0.00 107.37 44.09 13.32 0.00 24.97 15.84 48.41 4.46 64.26 107.54 69.17 76.94 15 ER5b ExonRegion 0 6.35 15.79 7.28 37.76 12.12 43.69 26.87 5.19 32.91 11.87 0.00 129.63 43.87 17.01 1.19 25.18 18.64 54.13 7.31 72.84 105.39 65.45 72.55 16 ER5c ExonRegion 0 6.75 11.08 6.17 33.94 9.16 69.04 32.83 9.42 34.64 15.64 0.00 150.50 62.49 24.91 5.15 51.60 35.11 39.47 16.88 58.22 100.19 66.72 76.57 17 E5_Db NovelBoundary 0 12.00 0.00 3.19 15.72 10.61 0.00 4.37 2.55 4.95 3.73 0.00 25.06 0.00 4.59 0.00 0.00 0.00 0.00 0.00 11.12 3.15 0.00 0.00 18 E5b_E6a KnownJunction 1 6.67 14.14 13.28 29.17 3.74 59.23 35.37 17.25 37.56 12.30 0.00 305.50 79.70 29.78 0.00 31.10 54.42 38.68 14.12 59.57 118.98 91.48 113.53 19 E6_Aa NovelBoundary 0 0.00 11.58 0.00 17.68 0.00 0.00 0.00 0.00 0.00 2.98 0.00 0.00 7.14 0.00 0.00 0.00 4.77 6.84 0.00 0.00 5.68 0.00 3.16 20 ER6a ExonRegion 0 9.74 23.39 8.77 29.23 8.56 56.62 19.87 14.88 33.70 10.98 0.00 171.59 79.42 21.56 4.96 27.77 27.36 53.38 18.55 61.65 103.45 74.96 83.79 21 E6_Da NovelBoundary 0 7.04 6.38 9.17 6.09 3.57 2.56 4.20 2.01 2.60 4.84 2.68 0.00 0.00 0.00 0.00 16.66 8.70 0.00 0.00 6.26 6.24 0.00 0.00 22 E6a_E7a KnownJunction 0 6.00 48.22 10.38 31.76 8.57 71.10 18.46 21.81 30.67 19.37 0.00 117.94 89.44 19.48 0.00 39.73 42.26 69.60 14.78 48.51 96.50 83.64 69.66 23 E7_Aa NovelBoundary 0 0.00 6.58 1.83 19.84 0.00 8.63 0.00 6.37 1.50 1.05 0.00 0.00 6.49 0.00 4.94 3.85 0.00 0.00 0.00 7.99 0.00 0.00 0.00 24 ER7a ExonRegion 0 3.84 33.49 6.65 47.92 8.40 54.99 26.50 15.10 35.53 16.91 0.73 205.60 92.38 23.92 6.38 28.91 40.54 51.26 10.24 66.92 102.32 69.08 74.59 25 E7a_E8a KnownJunction 0 3.41 35.98 6.48 26.74 4.33 61.84 17.31 13.23 35.56 10.80 0.00 215.02 97.07 32.55 9.64 23.93 60.59 39.38 12.42 76.64 115.96 65.09 82.72 26 ER8a ExonRegion 0 4.69 30.28 7.18 44.51 6.50 50.34 24.97 9.84 38.41 10.02 0.00 162.80 101.02 27.93 8.50 22.93 44.59 65.62 12.62 80.85 113.75 64.52 65.03 27 E8a_E9a KnownJunction 0 6.74 39.07 11.95 31.93 7.30 55.14 23.10 8.46 45.28 7.63 0.00 214.12 113.30 47.03 4.45 25.12 36.75 64.00 18.26 73.25 126.71 72.19 54.97 28 ER9a ExonRegion 0 10.86 29.93 9.96 27.48 7.36 67.03 27.05 17.89 31.15 7.72 3.21 145.27 85.75 32.69 11.51 20.38 44.78 37.40 9.52 65.66 124.77 63.91 80.50 29 E9_Da NovelBoundary 0 10.30 0.00 3.13 13.05 4.16 8.69 10.25 2.34 0.00 4.35 7.79 24.61 0.00 0.00 8.90 11.36 7.76 2.45 9.22 0.00 0.00 0.00 0.00 30 E9a_E10a KnownJunction 0 3.78 39.93 9.31 23.27 7.13 42.25 27.07 20.99 30.96 4.94 0.00 116.14 120.61 19.48 4.45 15.81 25.06 32.25 4.80 69.03 106.94 67.23 43.54 31 E10_Aa NovelBoundary 0 3.78 2.50 1.66 7.79 0.00 0.00 9.67 2.55 0.00 1.34 0.00 6.30 19.80 0.00 0.00 0.00 13.09 0.00 4.80 2.56 0.00 0.00 0.00 32 ER10a ExonRegion 0 10.40 28.76 15.54 28.45 4.54 53.33 22.12 15.44 38.57 6.89 0.00 138.10 94.40 23.91 6.21 28.24 39.74 39.61 18.36 71.84 103.57 68.04 69.75 33 E10a_E11a KnownJunction 1 3.48 20.06 17.80 29.93 3.82 79.95 45.84 25.84 39.64 3.98 0.00 131.89 101.45 26.43 5.44 12.39 54.51 25.16 3.58 73.38 69.38 78.62 87.50 34 I10_SR1 SilentIntronRegion 0 1.01 3.77 0.68 10.23 0.43 1.36 3.72 1.37 1.27 1.99 0.20 14.16 16.64 1.04 0.59 1.89 1.92 2.83 1.86 5.64 3.27 2.65 2.96 35 E11_Aa NovelBoundary 0 0.00 3.35 1.71 10.99 3.90 0.00 2.21 0.00 1.16 0.00 0.00 32.41 13.15 0.00 0.00 0.00 12.90 6.67 4.61 6.33 0.00 3.06 0.00 36 ER11a ExonRegion 0 7.48 27.42 15.00 52.20 3.41 67.18 30.61 19.03 41.28 7.40 0.00 186.38 129.68 27.80 14.26 31.21 62.30 32.35 20.78 79.36 81.46 82.87 60.69 37 E11_Da NovelBoundary 0 3.33 3.29 0.00 13.15 0.00 0.00 2.25 0.00 1.39 1.40 0.00 30.46 39.77 0.00 0.00 0.00 9.54 5.35 0.00 0.00 0.00 0.00 0.00 38 E11a_E12a KnownJunction 0 0.00 22.10 17.33 30.70 8.40 57.52 30.34 16.14 40.16 10.40 0.00 181.41 72.40 14.72 4.45 28.97 68.63 45.31 27.77 71.33 57.89 72.07 60.18 39 E12_Aa NovelBoundary 0 7.56 6.05 0.00 19.21 0.00 0.00 6.36 2.55 1.74 1.32 0.00 0.00 6.49 0.00 0.00 4.10 0.00 0.00 0.00 2.56 3.09 0.00 0.00 40 ER12a ExonRegion 0 2.94 30.63 13.81 31.80 10.22 68.11 27.52 15.89 42.94 9.44 0.00 198.24 117.10 26.39 7.21 31.74 47.50 38.21 14.96 75.55 89.10 79.60 73.67 41 E12a_E14a KnownJunction 0 3.56 47.95 12.95 26.74 0.00 48.49 38.69 14.87 43.52 15.37 0.00 188.46 52.92 24.25 4.45 49.05 50.77 49.37 28.52 58.29 68.33 112.85 78.79 42 I12 Intron 0 1.38 4.77 1.67 18.54 1.40 2.39 5.01 1.01 1.44 2.01 0.25 9.70 9.39 1.12 1.65 1.94 3.01 1.56 0.83 3.61 1.72 3.26 2.30 43 I12_SR1 SilentIntronRegion 0 1.38 4.79 1.67 18.59 1.40 2.40 5.02 1.01 1.44 2.01 0.25 9.72 9.42 1.12 1.65 1.94 3.02 1.56 0.83 3.62 1.73 3.27 2.30 44 ER13a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.25 0.00 0.00 0.00 0.00 17.05 1.17 0.00 0.00 0.37 5.36 0.00 0.00 0.00 0.00 0.00 0.18 45 I13 Intron 0 3.98 5.74 3.82 21.01 1.12 5.56 10.65 1.62 5.19 1.79 0.61 54.18 28.57 2.04 2.89 6.83 4.50 5.58 0.67 7.34 7.36 5.23 7.67 46 I13_AR1 ActiveIntronRegion 0 3.99 5.75 3.82 21.06 1.12 5.57 10.67 1.62 5.20 1.79 0.61 54.29 28.63 2.04 2.90 6.85 4.51 5.59 0.67 7.36 7.38 5.24 7.69 47 E14_Aa NovelBoundary 0 2.96 9.47 4.32 26.77 0.00 12.78 18.02 11.30 4.77 6.15 0.00 63.47 46.10 8.36 0.00 0.00 4.77 10.74 0.00 5.56 7.54 8.45 11.27 48 ER14a ExonRegion 0 12.57 29.17 12.57 30.53 8.77 65.26 36.01 10.27 32.56 14.98 0.00 205.18 99.48 25.13 10.95 37.97 42.76 55.11 16.81 69.76 129.38 87.08 67.62 49 E14_Da NovelBoundary 0 3.19 2.63 2.78 17.08 7.98 17.66 14.79 1.93 0.00 2.98 2.68 6.30 6.82 0.00 0.00 0.00 0.00 2.07 0.00 3.07 8.90 0.00 3.41 50 E14a_E15a KnownJunction 0 25.56 52.10 15.43 34.66 20.03 112.21 43.54 10.02 37.44 21.92 0.00 218.62 112.65 36.32 24.97 53.58 59.75 62.88 47.44 84.18 135.60 136.55 115.75 51 E15_Aa NovelBoundary 0 7.56 16.12 1.71 19.74 4.33 4.88 7.51 6.90 0.00 6.53 0.00 5.55 13.31 0.00 0.00 0.00 4.58 0.00 0.00 0.00 2.35 2.63 0.00 52 ER15a ExonRegion 0 16.43 36.17 8.22 32.50 13.42 80.04 37.44 13.44 28.83 18.11 0.00 199.58 85.08 32.99 12.10 37.88 36.12 63.86 17.95 73.39 109.91 75.74 75.65 53 E15a_E16a KnownJunction 0 17.04 41.77 3.67 42.09 8.49 84.89 45.66 7.93 29.48 16.55 0.00 181.56 82.62 14.36 24.11 43.32 36.56 61.97 4.14 75.29 108.05 59.34 88.86 54 E16_Aa NovelBoundary 0 7.11 18.48 3.37 7.69 0.00 8.29 3.93 1.60 0.00 8.27 0.00 12.30 0.00 5.47 4.70 0.00 8.42 0.00 0.00 6.01 9.20 3.12 0.00 55 ER16a ExonRegion 0 10.24 32.83 4.21 41.02 8.23 53.79 28.34 12.03 27.73 11.62 0.00 98.80 71.90 21.96 12.43 23.10 36.31 60.75 9.29 77.92 112.58 54.98 62.89 56 E16_Da NovelBoundary 0 16.89 16.05 9.28 14.45 0.00 0.00 2.12 4.11 0.00 2.87 0.00 0.00 0.00 0.00 0.00 4.36 3.55 0.00 0.00 3.26 7.85 0.00 0.00 57 E16a_E17a KnownJunction 0 10.37 34.66 4.91 15.52 3.31 74.67 20.89 25.10 24.57 16.71 0.00 105.93 40.74 9.83 0.00 42.21 27.12 68.56 7.72 69.54 100.02 55.48 68.21 58 I16_AR1 ActiveIntronRegion 0 1.85 5.81 2.49 18.95 0.00 1.46 3.58 1.46 0.69 0.45 0.00 12.51 6.01 0.00 1.63 0.00 0.00 0.00 1.69 3.03 0.00 1.37 0.00 59 I16_AR2 ActiveIntronRegion 0 2.00 11.09 1.63 21.30 2.87 6.88 6.87 3.65 4.27 1.10 0.00 12.16 4.53 0.81 1.72 0.96 0.00 0.78 1.37 2.08 1.89 3.12 1.57 60 ER17a ExonRegion 0 10.92 26.51 4.14 23.88 4.90 63.08 27.79 20.37 27.69 11.22 0.00 95.94 58.20 22.90 10.48 29.08 53.49 72.19 11.40 73.74 129.84 54.27 73.08 61 E17_Da NovelBoundary 0 29.19 3.03 5.14 1.66 0.00 0.00 0.00 2.14 1.65 4.78 0.00 6.00 26.30 0.00 0.00 4.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62 E17a_E18a KnownJunction 0 15.85 19.08 5.47 35.46 12.56 55.25 35.90 26.66 23.44 8.43 0.00 127.54 70.45 21.13 4.45 22.22 53.39 57.50 24.38 71.46 181.13 74.34 96.63 63 ER18a ExonRegion 0 4.39 22.24 11.25 45.89 7.83 50.12 22.07 18.98 33.49 12.29 2.10 109.39 88.61 23.43 10.43 17.26 17.63 77.76 19.25 70.35 108.71 56.39 57.92 64 E18a_E19a KnownJunction 0 6.45 24.93 16.85 33.20 3.90 81.71 30.43 15.07 26.01 11.95 0.00 97.23 85.38 9.77 4.45 42.55 25.90 70.06 9.41 52.28 92.97 72.38 65.73 65 ER19a ExonRegion 0 9.61 39.17 10.50 37.62 5.54 57.25 20.89 15.71 31.03 12.86 0.00 113.95 72.65 14.29 6.79 29.72 39.28 58.44 10.70 61.34 108.84 51.92 79.99 66 E19_Da NovelBoundary 0 13.11 0.00 1.15 17.25 12.05 2.90 12.59 2.30 2.89 2.34 2.37 5.85 6.66 2.30 0.00 0.00 0.00 2.32 4.14 0.00 7.97 0.00 11.95 67 E19a_E20a KnownJunction 0 10.82 43.41 8.54 36.19 3.74 53.44 32.68 28.42 22.89 9.89 0.00 107.59 67.85 20.01 4.45 11.62 21.97 49.58 21.55 87.76 85.31 53.09 58.47 68 E20_Aa NovelBoundary 0 0.00 2.63 2.93 20.88 0.00 2.21 0.00 5.09 5.38 2.44 0.00 5.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.39 2.66 0.00 7.09 69 ER20a ExonRegion 0 10.80 41.58 18.33 44.05 14.27 79.58 22.69 13.34 29.99 10.89 0.00 117.38 52.54 18.09 10.76 21.11 27.21 51.59 10.68 60.00 87.90 47.67 53.27 70 E20a_E21a KnownJunction 0 6.59 31.44 7.92 28.33 15.20 61.50 28.31 12.69 32.46 10.29 0.00 128.59 61.52 11.95 8.90 19.82 37.03 43.40 4.42 60.15 75.43 54.38 44.13 71 I20 Intron 0 3.74 7.77 3.32 16.76 2.99 5.21 5.55 3.48 3.43 2.55 1.26 4.39 7.68 1.03 1.57 2.08 2.46 1.16 1.19 3.77 2.16 2.62 2.74 72 I20_SR1 SilentIntronRegion 0 3.94 8.18 3.50 17.64 3.15 5.49 5.85 3.67 3.61 2.68 1.33 4.63 8.08 1.09 1.65 2.19 2.59 1.22 1.25 3.97 2.27 2.76 2.88 73 E21_Aa NovelBoundary 0 3.19 8.29 8.87 25.34 3.90 17.83 7.33 6.61 6.60 1.48 0.00 0.00 6.17 0.00 0.00 4.36 0.00 7.83 0.00 9.27 3.15 2.33 0.00 74 ER21a ExonRegion 0 18.63 42.07 15.40 55.25 13.06 61.12 27.68 17.66 31.43 11.79 0.59 163.35 110.19 21.16 9.25 28.93 39.13 48.60 8.12 74.10 109.59 59.56 79.50 75 E21_Da NovelBoundary 0 17.41 9.93 4.38 18.88 4.33 11.47 21.15 6.53 5.24 4.57 0.00 6.30 6.82 0.00 4.45 8.54 9.07 8.12 3.58 3.26 6.30 3.12 4.35 76 E21a_E22a KnownJunction 1 10.45 56.04 9.58 37.89 4.33 65.98 21.99 22.63 38.31 13.32 0.00 163.55 108.60 29.61 4.45 17.77 70.87 58.70 8.28 93.64 102.98 73.97 71.71 77 ER22a ExonRegion 0 16.87 55.81 10.62 39.37 11.97 76.52 28.25 14.68 38.35 8.15 0.00 160.03 138.49 24.71 12.21 17.47 40.45 49.87 14.54 65.64 107.69 70.09 72.56 78 E22_Da NovelBoundary 0 0.00 2.63 1.51 17.81 0.00 10.33 25.61 4.07 6.57 1.24 0.00 18.76 21.10 0.00 5.69 4.02 4.77 3.32 0.00 15.21 0.00 2.51 7.60 79 E22a_E23a KnownJunction 1 14.15 67.95 8.54 21.01 28.52 55.71 29.06 18.40 38.77 6.31 0.00 135.64 127.10 23.25 14.83 7.69 42.45 29.80 9.60 52.16 79.08 56.52 77.34 80 I22_AR1 ActiveIntronRegion 0 1.71 7.20 1.42 13.95 1.30 8.47 8.96 5.64 2.31 2.58 0.00 14.08 16.54 0.73 3.65 0.60 0.67 1.61 4.49 6.62 1.48 4.50 2.37 81 E23_Aa NovelBoundary 0 0.00 9.27 8.75 20.98 4.24 10.28 6.76 8.95 3.41 6.66 0.00 18.76 13.15 3.00 0.00 0.00 9.35 2.57 4.52 14.51 11.98 3.06 0.00 82 ER23a ExonRegion 0 7.67 35.39 9.78 44.46 21.50 73.10 33.46 15.36 38.84 11.22 0.00 148.09 119.03 20.77 12.01 22.74 27.78 32.56 10.77 53.49 86.26 72.94 67.60 83 E23a_E24a KnownJunction 0 0.00 26.71 6.86 29.07 11.71 97.73 27.65 20.50 32.18 8.17 0.00 153.80 78.73 14.83 15.08 16.06 8.51 17.20 3.95 37.90 99.28 63.62 58.39 84 ER24a ExonRegion 0 5.90 34.58 7.10 59.86 16.69 80.16 30.30 21.25 44.49 12.52 0.26 149.29 91.75 15.78 7.13 26.49 32.16 37.87 12.51 58.57 80.70 82.22 55.99 85 IG24 Intergenic 0 15.51 61.32 23.28 85.20 20.89 92.20 45.51 28.56 44.72 20.36 0.15 141.48 106.54 10.80 11.65 16.28 20.73 22.99 11.55 47.96 38.13 94.25 45.12 86 IG24_AR1 ActiveIntergenicRegion 0 18.32 74.32 27.91 102.77 24.34 111.19 54.46 34.28 54.09 24.22 0.13 171.68 129.06 13.17 13.76 19.50 25.04 27.83 14.01 57.97 46.38 114.65 54.87