Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HRK Gene 0 1.09 7.00 4.95 5.06 5.10 6.05 3.59 7.36 23.87 10.77 0.28 0.00 0.00 0.12 0.15 0.00 0.97 105.77 14.94 11.38 0.00 0.31 0.65 2 257572 Transcript 0 0.96 9.22 7.05 7.57 4.76 6.11 5.35 11.40 37.94 16.86 0.21 0.00 0.00 0.11 0.14 0.00 1.95 161.58 26.71 17.62 0.00 1.19 1.87 3 ER1a ExonRegion 0 0.24 0.63 0.86 0.77 0.30 2.14 1.10 2.25 6.13 2.63 0.22 0.00 0.00 0.00 0.00 0.00 1.21 48.55 6.22 5.34 0.00 0.06 0.09 4 E1_Da NovelBoundary 0 3.70 2.57 4.05 0.00 0.00 0.00 0.00 0.00 4.72 6.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63.96 0.00 5.43 0.00 0.00 0.00 5 E1a_E2a KnownJunction 0 0.00 8.22 7.75 8.96 0.00 2.90 6.76 15.12 50.95 22.08 0.00 0.00 0.00 0.00 0.00 0.00 4.11 224.43 42.82 24.93 0.00 2.76 3.84 6 I1 Intron 0 1.24 4.48 2.39 4.81 4.52 1.06 1.18 2.55 6.46 2.22 0.00 0.04 0.09 0.02 0.01 0.05 0.02 31.02 3.38 3.49 0.00 0.00 0.21 7 I1_SR1 SilentIntronRegion 0 0.31 3.19 1.89 2.81 1.74 0.27 1.01 2.27 4.55 1.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33.92 3.91 4.19 0.00 0.00 0.29 8 I1_AR1 ActiveIntronRegion 0 1.35 1.30 5.01 8.44 4.85 0.78 0.35 2.21 8.92 2.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38.36 5.16 5.84 0.00 0.00 0.00 9 I1_SR2 SilentIntronRegion 0 0.78 2.86 1.88 3.22 1.29 0.87 0.10 3.18 5.86 2.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36.50 2.38 2.60 0.00 0.00 0.00 10 I1_AR2 ActiveIntronRegion 0 0.83 0.75 0.94 6.50 2.92 0.46 0.08 2.26 5.20 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.27 3.51 2.79 0.00 0.00 0.00 11 I1_SR4 SilentIntronRegion 0 1.02 4.67 2.31 4.93 5.65 1.31 1.10 2.19 6.15 2.44 0.00 0.12 0.19 0.07 0.00 0.05 0.05 28.77 2.96 3.18 0.00 0.00 0.34 12 I1_SR5 SilentIntronRegion 0 1.86 5.69 2.23 5.36 5.83 1.10 1.85 3.14 8.21 2.77 0.00 0.00 0.07 0.00 0.04 0.12 0.00 33.64 3.70 3.79 0.00 0.00 0.12 13 E2_Aa NovelBoundary 0 7.04 3.16 8.34 4.46 20.37 0.00 4.06 9.41 14.41 7.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39.01 13.18 6.14 0.00 0.00 0.00 14 ER2a ExonRegion 0 2.65 18.81 12.53 13.00 13.98 13.29 8.20 16.83 56.73 25.86 0.40 0.00 0.00 0.34 0.43 0.00 0.51 211.76 31.08 22.58 0.00 0.75 1.67 15 IG46 Intergenic 0 4.68 49.09 17.95 30.82 31.24 14.01 10.88 24.19 55.42 26.89 0.14 0.07 0.56 0.02 0.29 0.40 0.51 194.19 20.64 24.84 0.11 0.17 0.91 16 IG46_AR4 ActiveIntergenicRegion 0 2.96 31.65 8.75 17.76 23.42 13.58 10.86 16.72 51.42 22.78 0.25 0.14 0.76 0.11 0.40 0.00 0.37 218.79 21.60 33.01 0.00 0.29 0.77 17 IG46_SR4 SilentIntergenicRegion 0 3.89 61.48 14.19 27.50 32.24 14.99 12.95 27.66 65.48 35.57 0.00 1.22 0.00 0.00 0.50 0.00 1.06 241.95 25.15 34.41 0.80 0.43 3.30 18 IG46_AR3 ActiveIntergenicRegion 0 6.97 52.96 21.97 33.54 35.89 22.83 14.46 33.81 74.19 36.52 0.00 0.00 0.70 0.00 0.00 0.27 0.90 391.07 27.07 30.70 0.10 0.38 1.17 19 IG46_SR3 SilentIntergenicRegion 0 3.08 37.05 12.49 29.29 35.63 17.14 11.91 25.76 73.71 24.24 0.88 0.00 0.00 0.00 0.00 0.00 1.03 228.03 26.90 25.88 0.69 0.65 2.74 20 IG46_AR2 ActiveIntergenicRegion 0 6.15 89.16 30.57 42.41 51.99 19.83 20.12 35.62 89.17 45.94 0.64 0.00 0.53 0.00 0.76 0.00 0.91 305.24 29.77 39.35 0.61 0.29 1.62 21 IG46_SR2 SilentIntergenicRegion 0 3.59 66.64 14.21 28.32 38.71 12.15 11.59 25.58 63.75 29.05 0.01 0.00 1.16 0.00 0.41 0.00 0.40 192.47 24.25 23.97 0.00 0.00 0.88 22 IG46_AR1 ActiveIntergenicRegion 0 8.51 68.88 36.06 60.63 44.66 18.97 11.51 37.42 69.76 36.65 0.00 0.00 0.39 0.00 0.23 0.89 0.30 184.59 24.33 27.78 0.00 0.10 0.54