Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	TBX3	Gene	0	13.13	12.30	21.66	69.18	22.00	19.25	43.73	47.81	60.56	18.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	236.08	35.65	150.15	741.32	731.64	822.27
2	443365	Transcript	0	0.00	1.38	1.67	1.56	7.14	2.20	3.05	1.96	3.33	0.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	13.99	0.51	5.62	108.63	93.09	110.34
3	361100	Transcript	0	1.44	0.00	4.04	6.48	0.00	1.08	1.72	7.21	6.76	1.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	36.85	5.27	19.62	83.31	63.56	89.03
4	257566	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	349155	Transcript	0	11.26	15.79	28.03	120.20	36.59	32.82	70.17	75.82	105.96	17.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	315.09	126.03	398.14	817.01	1117.88	1508.37
6	IG37_AR1	ActiveIntergenicRegion	0	0.36	0.35	0.63	1.40	2.30	0.63	5.00	3.41	3.48	0.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.08	3.37	32.13	202.18	107.94	271.52
7	ER1a	ExonRegion	0	2.39	5.27	9.94	24.32	9.79	11.81	25.93	24.72	36.70	12.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	233.43	40.64	132.73	775.45	541.12	828.03
8	E1a_E2a	KnownJunction	0	3.78	5.53	19.31	62.60	18.68	14.25	25.48	55.41	84.35	14.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	492.96	56.57	214.63	1252.78	642.22	1259.36
9	ER2a	ExonRegion	0	5.01	7.33	27.57	83.78	22.64	18.76	48.97	77.91	110.77	22.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	468.78	80.24	290.87	1350.44	1243.50	1674.11
10	E2_Da	KnownBoundary	0	0.00	0.00	3.31	5.66	0.00	2.44	2.25	3.37	10.62	1.58	0.00	0.00	0.00	0.00	0.00	0.00	0.00	23.59	4.05	14.45	171.00	166.49	200.18
11	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	3.46	3.82	0.00	8.04	16.22	31.65	6.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	84.94	25.41	27.10	305.06	418.53	373.89
12	E2a_E4a	KnownJunction	0	11.26	15.79	28.03	120.20	36.59	32.82	70.17	75.82	105.96	17.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	315.09	126.03	398.14	817.01	1117.88	1508.37
13	ER2b	ExonRegion	0	0.00	1.38	1.67	1.56	7.14	2.20	3.05	1.96	3.33	0.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	13.99	0.51	5.62	108.63	93.09	110.34
14	I2	Intron	0	0.78	1.50	0.90	5.11	6.73	2.93	10.24	6.32	9.04	2.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.92	4.30	11.23	117.09	158.56	102.02
15	I2_AR1	ActiveIntronRegion	0	0.78	1.50	0.90	5.12	6.75	2.93	10.26	6.34	9.06	2.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.95	4.31	11.26	117.37	158.94	102.26
16	ER3a	ExonRegion	0	3.17	1.97	0.12	3.54	3.17	9.02	13.42	17.72	22.56	6.46	0.00	0.00	0.00	0.00	0.00	0.00	0.00	66.46	12.48	32.94	303.93	409.10	355.58
17	E3a_E4a	KnownJunction	0	0.00	6.51	0.00	1.76	4.07	5.79	2.25	21.81	21.21	6.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	52.27	4.80	43.21	276.95	371.50	410.26
18	I3	Intron	0	1.71	1.64	0.37	1.64	3.78	4.07	4.80	7.27	8.53	1.38	0.00	0.00	0.00	0.00	0.00	0.00	0.00	20.92	5.14	11.15	154.10	137.36	125.51
19	I3_AR1	ActiveIntronRegion	0	1.72	1.65	0.37	1.65	3.81	4.10	4.84	7.33	8.60	1.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	21.09	5.18	11.24	155.32	138.45	126.51
20	E4_Aa	NovelBoundary	0	0.00	0.00	1.83	5.29	8.06	16.98	16.61	24.64	26.65	4.16	0.00	0.00	0.00	0.00	0.00	0.00	0.00	46.34	4.61	37.90	275.47	304.15	285.54
21	ER4a	ExonRegion	0	13.76	18.73	23.39	114.98	34.53	22.50	66.64	92.54	134.02	25.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	365.55	69.12	328.57	1106.11	1411.80	1587.25
22	E4a_E5a	KnownJunction	0	51.34	21.51	27.79	147.97	52.46	55.03	93.54	105.72	152.54	35.38	0.00	0.00	0.00	0.00	0.00	0.00	0.00	436.17	108.52	372.32	1159.75	1881.71	1866.64
23	ER5a	ExonRegion	0	19.90	10.72	28.82	123.31	33.99	31.63	64.50	88.15	124.60	35.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	450.71	54.28	315.39	1379.69	1432.05	1633.73
24	E5a_E6a	KnownJunction	0	15.56	13.29	37.93	140.51	40.49	38.10	48.93	100.30	125.35	28.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	597.84	61.55	274.01	1588.98	1325.64	1759.68
25	ER6a	ExonRegion	0	5.29	12.45	24.50	90.56	16.24	16.77	40.36	64.76	100.71	27.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	511.13	53.22	206.58	1495.55	1041.52	1284.74
26	E6a_E7a	KnownJunction	0	17.11	25.52	30.16	76.01	8.66	28.51	27.03	69.87	69.99	19.64	0.00	0.00	0.00	0.00	0.00	0.00	0.00	469.17	43.58	204.92	1449.24	913.91	1290.69
27	ER7a	ExonRegion	0	6.37	6.56	14.52	26.17	7.24	10.58	16.75	27.68	39.36	18.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	344.77	23.53	124.04	893.50	444.01	672.07
28	E7_Da	KnownBoundary	0	0.00	0.00	14.07	21.84	3.14	5.74	23.14	17.13	42.10	13.08	0.00	0.00	0.00	0.00	0.00	0.00	0.00	252.41	16.57	77.79	580.52	192.76	285.28
29	E7a_E8b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.41	0.00	0.00
30	ER7b	ExonRegion	0	2.91	3.51	14.72	23.94	4.97	8.11	10.32	35.80	44.77	15.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	343.39	30.83	114.38	813.38	479.15	694.85
31	E7_Db	NovelBoundary	0	0.00	0.00	1.83	4.76	0.00	0.00	1.99	7.35	7.32	2.74	0.00	0.00	0.00	0.00	0.00	0.00	0.00	111.01	4.52	49.28	112.13	95.83	131.12
32	E7b_E8a	KnownJunction	0	9.85	3.16	25.46	57.83	7.98	15.50	13.56	44.36	84.92	26.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	652.68	39.44	172.83	1253.40	993.45	1278.74
33	I7	Intron	0	0.96	1.77	3.88	8.21	2.05	2.37	5.86	5.84	6.54	2.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	67.26	7.11	36.12	88.40	114.90	133.39
34	I7_AR1	ActiveIntronRegion	0	0.96	0.74	4.82	7.01	1.52	1.57	6.26	9.08	6.90	3.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	84.59	12.05	39.99	101.94	128.21	159.11
35	I7_SR2	SilentIntronRegion	0	0.40	2.06	2.91	10.54	2.53	3.95	3.74	5.03	6.20	2.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	89.48	9.61	41.53	133.32	99.38	151.85
36	I7_AR2	ActiveIntronRegion	0	0.55	1.48	5.63	13.23	2.58	2.98	5.24	5.66	7.54	3.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	87.71	4.85	43.71	98.68	117.89	153.58
37	E8_Aa	NovelBoundary	0	3.78	0.00	5.26	15.05	3.31	10.90	4.46	6.90	9.58	4.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	143.59	0.00	37.52	150.74	175.25	180.37
38	ER8a	ExonRegion	0	6.17	2.60	14.32	19.18	3.85	7.20	12.82	26.88	38.23	16.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	209.49	25.68	102.80	879.36	501.21	698.53
39	E8_Ab	KnownBoundary	0	3.70	0.00	24.07	38.86	0.00	7.50	15.85	33.15	50.69	14.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	110.47	13.46	56.69	394.63	320.99	310.04
40	ER8b	ExonRegion	0	1.17	4.86	17.97	23.74	6.40	11.58	14.35	35.35	33.90	12.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	164.10	23.07	102.01	742.06	350.45	526.05
41	E8_Da	KnownBoundary	0	0.00	3.35	20.70	29.23	0.00	13.40	7.91	28.92	21.01	11.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	270.07	9.41	86.74	568.97	168.09	475.13
42	E8a_E8c	KnownJunction	0	2.89	0.00	8.07	12.95	0.00	2.16	3.44	14.42	13.51	3.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	73.70	10.54	39.25	164.20	127.12	178.07
43	ER8c	ExonRegion	0	0.69	1.99	17.18	16.41	0.05	6.31	10.18	20.04	14.75	4.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	103.76	18.81	60.84	417.52	240.13	431.52
44	E8_Ac	KnownBoundary	0	3.41	0.00	15.79	39.89	0.00	8.40	22.66	44.65	25.93	11.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	242.54	48.57	104.82	562.79	426.55	612.22
45	ER8d	ExonRegion	0	8.52	3.68	19.37	38.07	2.17	12.27	15.50	39.90	47.06	21.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	260.54	27.12	114.50	938.74	385.36	562.10
46	E8_Db	KnownBoundary	0	13.41	0.00	11.89	52.24	3.48	9.82	31.09	37.62	68.72	17.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	405.37	33.32	170.98	1233.01	514.42	968.79
47	ER8e	ExonRegion	0	30.87	25.02	35.72	132.15	44.61	32.89	79.52	68.91	77.11	23.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	128.88	27.58	148.94	445.13	939.59	703.63