Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CCDC62 Gene 0 4.82 10.79 5.09 12.88 9.72 8.03 9.70 8.66 12.78 8.27 4.93 2.46 3.25 1.82 2.05 2.04 0.68 5.74 3.40 7.15 1.51 1.29 1.03 2 392441 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 341952 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 253079 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 392440 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 IG31_SR1 SilentIntergenicRegion 0 6.82 15.27 12.26 17.63 13.04 8.79 13.09 9.18 12.78 8.16 4.74 2.07 4.34 3.25 4.74 4.43 3.36 7.16 5.93 11.57 1.64 3.16 3.40 7 ER1a ExonRegion 0 0.00 3.73 0.79 0.35 0.00 1.88 1.97 1.87 1.07 0.47 2.20 0.00 0.00 2.15 1.39 0.94 0.93 1.79 0.00 3.36 1.22 0.00 0.00 8 E1a_E2a KnownJunction 0 0.00 3.35 1.83 2.06 0.00 4.66 0.00 2.55 6.39 0.00 0.00 0.00 0.00 2.12 0.00 0.00 0.00 2.45 0.00 9.65 0.00 0.00 0.00 9 E2_Aa NovelBoundary 0 3.78 9.27 16.62 9.06 7.05 2.16 9.19 7.19 11.43 14.48 4.05 0.00 0.00 0.00 10.14 0.00 0.00 9.82 0.00 9.78 0.00 0.00 3.76 10 ER2a ExonRegion 0 4.34 10.81 14.08 15.17 11.72 13.68 11.40 7.29 17.53 9.12 8.36 4.58 6.63 6.22 3.52 6.19 0.87 13.59 3.37 12.35 3.36 2.84 3.10 11 E2_Da NovelBoundary 0 7.11 13.02 12.86 5.73 7.98 8.40 14.84 9.20 9.66 5.56 14.90 0.00 0.00 4.83 0.00 0.00 0.00 1.78 0.00 23.46 7.66 3.12 3.59 12 E2a_E3a KnownJunction 0 3.78 12.10 1.24 9.12 10.95 16.35 6.23 11.17 10.24 7.66 2.68 0.00 0.00 4.94 0.00 0.00 0.00 3.19 0.00 3.07 4.70 2.82 0.00 13 ER3a ExonRegion 0 5.22 8.82 8.63 17.15 9.28 5.05 12.26 11.63 15.77 10.37 6.15 2.36 12.00 1.50 2.83 2.93 0.00 11.09 5.67 12.08 3.84 1.16 0.65 14 E3_Ab KnownBoundary 0 3.70 2.57 17.56 21.78 29.71 7.61 13.43 20.95 19.91 18.51 7.11 0.00 6.01 3.00 0.00 7.52 0.00 17.87 18.82 20.84 3.15 0.00 4.01 15 ER3b ExonRegion 0 3.21 19.17 9.92 17.09 16.50 7.61 19.76 14.31 16.24 12.96 6.66 1.44 2.61 3.22 1.93 3.25 0.00 9.34 8.26 17.10 7.06 2.51 5.17 16 E3_Da KnownBoundary 0 6.15 17.50 6.24 10.35 24.11 14.03 17.53 6.74 11.49 10.53 4.69 6.30 6.49 0.00 0.00 3.93 0.00 3.98 4.61 15.08 2.53 3.06 3.59 17 E3a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3c ExonRegion 0 2.59 11.24 2.96 7.65 11.67 16.10 11.07 5.38 10.09 10.48 2.85 2.89 5.08 0.77 0.00 1.49 0.00 3.23 2.57 12.88 0.80 3.88 3.02 19 E3b_E4a KnownJunction 0 0.00 12.89 1.51 3.60 4.33 18.28 12.28 2.55 8.10 12.14 0.00 0.00 0.00 2.12 0.00 0.00 0.00 3.86 0.00 6.52 0.00 3.12 0.00 20 ER4a ExonRegion 0 2.16 4.80 5.62 11.54 10.05 12.19 9.41 12.34 10.03 6.83 5.70 0.34 3.54 0.64 1.14 2.97 0.00 8.15 12.74 8.47 0.00 0.49 1.58 21 E4a_E5a KnownJunction 0 0.00 2.57 6.03 6.66 12.14 18.91 5.48 5.83 6.45 8.22 9.48 5.85 0.00 2.47 0.00 0.00 0.00 0.00 0.00 9.01 0.00 0.00 0.00 22 ER5a ExonRegion 0 2.21 7.55 3.12 12.95 11.12 10.17 10.87 2.82 11.73 5.87 9.65 2.24 3.93 2.11 1.15 2.30 1.07 3.43 4.72 8.49 0.65 1.82 3.30 23 E5a_E6a KnownJunction 0 3.78 8.68 4.11 11.72 3.23 2.90 19.17 2.05 5.32 2.93 7.05 0.00 6.82 0.00 0.00 4.36 0.00 3.69 0.00 12.40 2.66 0.00 3.16 24 ER6a ExonRegion 0 4.94 12.92 3.33 8.58 5.69 6.49 17.08 0.71 10.01 2.48 6.63 7.34 1.10 0.00 1.02 2.07 3.14 1.41 0.00 5.53 0.99 1.33 0.32 25 E6a_E7a KnownJunction 0 0.00 6.31 3.02 10.06 3.48 16.41 9.14 3.45 1.77 0.00 4.58 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 3.26 0.00 2.76 0.00 26 ER7a ExonRegion 0 8.04 19.70 1.51 13.28 5.95 8.86 13.91 3.98 7.48 5.44 6.04 0.15 4.11 0.77 4.69 0.00 0.00 3.72 0.07 5.07 1.39 0.87 1.68 27 E7a_E8a KnownJunction 0 9.48 15.06 2.57 9.79 11.29 10.33 9.54 4.97 5.30 5.69 4.26 0.00 0.00 0.00 0.00 0.00 0.00 2.07 0.00 5.43 0.00 0.00 0.00 28 ER8a ExonRegion 0 6.00 12.62 1.99 15.21 11.00 12.28 12.98 5.78 10.05 7.76 4.03 3.36 5.74 0.57 1.38 0.00 0.00 3.97 2.75 5.69 0.55 1.83 1.29 29 E8a_E9a KnownJunction 0 3.33 23.22 1.15 13.35 16.04 2.84 42.18 11.71 11.31 8.86 7.69 0.00 6.17 0.00 13.35 0.00 0.00 2.57 0.00 6.07 3.15 0.00 0.00 30 ER9a ExonRegion 0 4.78 19.94 5.21 16.80 9.66 9.59 11.67 9.04 17.77 11.27 7.21 2.00 5.11 3.03 3.56 2.83 0.77 10.10 4.12 12.09 2.38 1.56 1.23 31 E9a_E10a KnownJunction 0 3.56 8.81 10.76 3.90 0.00 7.33 16.91 8.17 13.28 19.80 5.37 0.00 0.00 2.47 5.19 4.27 8.23 4.56 4.80 0.00 0.00 9.31 0.00 32 ER10a ExonRegion 0 6.61 7.19 7.64 12.88 10.52 10.09 9.19 13.37 13.69 9.34 7.05 3.76 0.84 2.68 3.04 5.86 4.19 14.95 3.91 5.85 2.33 2.31 2.07 33 E10_Da NovelBoundary 0 3.33 3.35 10.08 5.33 34.63 16.13 11.31 4.52 9.46 6.02 2.05 0.00 0.00 0.00 0.00 4.27 0.00 0.00 0.00 5.50 0.00 6.25 0.00 34 E10a_E11a KnownJunction 0 11.19 11.97 3.08 12.85 3.48 15.16 2.25 9.53 9.95 11.95 2.63 0.00 6.82 0.00 0.00 3.67 0.00 13.68 0.00 8.82 0.00 5.94 0.00 35 ER11a ExonRegion 0 2.10 4.58 4.41 11.45 6.01 3.45 7.93 7.46 8.46 8.66 3.02 1.47 4.44 1.95 1.39 4.02 0.07 6.05 2.21 5.15 1.50 0.81 0.00 36 E11_Da NovelBoundary 0 0.00 3.03 3.64 13.12 0.00 0.00 4.50 5.09 10.53 7.28 0.00 0.00 13.31 0.00 0.00 0.00 0.00 19.32 0.00 11.12 0.00 0.00 7.17 37 E11a_E12a KnownJunction 0 0.00 2.63 0.00 1.47 6.79 5.00 0.00 2.05 6.19 1.67 0.00 0.00 0.00 0.00 0.00 7.95 0.00 1.58 0.00 0.00 0.00 0.00 0.00 38 E11a_E13a KnownJunction 0 3.70 0.00 0.00 0.00 6.54 0.00 4.37 4.27 4.69 6.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 ER12a ExonRegion 0 0.00 0.19 0.00 1.80 7.94 2.67 5.52 1.58 9.96 0.51 1.77 0.00 2.10 1.45 1.11 1.26 0.18 1.79 0.00 1.15 0.77 0.00 0.00 40 E12a_E13a KnownJunction 0 0.00 0.00 0.00 2.06 8.66 0.00 4.42 2.34 7.64 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.00 0.00 3.03 0.00 0.00 41 ER13a ExonRegion 0 7.46 3.31 1.01 15.87 9.52 10.23 9.13 9.74 12.89 8.17 2.11 1.72 1.75 0.35 1.95 0.70 0.77 1.70 1.66 3.34 0.78 0.54 0.00 42 E13_Da KnownBoundary 0 7.11 11.84 2.34 27.64 8.15 10.62 14.04 5.30 11.23 18.16 4.53 0.00 6.66 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 E13a_E13b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER13b ExonRegion 0 6.85 9.33 6.63 13.75 14.57 6.64 8.04 14.21 14.73 10.72 2.52 3.96 1.02 0.40 0.93 0.02 0.00 0.91 3.26 3.79 0.36 1.12 0.00 45 E13_Ab KnownBoundary 0 2.96 3.09 3.55 1.23 0.00 0.00 1.68 9.73 3.07 4.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 4.61 0.00 0.00 3.06 0.00 46 ER13c ExonRegion 0 6.43 3.95 2.75 5.34 1.89 0.61 2.78 4.63 0.42 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.58 4.03 0.00 0.83 0.28 0.00 47 IG32_AR1 ActiveIntergenicRegion 0 4.25 23.94 5.22 7.52 1.13 12.42 1.40 7.75 12.65 3.07 0.49 0.00 0.00 0.53 1.48 0.31 1.40 19.62 6.07 22.06 5.36 1.54 1.55