Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GATC Gene 0 36.51 48.45 50.30 41.58 52.13 138.14 117.47 47.00 48.42 59.59 100.26 32.08 37.06 111.08 112.62 123.19 114.69 88.88 67.19 65.21 95.68 49.64 55.39 2 229384 Transcript 0 30.87 64.49 49.04 48.54 50.26 179.40 165.74 45.33 47.05 59.35 86.41 45.01 58.87 113.38 100.41 135.74 98.77 88.39 71.94 56.05 73.36 49.97 62.47 3 ER1a ExonRegion 1 20.12 11.72 16.61 6.26 17.21 61.01 33.93 4.01 6.50 12.06 35.36 6.95 1.97 30.10 38.33 42.75 26.16 16.88 31.22 9.17 28.05 9.88 8.77 4 E1a_E2a KnownJunction 0 6.22 5.46 29.36 12.32 25.55 17.77 25.70 5.75 13.66 22.89 11.37 17.86 18.99 19.78 19.04 35.55 30.20 28.15 41.70 17.19 22.43 9.25 10.67 5 ER2a ExonRegion 1 12.56 11.12 54.35 30.49 6.77 12.42 20.52 46.98 51.52 63.10 96.03 13.09 5.10 99.16 133.93 146.30 141.84 99.28 69.71 70.62 123.73 47.86 60.63 6 E2_Da NovelBoundary 0 0.00 0.00 34.42 20.41 0.00 7.38 8.13 6.65 11.17 16.49 2.68 0.00 5.68 7.42 18.42 27.43 4.77 27.77 16.00 26.01 2.66 0.00 8.37 7 E2a_E3a KnownJunction 1 27.93 12.43 64.52 44.05 28.01 35.89 29.10 51.75 62.33 68.98 76.70 28.96 31.17 131.14 125.35 415.96 92.85 197.86 124.24 77.28 92.30 59.15 159.71 8 I2 Intron 0 10.17 16.42 11.11 17.70 16.11 7.99 17.13 7.76 7.78 8.43 4.09 7.82 8.40 4.23 10.99 9.52 5.30 5.95 9.59 10.91 1.41 2.00 6.21 9 I2_SR1 SilentIntronRegion 0 11.55 18.35 12.49 20.10 17.90 8.54 18.49 8.81 8.83 9.43 4.22 8.88 9.53 4.43 11.37 9.95 6.01 6.62 10.66 11.61 1.28 2.12 7.05 10 I2 Intron 0 16.94 27.90 24.16 41.22 35.73 19.75 38.67 26.23 22.11 26.58 7.42 17.50 19.89 11.47 19.27 16.31 12.00 22.14 20.98 31.43 5.29 4.91 12.56 11 I2_AR2 ActiveIntronRegion 0 16.44 26.46 27.45 41.16 38.19 17.68 38.23 28.00 19.74 32.92 7.40 21.61 18.97 12.04 17.45 13.80 12.37 26.35 24.14 29.18 8.62 2.28 9.96 12 I2_SR2 SilentIntronRegion 0 12.19 18.30 14.38 31.56 26.89 16.06 35.07 21.29 17.53 20.02 4.90 14.45 15.05 8.34 17.86 16.45 8.27 14.79 14.73 24.59 3.09 4.82 10.70 13 I2_SR3 SilentIntronRegion 0 20.33 40.65 32.96 52.41 47.65 22.26 43.49 31.22 27.56 30.06 10.71 19.24 27.70 14.92 26.60 19.37 11.70 32.97 27.95 41.01 7.23 6.01 16.75 14 I2_AR4 ActiveIntronRegion 0 27.46 39.89 35.46 61.82 47.43 35.96 57.11 36.75 33.88 40.09 8.37 24.03 26.12 15.66 20.69 23.72 25.62 24.32 24.77 41.93 4.24 9.23 16.72 15 E3_Aa NovelBoundary 1 48.38 55.12 46.18 78.11 48.39 42.70 95.66 59.80 49.74 33.04 12.11 43.96 32.30 10.07 30.16 33.41 17.39 49.91 23.34 43.78 5.75 17.64 36.96 16 ER3a ExonRegion 0 97.40 116.46 85.76 87.40 153.86 347.93 280.74 87.62 83.58 102.35 163.42 60.49 91.32 187.87 138.51 187.07 156.92 154.98 101.87 114.12 130.89 85.14 97.25 17 E3_Da NovelBoundary 0 29.93 33.94 52.87 72.39 43.29 18.17 28.66 34.42 24.91 22.21 7.00 18.16 0.00 5.00 33.75 8.37 31.51 53.93 4.05 49.86 2.72 5.20 11.27 18 E3a_E4a KnownJunction 1 31.64 201.28 73.71 117.43 66.47 526.06 528.98 88.14 78.44 109.19 132.67 111.04 174.99 202.54 141.91 77.16 164.94 86.31 88.94 66.73 77.72 91.91 72.90 19 I3 Intron 0 19.89 20.52 15.55 30.12 38.96 14.84 32.64 18.95 15.67 12.84 5.21 11.41 12.55 7.68 13.98 13.85 13.86 15.54 21.84 22.62 5.94 4.09 13.01 20 I3_SR1 SilentIntronRegion 0 20.32 20.97 15.88 30.77 39.80 15.16 33.34 19.36 16.01 13.12 5.32 11.66 12.82 7.84 14.28 14.15 14.16 15.88 22.31 23.11 6.07 4.18 13.29 21 E4_Aa NovelBoundary 0 43.34 35.13 6.83 4.03 34.89 49.40 142.87 12.20 4.69 17.62 10.32 6.30 15.10 10.18 0.00 3.85 12.62 4.06 4.05 26.91 2.78 3.00 0.00 22 ER4a ExonRegion 0 20.21 92.97 18.98 41.86 53.92 254.69 241.19 33.04 33.35 36.87 89.28 76.71 88.58 123.07 105.81 45.37 78.47 35.28 45.92 37.25 38.42 46.58 27.37 23 IG38 Intergenic 0 59.65 131.31 110.90 135.17 167.71 152.32 197.14 122.30 104.34 126.08 156.72 202.03 193.37 186.88 157.16 171.01 158.37 83.33 134.30 110.34 79.37 124.78 79.05 24 IG38_AR1 ActiveIntergenicRegion 0 59.75 131.55 111.10 135.41 168.00 152.58 197.48 122.51 104.52 126.30 156.98 202.38 193.70 187.21 157.44 171.31 158.65 83.47 134.53 110.53 79.51 124.99 79.19