Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HCFC2 Gene 0 26.61 59.60 21.89 59.41 66.46 87.02 100.06 51.35 51.57 52.14 29.08 54.25 51.31 31.51 20.52 27.06 30.61 27.55 5.05 37.07 30.87 41.43 25.43 2 229330 Transcript 0 28.91 47.95 21.40 33.39 58.85 95.31 100.93 46.45 53.03 47.12 52.78 67.29 72.24 57.35 34.00 46.01 58.80 43.98 6.23 46.50 67.79 49.65 41.35 3 IG16_AR10 ActiveIntergenicRegion 0 0.46 2.21 1.36 1.86 2.32 4.49 1.44 1.62 3.51 1.02 0.43 1.55 0.00 3.71 1.52 3.23 0.58 3.53 0.69 6.01 11.82 5.04 2.29 4 ER1a ExonRegion 0 3.25 11.43 2.41 3.68 7.59 39.15 33.09 5.28 10.89 11.51 19.71 3.24 8.11 9.15 3.72 13.11 27.03 16.82 2.47 12.04 40.43 10.12 10.93 5 E1a_E2a KnownJunction 0 0.00 3.09 10.70 12.45 11.63 25.10 13.78 32.98 45.46 36.85 46.96 11.85 6.82 30.55 18.54 21.36 61.62 65.54 8.75 74.72 84.26 27.00 23.90 6 ER2a ExonRegion 0 4.35 12.77 10.95 13.57 32.41 66.71 59.16 25.36 39.65 34.17 41.52 22.14 25.50 42.68 17.70 44.00 42.60 77.87 5.28 50.72 39.79 32.89 43.75 7 E2a_E3a KnownJunction 0 0.00 40.06 8.99 10.79 52.55 220.21 229.16 36.72 60.97 40.72 59.70 17.86 68.66 52.98 15.95 42.13 58.44 42.12 9.60 42.57 60.42 30.74 47.80 8 ER3a ExonRegion 0 10.87 46.84 15.28 17.77 35.78 75.94 72.92 28.59 53.57 38.21 56.41 54.83 41.66 52.41 16.79 38.53 66.69 29.61 9.10 43.43 58.88 36.93 33.05 9 E3_Da NovelBoundary 0 3.78 0.00 5.32 1.60 4.16 5.22 31.27 4.52 18.43 5.45 0.00 0.00 6.49 0.00 0.00 3.85 21.79 0.00 3.95 4.86 0.00 0.00 0.00 10 E3a_E4a KnownJunction 0 16.82 43.87 11.86 11.85 47.20 65.53 59.58 35.24 57.84 45.07 67.86 108.49 68.99 49.50 29.79 41.53 70.97 28.98 9.13 26.08 74.07 59.76 35.77 11 ER4a ExonRegion 1 15.67 43.77 18.74 27.94 45.82 58.33 75.82 50.70 53.15 38.14 63.49 72.54 79.37 63.40 14.80 48.18 67.87 41.19 6.29 43.04 65.44 49.77 45.78 12 E4a_E5a KnownJunction 0 22.60 39.80 17.18 35.63 81.83 86.54 88.28 63.75 44.91 42.25 37.06 76.22 66.39 66.57 23.24 48.45 68.26 31.42 0.00 52.03 49.85 48.56 63.94 13 ER5a ExonRegion 1 14.94 50.46 14.57 29.76 41.02 77.77 89.17 51.91 45.05 35.34 38.75 87.00 67.98 51.65 12.29 45.81 63.57 37.78 0.00 44.96 59.01 45.00 47.64 14 E5a_E6a KnownJunction 0 6.15 51.83 16.11 22.27 43.63 73.82 74.94 39.84 46.82 37.69 47.59 55.97 74.35 49.68 23.86 47.34 83.96 52.23 0.00 34.32 56.53 69.26 29.45 15 ER6a ExonRegion 0 13.15 53.73 25.55 24.49 29.78 63.81 72.32 46.57 60.53 45.15 54.16 65.83 71.84 66.94 22.18 49.00 62.07 59.25 7.11 44.32 60.65 51.87 40.89 16 E6a_E7a KnownJunction 0 34.97 49.99 47.87 38.26 25.30 91.03 92.65 52.49 62.09 85.80 47.17 49.67 67.69 78.82 45.24 65.97 44.04 68.36 15.81 55.42 38.67 66.07 51.13 17 ER7a ExonRegion 0 21.80 56.45 28.79 35.06 47.65 83.87 114.47 43.25 55.16 62.96 53.90 83.27 60.70 78.51 36.83 58.69 71.21 69.05 9.32 58.56 76.13 40.91 44.07 18 E7a_E8a KnownJunction 0 18.60 86.37 29.80 41.65 44.91 90.52 105.24 47.44 69.39 61.19 43.59 32.26 66.07 93.71 48.33 70.75 83.59 49.41 8.09 55.22 100.33 59.27 39.44 19 E7a_E9a NovelJunction 0 0.00 3.35 0.00 3.63 0.00 8.18 6.67 2.51 6.68 6.96 11.32 0.00 7.47 2.47 0.00 0.00 0.00 2.49 0.00 3.26 4.88 7.65 3.41 20 ER8a ExonRegion 0 22.26 29.35 21.76 37.11 40.68 67.39 73.73 47.21 56.67 52.22 58.85 87.13 69.82 86.25 48.27 70.50 77.96 86.28 11.09 51.87 97.19 47.49 50.85 21 E8a_E9a KnownJunction 0 26.45 42.16 11.50 21.84 118.00 83.47 94.68 39.43 60.16 37.50 56.59 55.22 54.38 63.92 38.82 47.08 86.49 41.04 0.00 52.99 83.34 61.54 54.38 22 E9_Aa NovelBoundary 0 3.70 0.00 4.97 3.63 3.57 4.60 41.87 4.35 1.79 3.01 2.68 0.00 8.28 0.00 0.00 0.00 4.30 0.00 4.24 0.00 0.00 0.00 0.00 23 ER9a ExonRegion 0 26.40 41.71 12.00 29.34 67.35 106.26 119.48 52.47 51.32 45.08 62.76 68.29 78.23 65.55 36.84 50.53 70.88 36.01 10.10 41.83 66.03 56.49 58.62 24 E9a_E10a KnownJunction 0 42.97 60.98 11.44 35.79 90.66 108.80 173.82 62.64 43.46 49.48 60.86 66.77 130.19 72.11 62.92 63.57 86.49 37.02 21.65 63.53 62.58 87.56 70.77 25 E10_Aa NovelBoundary 0 9.85 2.96 0.00 5.49 4.16 15.84 47.61 8.83 5.12 1.29 0.00 0.00 6.82 0.00 0.00 0.00 3.83 0.00 0.00 8.63 0.00 0.00 0.00 26 ER10a ExonRegion 0 36.74 39.83 23.47 44.51 60.76 118.38 128.15 60.43 59.57 62.75 67.67 101.45 110.08 62.08 42.98 52.80 68.28 36.58 6.42 50.78 40.90 67.69 44.73 27 E10a_E11a KnownJunction 0 21.86 30.13 24.04 44.12 65.37 121.07 150.37 56.89 54.08 53.08 69.65 77.13 156.16 40.08 42.15 54.60 73.87 42.66 9.32 43.72 54.24 51.62 14.51 28 I10_SR1 SilentIntronRegion 0 0.00 0.00 0.00 0.00 0.00 0.23 2.57 0.00 0.00 0.00 0.00 14.88 10.26 0.00 1.81 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 29 ER11a ExonRegion 0 28.74 45.14 28.21 40.96 58.09 109.95 122.89 54.49 64.68 52.95 73.47 118.04 128.45 57.70 40.85 54.43 69.35 53.27 4.43 58.63 75.12 51.18 37.18 30 E11_Da NovelBoundary 0 0.00 2.83 4.85 5.49 7.39 2.67 17.22 15.32 1.36 2.47 4.90 18.01 13.64 0.00 0.00 10.77 3.46 3.98 0.00 0.00 5.19 11.39 0.00 31 E11a_E12a KnownJunction 0 48.82 59.46 20.96 36.73 112.82 84.38 121.27 37.91 61.78 35.75 57.33 93.48 99.67 44.68 37.46 19.65 46.00 44.73 0.00 69.86 117.13 35.88 27.32 32 ER12a ExonRegion 0 44.68 44.35 19.06 30.17 54.53 98.98 107.72 29.97 59.04 42.62 46.55 109.70 81.57 50.85 42.62 46.23 40.32 26.17 4.26 41.26 88.60 26.02 35.91 33 E12_Da NovelBoundary 0 6.67 11.91 1.39 4.33 7.89 21.18 63.24 22.43 28.91 10.66 19.22 36.31 26.78 15.01 0.00 3.76 4.77 20.19 4.80 20.13 19.03 11.39 3.50 34 E12a_E13a KnownJunction 0 62.16 40.91 26.14 19.64 48.90 130.49 68.72 42.10 51.30 41.96 38.38 100.98 75.16 59.45 50.31 46.74 35.34 19.81 3.67 19.81 101.44 16.90 35.34 35 I12 Intron 0 9.45 14.70 3.27 18.26 24.92 24.89 46.17 12.41 15.25 14.36 9.26 25.40 22.88 8.49 4.82 6.64 8.92 7.62 1.31 14.31 6.54 16.47 8.02 36 I12_SR1 SilentIntronRegion 0 3.09 9.28 1.33 12.23 14.88 14.56 31.65 8.46 12.09 10.92 6.35 29.65 20.26 6.82 3.07 5.15 6.02 3.36 1.74 14.96 7.64 14.07 4.82 37 I12_AR1 ActiveIntronRegion 0 6.33 14.89 3.65 13.24 24.35 20.54 45.55 8.83 9.26 9.36 6.25 22.65 23.20 9.39 6.55 5.38 5.20 4.22 1.22 12.89 2.95 13.46 6.41 38 I12_SR2 SilentIntronRegion 0 13.62 17.95 3.60 32.55 26.95 34.54 57.48 17.99 21.34 18.87 7.61 26.01 31.06 9.02 2.79 4.53 11.20 10.44 0.00 11.92 4.58 19.87 10.38 39 I12_AR2 ActiveIntronRegion 0 17.22 13.40 1.23 26.82 48.29 39.72 52.75 22.71 32.08 22.65 11.20 22.93 17.59 11.37 4.42 9.59 3.83 12.51 0.00 16.73 9.42 20.60 12.15 40 I12_AR3 ActiveIntronRegion 0 21.18 22.34 6.25 26.61 40.10 42.34 66.09 20.53 24.76 24.81 20.59 24.49 23.38 9.66 6.90 12.78 19.22 18.13 1.95 18.10 11.90 23.41 14.25 41 E13_Aa NovelBoundary 1 84.76 25.26 9.20 44.75 62.99 58.89 149.40 40.54 19.59 26.43 9.69 24.76 67.69 9.77 4.45 12.05 17.39 25.70 0.00 6.39 17.54 7.78 15.62 42 ER13a ExonRegion 0 57.96 59.68 22.05 37.72 62.22 132.33 107.14 40.68 50.56 45.92 47.66 106.57 73.58 68.47 42.68 48.39 41.95 31.61 2.10 32.79 85.10 47.94 41.75 43 E13_Da NovelBoundary 0 10.30 15.13 12.42 18.21 3.99 11.47 29.19 4.39 5.27 4.38 2.68 18.91 6.82 9.77 10.38 3.25 9.44 3.65 0.00 9.20 2.66 0.00 0.00 44 E13a_E14a KnownJunction 0 81.35 77.62 23.21 46.48 90.07 108.01 126.08 48.30 53.44 56.95 53.38 80.13 40.26 70.28 49.08 27.26 30.39 35.69 4.71 46.60 88.59 57.07 39.78 45 E14_Aa NovelBoundary 0 23.12 3.35 2.48 10.12 20.37 2.73 22.74 13.27 4.92 3.44 2.00 14.10 0.00 5.12 5.69 0.00 8.32 3.61 0.00 14.06 0.00 3.12 0.00 46 ER14a ExonRegion 0 61.69 75.56 38.17 62.71 92.13 121.32 138.10 67.88 51.41 59.75 70.04 81.40 81.17 58.16 55.53 51.37 44.54 50.92 7.47 57.15 72.51 62.89 55.86 47 E14a_E15a KnownJunction 1 65.42 82.88 56.80 79.04 119.27 166.15 108.64 89.58 61.86 58.53 75.33 20.71 100.81 60.39 51.55 51.27 47.03 48.29 0.00 47.68 58.50 101.28 58.30 48 I14 Intron 0 5.05 3.59 3.39 2.33 14.90 9.08 24.35 6.60 3.58 1.51 2.56 3.92 8.17 1.72 1.19 2.63 3.50 2.52 0.56 5.64 0.00 2.39 0.52 49 I14_SR1 SilentIntronRegion 0 5.07 3.61 3.40 2.34 14.95 9.11 24.43 6.63 3.59 1.52 2.57 3.93 8.20 1.73 1.20 2.64 3.51 2.53 0.57 5.66 0.00 2.40 0.52 50 ER15a ExonRegion 0 27.73 70.22 22.91 76.86 78.64 88.69 105.58 57.05 53.12 56.99 14.09 43.26 41.20 16.50 14.69 15.09 14.35 15.77 4.42 32.52 10.33 40.03 16.44 51 IG17 Intergenic 0 6.98 8.02 2.64 10.89 14.70 13.12 23.92 5.98 5.94 7.36 1.53 3.11 6.01 2.55 3.68 3.34 3.99 4.06 1.00 6.43 2.25 6.09 4.66 52 IG17_AR1 ActiveIntergenicRegion 0 2.20 9.88 2.84 6.69 10.67 12.72 18.37 3.13 5.43 6.82 1.68 3.00 12.01 3.35 1.42 2.06 7.44 1.92 0.00 4.80 1.53 11.57 4.08 53 IG17_SR1 SilentIntergenicRegion 0 5.19 8.68 1.16 10.76 18.48 17.76 31.29 6.74 8.38 8.15 2.48 3.20 8.52 4.37 3.47 5.87 7.22 4.91 1.02 11.33 4.59 8.09 9.27 54 IG17_AR2 ActiveIntergenicRegion 0 13.52 17.64 5.94 21.26 29.94 25.80 56.80 13.15 11.08 19.89 3.06 7.62 11.09 4.80 6.72 6.50 5.60 12.01 2.24 8.55 5.01 13.01 8.99