Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CAMKK2 Gene 0 105.32 165.43 133.37 93.05 78.95 177.99 105.98 85.10 38.62 73.26 87.00 38.41 32.76 82.29 67.44 68.34 88.35 108.85 54.20 126.78 79.29 69.52 55.76 2 392473 Transcript 0 15.43 16.87 20.21 12.92 13.62 30.03 19.94 17.10 12.29 12.96 14.57 5.19 9.60 9.42 11.83 12.61 17.87 31.59 11.71 32.19 21.80 17.47 10.39 3 347034 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 324774 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 337174 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 392474 Transcript 0 1.25 10.89 0.72 0.00 7.40 22.33 5.22 0.00 0.58 0.00 14.10 0.00 0.00 13.85 4.95 9.79 1.94 5.33 8.06 12.64 1.30 8.70 6.91 7 446440 Transcript 0 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.13 2.29 5.33 0.00 8 402834 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 404169 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 360452 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 412367 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 ER1a ExonRegion 0 1.54 2.02 1.45 0.81 1.42 2.73 5.18 1.02 1.34 1.71 0.51 3.81 4.76 3.49 7.91 3.94 5.55 4.77 5.98 5.56 0.58 2.58 3.85 13 E1a_E3a KnownJunction 0 0.00 0.00 1.15 0.00 0.00 2.38 0.00 0.00 0.00 1.16 0.00 0.00 0.00 0.00 0.00 8.12 4.68 6.14 8.66 5.62 0.00 2.94 3.59 14 E2_Aa NovelBoundary 0 0.00 9.60 1.66 2.06 16.13 34.58 25.79 5.79 3.36 11.60 21.48 0.00 0.00 28.02 15.70 38.02 17.67 22.51 32.47 25.95 42.56 8.88 37.99 15 E2_Ab NovelBoundary 0 10.52 25.59 13.04 4.13 17.23 63.66 18.50 30.39 8.39 13.38 23.80 0.00 5.68 19.13 14.09 40.50 13.28 42.78 22.12 36.82 8.65 23.70 14.68 16 ER2a ExonRegion 0 1.25 10.89 0.72 0.00 7.40 22.33 5.22 0.00 0.58 0.00 14.10 0.00 0.00 13.85 4.95 9.79 1.94 5.33 8.06 12.64 1.30 8.70 6.91 17 ER2b ExonRegion 1 3.17 25.46 2.83 0.09 13.60 64.34 18.23 3.06 3.22 1.03 25.81 0.00 0.49 26.05 15.41 18.51 14.24 17.17 14.07 19.19 6.79 20.23 17.01 18 E2a_E3a KnownJunction 0 3.78 14.34 5.88 3.30 3.74 16.75 3.89 9.41 5.06 5.51 13.74 0.00 0.00 6.83 4.45 0.00 8.23 37.10 0.00 14.06 10.87 7.90 10.84 19 ER3a ExonRegion 1 16.72 10.85 19.20 9.29 17.44 35.48 10.70 18.90 8.87 22.14 33.28 0.00 12.04 17.11 12.04 16.05 45.11 47.70 10.35 45.67 44.40 13.09 18.16 20 E3_Ab KnownBoundary 0 46.53 26.84 34.12 22.27 33.53 31.23 19.08 33.97 16.84 43.30 52.49 0.00 12.66 22.84 31.52 24.35 54.60 82.24 22.59 57.14 71.48 28.41 14.94 21 ER3b ExonRegion 1 11.33 27.43 50.03 24.92 12.31 57.32 25.36 42.49 21.37 45.33 75.98 8.84 14.96 75.69 38.72 40.25 81.34 112.11 30.02 111.21 91.01 41.84 42.44 22 E3a_E4a KnownJunction 1 23.63 36.11 78.50 50.11 38.20 70.93 58.21 69.42 33.85 87.11 146.98 44.26 6.33 101.12 42.28 80.32 145.68 135.10 41.22 198.65 180.51 69.50 67.18 23 ER4a ExonRegion 1 22.40 50.80 77.22 41.71 45.93 119.27 59.83 80.16 35.79 89.53 163.09 31.30 10.26 117.00 50.29 77.09 133.89 147.74 55.28 170.61 147.14 64.50 67.48 24 E4a_E5a KnownJunction 0 21.19 71.57 73.03 38.82 50.85 240.43 90.80 68.80 37.93 72.26 112.82 18.91 28.08 112.84 80.35 68.96 138.10 136.92 73.41 176.41 143.82 56.82 73.16 25 ER5a ExonRegion 1 18.15 60.56 76.49 48.38 45.74 196.08 76.50 70.45 42.70 91.92 127.00 21.09 16.15 121.00 49.21 74.14 104.71 176.05 59.52 206.22 144.91 70.22 59.82 26 E5a_E6a KnownJunction 1 18.00 87.35 82.85 66.39 69.61 176.43 121.40 73.48 36.60 89.85 157.46 51.17 26.95 153.51 45.99 104.67 97.24 185.79 95.44 245.89 158.03 66.44 66.33 27 ER6a ExonRegion 1 20.11 72.47 92.04 54.36 40.91 149.49 93.64 80.07 44.99 104.04 148.31 25.14 56.55 137.71 58.19 120.83 117.18 234.42 83.06 228.52 151.04 73.60 76.64 28 E6a_E7a KnownJunction 1 28.00 94.33 92.25 36.23 41.43 167.06 107.23 85.80 55.29 97.19 134.35 17.56 101.13 141.86 95.80 162.27 116.32 216.30 79.06 260.08 155.31 84.01 74.95 29 ER7a ExonRegion 0 18.97 55.68 89.73 56.39 31.97 128.35 62.83 60.26 54.19 89.55 122.15 24.94 31.64 137.10 72.06 104.85 115.09 174.23 89.24 191.17 163.35 89.98 78.30 30 E7a_E8a KnownJunction 1 35.71 35.78 82.43 52.57 27.84 132.99 94.42 60.17 37.04 87.11 139.40 44.11 54.05 151.86 44.38 61.86 124.08 159.06 83.20 223.01 187.49 77.22 50.19 31 ER8a ExonRegion 1 30.95 66.12 93.62 54.48 46.43 129.06 73.61 77.83 61.09 107.75 136.77 23.75 28.52 152.18 47.28 93.58 122.49 226.22 76.88 232.60 168.67 68.08 55.40 32 E8a_E9a KnownJunction 1 24.52 77.29 56.98 34.43 45.76 129.81 66.99 59.39 52.75 69.65 111.24 11.85 5.84 142.39 31.28 89.55 93.22 154.33 56.57 215.66 127.82 57.13 41.49 33 E9a_E10a KnownJunction 0 31.26 116.43 79.95 63.23 48.47 214.08 70.09 67.90 47.89 76.18 176.41 37.81 40.91 141.56 112.24 151.84 132.30 171.29 102.40 185.30 149.44 100.67 89.12 34 ER9a ExonRegion 1 27.23 106.12 98.25 65.17 53.39 188.46 76.01 93.42 69.22 109.79 176.33 32.08 24.52 170.90 75.70 153.33 145.24 243.74 93.10 235.40 164.78 95.46 85.70 35 ER10a ExonRegion 0 27.90 79.68 98.79 84.02 68.43 232.50 105.04 89.49 64.59 114.30 164.97 45.53 43.53 166.99 94.11 98.45 161.97 182.66 112.20 230.22 190.51 104.48 90.38 36 E10a_E11a KnownJunction 1 73.12 113.14 111.68 87.80 119.10 304.14 153.02 84.90 54.63 102.91 197.52 80.13 18.67 175.06 89.13 110.23 199.16 168.26 148.90 237.58 219.56 122.34 77.60 37 E11_Aa NovelBoundary 0 3.70 13.02 7.24 11.25 7.64 8.29 23.63 4.68 15.62 5.18 11.85 0.00 0.00 17.07 18.79 15.98 18.42 24.17 0.00 21.92 8.83 9.12 12.38 38 ER11a ExonRegion 0 32.70 96.61 109.65 89.31 51.37 189.13 90.88 95.25 60.39 109.61 154.83 74.68 45.87 159.16 85.04 112.48 187.89 210.67 85.32 223.53 171.90 111.07 96.73 39 E11a_E12a KnownJunction 1 19.19 116.23 124.36 84.14 83.96 196.19 126.39 102.52 59.95 115.02 156.51 88.68 68.18 183.35 67.00 133.30 249.18 172.74 108.71 296.00 157.84 122.59 57.19 40 ER12a ExonRegion 0 34.06 97.80 121.31 93.03 43.41 175.09 88.17 101.50 68.78 114.10 190.03 80.01 50.63 172.70 80.21 137.49 202.64 223.44 98.98 230.42 172.46 110.58 69.23 41 E12a_E13a KnownJunction 0 53.86 113.80 110.73 88.90 43.80 178.08 77.86 90.69 62.21 105.76 119.29 69.32 58.92 161.81 102.97 123.73 163.07 214.52 86.87 201.72 148.39 110.71 84.94 42 ER13a ExonRegion 0 33.81 91.95 143.68 99.80 81.75 200.73 105.09 122.53 60.92 123.71 147.24 91.50 58.05 165.31 82.69 138.97 195.69 277.19 68.44 199.83 144.70 110.51 114.81 43 E13a_E14a KnownJunction 1 65.57 110.57 178.23 103.02 77.76 234.13 152.80 145.03 75.06 132.05 209.68 76.98 73.37 144.62 87.52 96.13 292.75 288.52 73.60 214.12 150.86 94.18 96.63 44 ER14a ExonRegion 0 46.64 126.91 138.24 95.56 52.88 223.10 102.14 102.80 59.89 120.78 166.23 73.90 53.88 181.85 92.35 125.23 195.65 241.53 81.37 247.07 156.44 101.78 101.38 45 E14_Da NovelBoundary 1 24.37 15.39 11.50 9.19 0.00 8.06 8.35 9.32 6.19 15.77 0.00 24.31 6.17 4.83 4.45 20.34 16.36 49.91 3.76 38.67 14.21 13.90 4.18 46 E14a_E15a KnownJunction 0 32.01 121.56 97.66 110.24 59.68 201.30 83.03 94.22 38.89 121.36 82.97 23.56 46.10 91.65 68.48 40.25 87.14 211.20 52.05 227.80 146.60 73.11 58.56 47 E14a_E16a KnownJunction 0 13.56 0.00 4.88 7.19 7.56 0.00 0.00 4.93 4.20 2.63 31.80 29.41 13.64 54.68 32.63 76.30 74.99 9.74 4.80 6.33 24.96 24.13 49.08 48 I14 Intron 0 9.03 8.08 13.46 11.03 5.71 9.07 12.45 9.87 6.69 10.52 8.53 10.06 13.09 11.80 10.85 14.70 16.32 32.68 11.12 21.87 9.08 6.77 7.83 49 I14_SR1 SilentIntronRegion 0 9.14 8.15 13.61 11.16 5.78 9.16 12.61 9.98 6.77 10.65 8.62 10.19 13.26 11.93 10.97 14.88 16.50 33.08 11.26 22.12 9.15 6.85 7.93 50 ER15a ExonRegion 0 31.62 80.74 107.46 85.10 46.52 160.21 65.86 86.54 38.02 103.27 113.85 30.88 37.81 94.27 60.63 53.89 89.05 222.63 56.69 209.63 120.54 62.42 81.06 51 E15_Da NovelBoundary 0 6.96 20.72 13.84 12.65 7.13 27.14 20.23 20.45 14.90 17.25 2.68 11.55 20.78 16.89 4.45 22.81 0.00 22.76 0.00 25.25 17.17 6.25 14.60 52 E15a_E16a KnownJunction 0 59.12 109.32 121.05 87.57 64.18 173.93 74.28 69.83 40.31 126.22 99.34 29.86 46.26 79.40 37.21 94.42 82.75 198.06 86.21 165.23 122.01 95.34 91.68 53 I15 Intron 0 7.72 11.23 14.88 15.34 7.25 19.05 14.88 12.36 10.05 12.72 9.28 3.12 5.49 14.32 9.48 12.62 14.01 25.60 13.25 21.20 9.73 8.80 7.83 54 I15_AR1 ActiveIntronRegion 0 4.90 11.06 12.52 9.78 9.61 17.20 17.54 9.40 8.41 9.99 8.36 1.17 5.02 13.16 8.48 14.83 6.78 22.78 7.74 21.81 11.22 5.38 7.83 55 I15_SR1 SilentIntronRegion 0 8.15 11.27 15.25 16.18 6.90 19.34 14.50 12.82 10.30 13.14 9.42 3.42 5.57 14.51 9.63 12.30 15.10 26.05 14.08 21.12 9.52 9.32 7.84 56 E16_Aa NovelBoundary 0 10.67 22.43 29.09 27.57 0.00 56.39 19.43 18.52 14.90 7.58 5.37 0.00 0.00 4.94 20.52 15.64 25.62 29.02 26.35 25.63 14.02 5.63 8.71 57 ER16a ExonRegion 0 37.80 91.71 116.60 74.88 52.59 180.49 88.74 77.18 50.03 98.41 129.81 35.24 29.49 139.56 73.82 98.20 140.73 165.36 59.51 194.73 165.82 89.61 98.04 58 E16_Da NovelBoundary 0 6.15 23.88 16.35 10.59 0.00 9.82 20.76 17.46 10.39 6.02 14.06 0.00 6.49 19.60 14.09 12.22 30.48 34.53 18.35 47.55 3.15 7.96 8.28 59 E16a_E17a KnownJunction 0 3.19 3.16 12.95 8.69 0.00 10.28 6.01 7.68 11.02 9.19 7.26 0.00 0.00 0.00 0.00 0.00 4.58 49.04 4.05 50.11 123.55 30.19 27.23 60 E16a_E19a KnownJunction 0 26.75 89.72 63.36 58.00 31.92 162.86 63.64 53.68 37.59 71.75 95.76 18.76 26.30 131.09 55.63 66.99 97.43 63.96 49.70 122.72 31.38 22.04 40.46 61 I16 Intron 0 6.18 10.89 17.24 10.48 3.91 18.20 11.60 12.03 10.57 9.48 14.30 3.07 4.22 14.33 12.36 13.60 18.31 33.78 13.64 29.82 7.50 3.85 8.57 62 I16_SR1 SilentIntronRegion 0 6.20 10.92 17.30 10.51 3.92 18.27 11.64 12.08 10.61 9.52 14.35 3.09 4.22 14.38 12.40 13.64 18.38 33.91 13.69 29.93 7.53 3.87 8.61 63 ER17a ExonRegion 0 9.35 2.41 6.33 3.84 5.35 12.79 6.37 2.21 7.96 7.76 7.55 0.00 0.33 0.38 0.00 0.00 1.92 31.37 3.04 43.25 112.75 29.07 15.50 64 E17a_E18a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 8.01 2.25 0.00 1.79 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.89 8.33 0.00 65 E17a_E19a KnownJunction 0 3.63 3.09 3.43 2.06 0.00 12.55 6.09 0.00 1.39 1.64 2.05 0.00 0.00 0.00 0.00 0.00 0.00 19.73 0.00 29.91 54.24 14.27 3.84 66 E17a_E19b KnownJunction 0 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.13 2.29 5.33 0.00 67 I17 Intron 0 15.11 9.36 12.19 7.95 8.32 19.63 14.33 12.45 8.48 11.22 8.23 2.81 2.67 14.31 7.43 12.31 12.54 40.60 11.00 44.09 15.97 8.16 4.73 68 I17_SR1 SilentIntronRegion 0 15.17 9.40 12.25 7.99 8.34 19.72 14.39 12.51 8.51 11.27 8.27 2.83 2.68 14.37 7.46 12.37 12.60 40.78 11.04 44.29 16.05 8.19 4.75 69 E18_Aa NovelBoundary 1 68.83 32.56 32.26 31.53 19.19 27.37 41.65 33.15 21.41 31.40 7.21 0.00 26.13 40.44 4.45 35.97 26.46 68.07 22.78 102.65 2.90 24.37 15.79 70 ER18a ExonRegion 0 30.86 33.74 40.42 25.85 27.25 52.04 37.64 34.20 22.79 25.93 26.67 10.38 19.19 18.84 23.67 25.22 35.74 63.18 23.42 64.38 28.72 26.62 20.77 71 E18_Da NovelBoundary 0 10.37 18.55 32.32 48.08 21.22 36.63 22.30 24.89 10.45 15.85 17.00 0.00 21.26 2.24 6.30 15.98 26.27 27.94 29.37 58.48 5.50 16.17 4.35 72 I18 Intron 0 5.36 15.14 16.65 11.01 9.49 18.20 14.01 14.09 7.83 9.35 7.34 3.07 4.26 6.74 5.26 10.24 13.54 32.24 10.16 30.82 9.26 4.64 6.25 73 I18_SR1 SilentIntronRegion 0 5.01 7.03 14.78 8.41 9.43 14.79 10.47 10.33 6.76 8.82 6.70 3.89 5.22 6.10 3.60 10.30 9.69 26.06 10.35 19.47 7.29 4.90 7.71 74 I18_AR1 ActiveIntronRegion 0 5.73 23.31 18.55 13.64 9.56 21.67 17.60 17.89 8.93 9.89 8.00 2.25 3.31 7.40 6.94 10.20 17.43 38.50 10.00 42.28 11.26 4.40 4.79 75 E19_Aa NovelBoundary 0 29.63 31.70 22.00 10.95 30.73 36.51 48.14 10.39 17.01 30.81 15.00 0.00 6.82 2.47 28.18 4.36 21.51 37.85 4.80 36.75 9.27 0.00 12.21 76 ER19a ExonRegion 0 11.32 30.16 24.82 16.17 10.52 55.63 28.11 16.85 11.57 23.61 24.43 7.26 6.32 35.55 14.45 28.10 23.41 41.24 16.37 35.48 31.51 18.85 20.46 77 E19_Ab KnownBoundary 0 6.67 38.87 4.61 8.32 20.20 31.12 27.95 11.91 2.84 4.97 13.79 0.00 0.00 0.00 0.00 0.00 3.46 11.69 8.94 8.05 5.31 5.76 8.54 78 E19_Da KnownBoundary 0 9.78 2.89 6.56 3.56 8.49 10.90 8.61 4.44 5.21 4.46 0.00 0.00 0.00 0.00 0.00 8.29 0.00 2.49 0.00 0.00 2.90 0.00 0.00 79 ER19b ExonRegion 0 7.94 16.27 0.61 0.00 10.70 37.59 26.48 0.00 0.00 1.15 1.93 0.00 8.21 1.62 0.00 0.00 0.00 0.00 0.00 6.38 4.41 6.25 0.00 80 ER19c ExonRegion 0 8.04 5.40 3.55 2.24 3.90 3.30 6.51 0.00 0.00 1.10 2.82 0.00 2.41 1.16 0.00 0.00 0.00 4.09 0.00 1.70 1.20 1.34 0.00 81 E19_Db KnownBoundary 0 27.34 21.44 51.12 36.69 11.80 40.60 15.81 8.50 9.72 17.35 16.53 5.25 6.17 2.47 0.00 4.27 3.93 15.50 0.00 0.00 5.62 0.00 8.37 82 ER19d ExonRegion 0 213.37 321.03 236.27 166.52 147.04 299.67 186.99 139.75 55.09 106.05 115.55 61.39 49.18 104.70 106.28 95.77 113.09 123.51 76.83 160.97 87.66 103.42 75.27