Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MVK Gene 0 9.26 13.60 52.72 25.17 20.52 29.35 36.17 63.91 42.86 55.81 292.18 8.21 26.67 138.47 272.33 247.54 192.94 180.50 49.03 46.46 66.86 21.87 21.23 2 392727 Transcript 0 0.00 6.71 16.29 3.80 38.03 17.89 58.96 10.97 20.25 21.38 104.29 0.00 0.00 15.01 64.53 87.84 114.91 107.65 51.58 21.22 14.64 9.00 0.00 3 447878 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 0.00 0.00 0.00 0.00 4 228510 Transcript 0 0.00 1.36 5.31 2.73 8.03 6.11 12.80 6.34 7.00 6.88 34.15 0.00 1.56 6.50 33.85 34.67 34.11 24.64 13.80 4.96 8.81 2.08 0.00 5 ER1a ExonRegion 0 3.62 5.01 2.09 0.88 7.10 14.97 19.60 1.78 3.73 4.58 43.28 0.00 4.40 12.69 52.35 35.22 38.28 10.66 17.90 6.42 10.78 2.35 2.51 6 E1a_E2b KnownJunction 0 0.00 6.71 16.29 3.80 38.03 17.89 58.96 10.97 20.25 21.38 104.29 0.00 0.00 15.01 64.53 87.84 114.91 107.65 51.58 21.22 14.64 9.00 0.00 7 E1a_E2c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 0.00 0.00 0.00 0.00 8 E2_Ac NovelBoundary 0 0.00 5.66 12.27 5.59 20.97 13.91 14.22 19.92 15.22 14.40 46.54 6.30 19.15 8.95 42.03 63.74 40.86 51.69 26.92 15.21 22.73 4.71 0.00 9 ER2a ExonRegion 0 0.00 1.36 5.31 2.73 8.03 6.11 12.80 6.34 7.00 6.88 34.15 0.00 1.56 6.50 33.85 34.67 34.11 24.64 13.80 4.96 8.81 2.08 0.00 10 ER2b ExonRegion 0 0.00 4.07 13.75 6.36 27.05 16.50 40.60 22.85 22.92 25.87 115.11 2.41 10.42 22.74 89.94 119.55 111.50 94.85 46.72 21.51 33.06 6.71 1.63 11 ER2c ExonRegion 1 1.81 3.74 22.52 13.91 12.82 18.34 20.60 36.17 29.57 31.69 124.55 7.34 22.48 32.84 74.37 75.79 109.98 89.19 41.95 22.99 36.90 6.50 6.12 12 E2a_E3a KnownJunction 1 6.00 0.00 36.10 16.75 0.00 13.97 10.86 30.15 36.14 31.97 265.70 12.60 19.48 52.74 114.10 37.77 208.23 53.18 63.91 36.18 61.84 10.78 7.43 13 ER3a ExonRegion 0 2.06 9.47 45.02 21.70 12.69 15.88 17.11 54.73 47.64 47.05 379.74 13.95 46.11 131.65 239.84 246.41 231.09 184.34 85.14 63.57 75.82 21.86 22.68 14 E3a_E4a KnownJunction 0 3.04 17.89 52.04 24.87 35.48 39.98 40.19 41.61 40.22 50.18 339.82 17.41 20.62 146.74 116.69 254.72 216.46 200.72 59.48 28.76 63.01 5.02 25.95 15 E3a_E6a NovelJunction 0 0.00 5.92 4.91 3.53 7.72 0.00 6.45 11.58 3.59 5.45 2.68 0.00 6.82 4.59 4.45 7.78 15.99 17.37 0.00 8.56 9.02 3.00 0.00 16 E4_Aa NovelBoundary 0 7.04 3.22 0.00 8.89 0.00 0.00 8.83 2.55 1.27 0.99 9.48 0.00 8.28 2.24 13.35 4.36 12.16 3.65 4.71 23.14 2.35 3.12 0.00 17 ER4a ExonRegion 0 8.31 10.95 40.18 17.58 21.81 41.77 50.71 48.71 45.01 40.05 295.56 15.85 29.05 152.31 258.31 176.48 219.20 139.01 45.89 50.39 64.38 19.50 16.12 18 E4a_E5a KnownJunction 0 13.48 20.39 48.96 13.15 23.17 28.00 13.78 38.98 45.02 35.73 185.89 0.00 13.47 148.69 265.28 187.22 187.00 126.93 33.32 42.82 42.63 28.23 11.27 19 E4a_E6a NovelJunction 0 3.41 0.00 1.48 5.76 3.65 0.00 6.23 5.71 0.00 5.64 29.27 0.00 0.00 7.30 15.82 28.45 31.51 17.41 0.00 3.26 0.00 2.51 0.00 20 ER5a ExonRegion 0 7.64 12.10 33.45 19.85 14.36 20.70 31.04 43.71 40.14 46.26 297.27 2.39 17.50 154.59 221.24 228.17 207.66 168.78 41.41 47.42 68.17 20.47 15.96 21 E5a_E6a KnownJunction 1 7.41 29.86 43.35 26.10 19.52 58.32 52.33 84.45 47.25 66.51 407.84 12.60 73.37 168.64 350.33 309.49 318.28 218.96 54.40 52.35 77.35 34.84 32.61 22 ER6a ExonRegion 0 10.99 19.87 75.98 37.98 34.66 36.39 61.90 91.92 59.45 76.35 462.71 12.36 55.74 202.45 359.98 450.31 325.04 298.71 88.42 71.48 100.08 38.06 38.09 23 E6a_E7a KnownJunction 0 11.04 36.05 94.29 56.47 21.22 29.70 53.83 97.67 71.85 95.84 568.57 0.00 50.32 217.26 311.89 356.15 330.90 220.78 80.85 67.56 146.84 33.25 30.22 24 ER7a ExonRegion 0 5.11 29.40 72.88 42.19 28.91 30.66 46.31 86.12 60.65 93.05 517.43 5.46 55.06 196.80 333.27 331.39 344.58 237.36 50.07 54.44 123.60 26.59 32.56 25 E7_Da NovelBoundary 0 3.78 9.67 3.67 5.06 3.57 8.69 16.65 14.87 6.74 11.93 43.22 6.15 0.00 26.96 31.52 24.61 49.09 28.52 3.86 8.18 10.44 5.76 7.09 26 E7a_E8a KnownJunction 0 10.37 22.76 52.01 34.13 26.99 59.28 62.49 79.48 44.50 77.50 450.06 6.45 40.09 197.78 366.77 345.46 374.85 207.39 42.45 71.40 118.49 35.64 32.78 27 I7_AR1 ActiveIntronRegion 0 2.03 2.82 1.35 8.60 7.91 9.28 14.34 9.51 12.50 14.87 37.88 2.96 15.75 19.56 26.37 41.10 35.84 30.13 10.87 14.69 12.15 4.93 6.99 28 I7_AR2 ActiveIntronRegion 0 5.55 6.98 6.97 11.82 9.80 12.44 15.11 21.15 13.20 15.35 43.66 4.30 16.48 22.12 34.01 42.05 31.17 35.08 10.56 16.32 13.08 3.86 4.64 29 E8_Aa NovelBoundary 0 7.04 6.38 7.07 16.25 19.52 12.21 12.90 28.88 22.57 14.94 41.59 11.85 13.64 24.49 43.64 56.05 17.86 41.83 14.12 8.82 17.17 5.20 4.35 30 ER8a ExonRegion 0 14.96 18.21 67.06 36.77 34.40 46.57 54.76 97.46 47.15 80.27 448.03 15.61 40.05 219.04 372.54 411.39 315.11 267.19 65.70 55.81 125.78 38.58 33.50 31 E8a_E9a KnownJunction 0 41.12 41.18 95.53 39.02 62.48 29.07 69.16 102.89 50.93 98.69 495.39 12.60 69.96 225.15 546.76 565.49 312.01 293.20 99.20 65.96 149.01 48.62 35.94 32 E8a_E10a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER9a ExonRegion 0 17.09 19.21 77.43 32.60 43.45 37.74 56.93 86.64 51.41 91.42 392.00 8.95 37.96 178.85 349.39 354.42 234.17 280.97 58.97 58.83 94.27 28.97 26.40 34 E9a_E10a KnownJunction 1 20.08 23.61 72.68 48.08 44.57 54.23 105.73 116.94 62.96 90.93 470.70 6.00 12.99 249.52 411.03 461.93 286.02 383.86 90.64 70.24 112.87 21.92 40.63 35 E10_Aa NovelBoundary 0 21.19 0.00 1.83 1.50 3.57 7.67 14.88 11.42 10.71 5.94 22.85 0.00 6.82 11.95 10.01 11.88 3.65 12.27 0.00 14.38 2.53 5.88 0.00 36 ER10a ExonRegion 0 13.99 18.55 74.85 32.98 17.55 39.03 42.02 84.09 55.28 81.02 334.74 12.14 29.66 173.63 312.04 330.56 196.36 257.86 53.16 58.03 94.14 23.47 22.94 37 E10a_E11a KnownJunction 0 17.63 9.21 84.09 29.50 19.44 53.72 61.30 84.86 42.59 61.08 352.72 0.00 26.30 111.31 269.86 176.79 207.11 146.29 34.82 45.19 69.93 14.76 19.04 38 ER11a ExonRegion 0 10.54 14.23 61.32 28.49 20.12 29.91 33.44 73.55 45.33 59.02 276.36 6.93 21.32 141.70 317.02 251.09 177.81 181.06 43.38 45.60 58.70 23.17 23.59 39 ER11b ExonRegion 0 0.00 0.00 0.82 0.00 0.89 0.00 0.88 5.19 0.00 0.76 10.95 0.00 0.00 2.71 3.87 0.99 3.30 1.85 0.00 0.00 0.00 0.00 0.00 40 IG22_SR1 SilentIntergenicRegion 0 0.00 0.00 3.79 2.41 3.02 3.31 4.08 5.69 1.72 4.55 6.48 0.00 4.24 3.14 10.43 7.17 10.77 8.41 5.19 5.14 0.20 0.31 1.31 41 IG22_AR1 ActiveIntergenicRegion 0 0.00 0.00 3.42 0.00 2.23 1.83 0.55 5.69 3.71 2.29 4.27 0.00 9.18 3.38 13.90 2.97 0.00 5.54 0.00 5.85 1.74 0.00 0.00