Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CORO1C Gene 0 106.86 198.02 103.48 70.11 153.26 202.98 217.27 102.93 111.73 177.64 562.44 388.21 272.42 539.88 327.48 431.78 263.16 303.15 115.04 233.66 317.72 209.87 164.22 2 261401 Transcript 1 19.39 65.78 29.61 5.45 25.56 171.57 98.13 19.19 16.84 53.17 167.77 16.32 12.56 162.62 108.46 205.14 154.28 55.86 33.30 106.79 183.33 73.82 92.27 3 420959 Transcript 0 1.05 1.01 8.99 2.23 5.89 1.55 0.88 0.03 2.53 0.28 0.35 4.60 1.28 0.23 1.02 0.52 0.00 0.41 0.53 1.44 3.28 3.72 5.32 4 ER1a ExonRegion 1 35.96 107.09 26.96 4.91 47.99 289.70 165.83 18.01 19.16 74.08 285.33 8.33 5.31 252.26 192.69 275.95 264.43 61.18 57.65 159.95 304.02 124.44 119.40 5 E1a_E3a KnownJunction 0 2.82 24.47 32.26 5.99 3.14 53.44 30.43 20.37 14.53 32.26 50.22 24.31 19.80 72.99 24.23 134.32 44.13 50.53 8.94 53.63 62.64 23.21 65.13 6 ER2a ExonRegion 0 2.10 2.02 6.48 2.40 3.89 3.10 1.76 0.07 3.46 0.57 0.69 3.80 2.56 0.45 2.03 1.04 0.00 0.83 1.05 2.87 3.84 1.57 6.29 7 E2a_E3a KnownJunction 0 0.00 0.00 11.50 2.06 7.89 0.00 0.00 0.00 1.59 0.00 0.00 5.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.72 5.88 4.35 8 ER3a ExonRegion 1 18.43 23.71 90.82 48.44 37.65 83.50 50.28 75.05 101.59 183.52 735.55 120.27 80.11 483.32 274.46 532.19 319.11 459.55 119.36 343.30 476.34 149.32 235.21 9 E3a_E4a KnownJunction 0 49.79 45.39 104.93 54.80 258.23 447.58 219.40 86.75 138.63 214.47 656.64 338.51 213.95 698.22 307.81 500.81 398.97 591.62 51.77 346.69 470.43 149.47 192.58 10 ER4a ExonRegion 1 37.29 151.28 95.46 65.91 122.50 408.31 264.15 99.38 154.85 234.62 852.05 226.82 121.29 764.15 358.48 484.34 428.31 410.43 122.73 393.24 573.39 175.98 180.50 11 E4a_E5a KnownJunction 1 82.76 212.99 92.55 60.37 103.06 154.34 161.37 108.64 177.20 268.62 851.90 209.32 45.61 735.60 380.37 586.26 539.32 407.53 171.02 401.27 644.83 209.66 200.94 12 ER5a ExonRegion 1 68.36 111.91 100.02 72.95 59.11 158.81 129.35 130.75 174.88 261.52 916.21 319.15 192.58 985.99 485.11 582.95 536.34 491.93 128.91 375.48 699.36 267.27 213.86 13 E5a_E6a KnownJunction 0 93.50 109.45 97.42 78.25 72.41 201.25 204.43 136.57 191.78 285.06 889.23 389.08 269.79 997.24 454.79 587.11 523.05 521.03 139.96 464.29 635.38 222.03 200.69 14 E6_Aa NovelBoundary 0 110.98 0.00 5.85 1.27 26.91 0.00 10.82 10.72 2.84 5.61 7.48 27.31 12.82 2.47 23.73 21.28 0.00 3.81 4.80 11.38 5.50 3.12 0.00 15 ER6a ExonRegion 0 141.71 141.07 137.74 99.02 170.76 270.69 242.23 158.17 212.35 307.77 1229.11 479.48 399.25 1276.62 564.42 972.26 582.21 746.74 221.54 484.51 780.97 335.86 334.60 16 E6a_E7a KnownJunction 0 61.34 224.43 151.00 106.98 195.93 394.20 364.47 142.90 216.43 334.91 1404.83 575.59 477.89 1608.58 786.21 1020.07 603.46 770.20 397.47 531.47 842.15 433.41 362.45 17 I6 Intron 0 33.99 8.33 6.89 5.29 20.78 8.58 28.24 6.16 8.22 7.00 17.47 21.58 16.70 22.44 22.77 24.82 16.50 14.61 7.45 7.47 17.22 13.41 14.06 18 I6_SR1 SilentIntronRegion 0 32.53 8.56 7.02 5.45 21.87 9.40 30.77 6.60 8.53 7.72 18.15 23.28 17.30 23.52 22.98 25.56 15.90 14.85 7.97 7.79 16.66 14.11 14.68 19 I6_AR1 ActiveIntronRegion 0 45.35 6.97 6.26 4.35 13.76 3.14 11.35 3.31 6.31 2.20 13.25 10.26 13.01 15.56 22.02 20.38 21.19 13.42 4.10 5.45 21.70 8.93 10.07 20 E7_Aa NovelBoundary 0 74.31 18.94 7.33 6.86 32.26 31.12 49.64 7.76 7.64 9.40 33.11 37.81 13.15 22.13 46.85 44.69 13.74 12.44 0.00 18.66 30.70 24.13 15.79 21 ER7a ExonRegion 0 54.47 191.46 160.60 99.22 163.49 280.48 250.58 171.35 233.33 314.53 1145.18 652.23 527.16 1271.37 612.43 920.39 623.73 811.27 261.23 507.98 802.54 373.97 342.63 22 E7a_E8a KnownJunction 0 93.57 188.06 177.55 88.53 224.79 384.27 303.66 161.63 236.17 312.89 1390.62 869.68 512.30 1493.09 723.29 1074.59 669.84 854.44 272.10 536.01 933.64 340.15 378.24 23 I7 Intron 0 23.48 7.12 10.88 9.07 20.11 4.92 15.77 7.29 6.99 8.53 6.62 21.48 29.21 9.89 14.19 16.60 8.36 3.43 5.69 10.62 6.23 9.31 7.00 24 I7_AR1 ActiveIntronRegion 0 35.62 4.89 6.49 6.06 15.39 6.85 12.82 10.41 5.83 8.09 3.43 19.45 22.05 13.14 14.78 15.69 12.45 2.93 2.42 8.80 8.39 9.99 7.86 25 ER8a ExonRegion 0 124.15 188.02 189.26 114.37 229.91 333.42 328.04 183.74 220.89 325.24 1351.04 809.24 600.64 1418.66 698.15 1123.32 657.76 915.90 295.81 524.17 839.72 441.33 406.01 26 E8a_E9a KnownJunction 0 147.06 250.81 203.51 131.05 287.78 338.10 396.76 198.31 220.57 341.42 1225.42 751.29 595.25 1316.86 773.35 1001.45 631.79 871.81 250.17 566.05 740.77 416.39 318.40 27 I8 Intron 0 34.45 16.88 13.62 10.91 21.20 6.47 22.59 15.79 12.23 11.82 29.79 43.15 42.09 23.02 23.88 40.71 21.94 14.17 11.32 12.99 17.45 15.66 14.58 28 I8_SR1 SilentIntronRegion 0 35.60 13.57 7.90 9.65 18.04 6.27 17.11 11.69 8.88 7.39 24.96 41.37 45.18 23.88 17.07 37.96 22.47 13.17 10.18 8.92 15.81 10.79 11.04 29 I8_AR1 ActiveIntronRegion 0 34.45 15.19 16.69 13.53 20.80 7.45 25.31 15.70 15.39 15.01 37.34 52.81 46.34 21.77 31.51 37.85 22.48 9.85 9.21 15.93 15.54 21.21 11.66 30 I8_AR2 ActiveIntronRegion 0 1.75 24.05 13.64 2.37 6.51 0.16 36.55 7.29 25.24 6.53 7.06 15.44 15.29 6.28 7.95 6.98 3.30 0.32 8.59 4.81 4.60 10.42 9.32 31 I8_SR2 SilentIntronRegion 0 0.00 30.50 14.70 0.00 0.00 0.00 26.15 0.65 24.55 3.58 0.72 0.00 1.17 0.41 0.00 0.74 0.41 0.00 0.40 0.27 7.71 9.38 9.91 32 I8_AR3 ActiveIntronRegion 0 36.71 25.78 19.29 9.95 29.75 6.01 27.86 24.91 12.46 15.28 28.39 34.60 33.74 25.85 25.11 55.26 22.81 25.14 17.07 16.43 24.97 15.71 26.44 33 E9_Aa NovelBoundary 0 24.82 33.94 23.62 12.25 3.82 0.00 22.70 45.26 13.17 22.83 26.69 25.21 54.22 26.49 38.45 71.26 38.52 23.13 25.60 7.54 32.56 20.88 15.11 34 ER9a ExonRegion 0 174.54 279.99 167.33 101.70 249.12 382.02 380.28 171.96 207.00 330.98 1279.02 740.87 566.85 1163.68 611.15 899.43 567.91 750.06 248.15 455.55 714.73 370.45 322.63 35 E9_Da NovelBoundary 0 53.19 24.27 33.97 25.87 31.66 5.17 25.88 40.91 28.56 29.23 40.64 62.57 79.70 79.88 52.91 44.09 31.98 18.78 48.57 34.77 36.02 37.72 32.01 36 E9a_E10a KnownJunction 0 305.02 353.62 164.10 104.58 261.21 444.63 473.87 140.84 200.87 370.96 1320.91 802.46 539.09 1272.95 581.37 1016.74 616.83 756.61 173.56 480.98 710.93 346.28 280.59 37 I9 Intron 0 35.22 50.55 32.93 22.90 35.77 20.97 42.01 27.52 21.44 32.75 40.88 48.36 53.35 45.35 29.57 46.91 20.02 23.23 21.89 20.44 19.52 29.98 24.11 38 I9_AR1 ActiveIntronRegion 0 40.41 37.16 23.90 14.95 34.30 20.01 52.73 28.10 20.07 27.97 28.99 43.06 61.57 37.52 25.69 41.34 16.20 21.80 17.36 21.47 13.80 26.70 22.43 39 I9_AR2 ActiveIntronRegion 0 34.31 54.40 35.52 25.11 36.51 21.43 39.80 27.67 22.01 34.29 44.26 50.16 51.86 47.77 30.84 48.78 21.18 23.84 23.24 20.41 21.14 31.10 24.79 40 I9 Intron 0 39.36 42.40 33.07 28.43 41.65 27.11 52.62 31.77 30.46 40.65 51.65 90.35 95.14 50.28 37.99 54.99 29.40 25.19 17.46 26.03 34.29 64.45 27.31 41 I9_AR1 ActiveIntronRegion 0 40.22 43.39 33.89 28.98 42.60 27.78 53.75 32.46 31.13 41.64 52.83 92.47 97.34 51.40 38.84 56.39 30.03 25.74 17.90 26.63 35.08 65.93 27.97 42 E10_Aa NovelBoundary 0 39.04 53.21 19.99 30.00 54.67 51.39 77.68 31.79 35.13 37.88 52.07 57.47 92.36 29.78 13.35 41.78 24.59 22.30 19.11 15.72 20.08 29.94 22.88 43 ER10a ExonRegion 0 287.81 361.59 161.43 108.80 244.60 379.25 403.88 173.05 209.20 345.77 1361.83 645.46 517.36 1215.54 664.04 1052.13 562.52 763.98 199.91 423.95 697.66 369.93 327.13 44 E10_Da NovelBoundary 0 54.08 59.99 34.27 23.51 14.69 20.39 79.36 24.03 30.27 36.53 27.27 56.12 27.11 34.43 13.35 34.26 24.50 8.71 9.41 8.56 20.70 49.72 15.79 45 E10a_E11a KnownJunction 0 204.70 428.08 180.48 117.47 273.60 342.19 376.88 212.80 216.69 311.68 1152.24 764.95 668.79 1197.07 814.64 1128.68 519.77 692.77 249.14 412.59 569.46 405.43 334.96 46 I10 Intron 0 30.84 32.41 4.16 8.32 20.71 9.19 31.95 8.21 8.38 10.12 35.21 36.30 38.94 20.75 12.82 29.77 12.02 18.02 11.60 6.78 24.08 29.41 10.70 47 I10_SR1 SilentIntronRegion 0 31.67 33.19 4.25 8.53 21.28 9.40 32.81 8.44 8.56 10.37 36.10 37.26 39.93 21.32 13.18 30.57 12.36 18.44 11.89 6.97 24.75 30.22 10.99 48 E11_Aa NovelBoundary 0 37.71 51.83 39.21 27.20 23.85 8.01 31.05 20.00 19.88 25.33 33.27 47.72 73.53 27.02 34.49 64.94 8.42 30.88 13.18 8.31 30.21 22.47 42.34 49 ER11a ExonRegion 0 160.38 308.99 242.33 153.47 318.98 450.43 410.04 253.13 255.68 396.03 1243.28 894.25 739.98 1262.20 857.86 1207.30 594.71 858.20 313.47 544.12 737.49 516.95 420.61 50 E11a_E12a KnownJunction 0 148.84 313.96 216.08 129.99 361.55 457.58 631.84 223.94 253.99 379.51 1151.71 909.15 550.78 1018.49 714.76 636.50 739.22 481.52 152.95 587.78 744.60 278.92 263.00 51 ER12a ExonRegion 0 114.52 220.33 85.60 61.83 152.92 159.25 206.78 81.38 76.13 126.21 314.50 343.68 219.66 296.06 219.94 228.16 133.26 122.51 69.39 131.25 133.44 157.33 94.57 52 IG5 Intergenic 0 20.50 2.77 1.57 1.37 8.42 1.43 4.41 1.70 3.89 2.98 9.64 41.43 21.13 14.63 25.87 25.65 11.42 2.74 2.17 4.08 3.27 0.62 3.54 53 IG5_SR4 SilentIntergenicRegion 0 37.96 4.54 2.15 2.88 7.03 3.95 7.79 3.07 3.46 5.59 8.00 21.35 14.41 6.78 15.48 23.05 11.81 4.62 2.14 7.66 3.72 1.56 5.95 54 IG5_AR4 ActiveIntergenicRegion 0 21.76 3.37 2.86 1.61 10.21 3.74 4.48 2.12 1.75 2.75 2.97 18.30 16.05 6.30 12.39 17.77 7.55 5.34 1.73 5.31 3.45 1.06 4.73 55 IG5_SR3 SilentIntergenicRegion 0 29.37 3.66 1.98 1.82 8.62 1.42 6.23 2.24 3.91 3.90 13.65 60.00 37.42 22.03 36.53 35.08 16.68 2.71 3.17 5.63 3.40 0.48 5.08 56 IG5_AR3 ActiveIntergenicRegion 0 35.39 3.47 3.33 1.56 7.20 1.38 3.62 1.45 4.16 4.27 14.81 51.49 24.63 28.06 28.70 44.69 12.08 4.15 0.81 4.24 5.15 0.88 3.53 57 IG5_SR2 SilentIntergenicRegion 0 10.29 1.76 0.74 0.66 9.89 0.64 2.86 1.10 4.61 1.66 8.37 42.66 13.76 13.21 26.87 22.99 9.79 1.82 1.90 2.46 2.67 0.52 1.96