Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NUP37 Gene 0 88.12 104.66 70.29 56.40 103.56 48.20 101.09 40.62 24.43 80.79 201.26 220.49 100.14 277.00 252.21 194.93 215.65 38.68 45.37 51.24 61.92 70.66 37.10 2 251074 Transcript 0 123.81 137.67 79.69 67.31 123.78 55.69 122.86 44.20 28.45 88.17 217.00 256.71 101.95 336.16 301.82 212.84 237.92 42.03 52.99 60.28 69.66 78.22 39.66 3 ER1a ExonRegion 0 21.40 14.65 45.70 33.53 50.90 11.97 34.39 31.30 14.95 56.06 199.30 116.93 65.89 177.93 171.54 158.68 190.93 35.71 27.46 45.75 57.41 49.49 35.01 4 E1a_E2a KnownJunction 0 37.27 43.74 59.05 47.55 186.08 102.27 132.05 40.66 14.99 68.26 181.68 195.96 95.61 214.08 185.67 193.11 216.92 40.87 16.57 68.26 44.29 47.03 39.10 5 ER2a ExonRegion 0 63.83 115.15 53.84 40.66 172.53 114.53 199.09 44.26 24.82 79.70 249.30 262.71 69.11 248.98 195.92 161.78 262.99 29.49 44.01 50.30 62.18 57.41 26.92 6 E2a_E3a KnownJunction 0 172.33 224.10 68.86 57.67 90.07 60.70 102.02 42.84 22.57 74.03 223.95 341.21 105.67 338.34 262.44 154.32 242.26 38.63 40.47 47.43 55.11 55.66 20.23 7 I2_SR2 SilentIntronRegion 0 0.49 0.00 0.00 0.36 1.25 0.00 1.24 0.00 0.00 0.20 4.62 8.83 23.84 2.17 6.39 1.39 5.20 0.16 0.00 0.74 0.00 0.00 0.00 8 E3_Aa NovelBoundary 1 0.00 0.00 0.00 0.00 4.33 0.00 0.00 0.00 0.00 1.50 2.32 12.60 55.19 7.24 8.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER3a ExonRegion 0 183.15 143.02 62.16 60.23 103.95 51.45 106.28 55.90 30.78 88.61 273.31 329.69 131.51 420.82 276.69 230.24 302.28 49.38 68.25 59.25 54.79 89.16 39.26 10 E3a_E4a KnownJunction 0 317.17 134.98 71.23 80.44 162.99 70.93 195.38 73.85 47.48 110.62 283.39 320.50 140.58 507.45 333.40 266.85 291.35 46.47 73.70 76.57 75.68 102.75 46.18 11 I3 Intron 0 0.28 0.14 0.00 0.07 0.36 0.00 1.29 0.00 0.00 0.46 4.99 6.20 26.49 3.69 3.27 3.68 8.41 0.12 0.85 0.29 0.15 0.00 0.39 12 I3_SR1 SilentIntronRegion 0 0.28 0.14 0.00 0.07 0.36 0.00 1.29 0.00 0.00 0.46 5.00 6.21 26.54 3.70 3.28 3.69 8.43 0.12 0.85 0.29 0.15 0.00 0.39 13 ER4a ExonRegion 0 197.88 109.66 70.34 62.79 98.58 42.70 116.41 47.14 33.50 80.49 221.59 324.25 112.61 404.01 278.58 260.39 250.56 65.37 84.03 60.29 69.24 81.56 48.75 14 E4a_E5a KnownJunction 0 144.99 138.33 78.92 71.79 121.56 53.21 113.14 60.58 32.46 88.35 220.42 303.40 120.12 437.34 345.02 169.02 291.91 67.90 68.52 51.77 99.21 75.44 71.02 15 I4 Intron 0 1.26 1.01 0.80 2.10 1.80 0.32 4.36 1.02 0.61 1.14 6.17 15.25 36.44 4.66 5.07 3.59 9.86 0.54 0.80 1.13 0.54 0.24 0.55 16 I4_SR1 SilentIntronRegion 0 1.06 0.79 0.52 1.69 1.21 0.27 3.97 1.11 0.47 0.92 5.78 13.64 29.87 3.81 3.92 2.58 8.55 0.43 0.61 1.14 0.52 0.16 0.45 17 I4_AR1 ActiveIntronRegion 1 2.22 2.64 3.48 4.44 4.86 0.27 7.49 0.77 0.97 1.66 4.48 24.49 41.95 4.95 9.07 2.67 9.18 0.14 0.48 0.36 0.50 0.47 0.00 18 I4_SR2 SilentIntronRegion 1 1.85 1.34 0.82 3.07 3.38 0.64 4.75 0.68 1.21 2.09 9.38 19.05 70.63 9.31 9.28 9.87 17.76 1.45 2.09 1.49 0.67 0.55 1.41 19 E5_Aa NovelBoundary 1 0.00 0.00 0.00 1.66 4.33 0.00 2.25 0.00 0.00 2.71 4.69 18.31 80.51 7.42 0.00 3.42 17.67 0.00 3.95 3.13 0.00 0.00 0.00 20 ER5a ExonRegion 0 88.50 128.38 73.09 70.26 119.91 49.29 112.46 47.66 30.38 91.13 299.60 341.84 161.83 438.87 296.25 254.66 304.34 63.88 69.48 49.85 98.54 76.11 61.38 21 E5_Da NovelBoundary 1 0.00 0.00 0.00 1.37 0.00 0.00 8.97 1.93 1.74 1.53 16.95 47.87 77.11 7.18 12.61 7.69 21.51 6.14 9.60 2.75 0.00 0.00 0.00 22 E5a_E6a KnownJunction 0 90.39 265.61 93.37 69.69 128.61 52.47 157.88 38.73 28.10 74.25 215.84 290.34 150.80 394.14 308.05 310.60 309.30 50.03 90.07 61.36 78.58 95.46 47.04 23 I5 Intron 0 1.34 0.85 0.88 1.85 1.55 0.58 3.76 1.40 0.46 0.78 5.73 16.47 35.18 5.76 5.65 4.20 12.79 0.50 1.05 1.29 0.22 0.45 0.78 24 I5_SR1 SilentIntronRegion 0 1.32 0.95 1.08 2.18 1.75 0.54 4.02 1.28 0.49 0.61 6.29 16.78 35.44 5.86 5.87 4.49 13.37 0.57 1.09 1.43 0.27 0.49 0.92 25 I5_AR2 ActiveIntronRegion 1 3.68 0.00 0.00 0.00 1.31 0.00 4.06 1.55 0.00 3.40 3.90 18.31 54.55 7.12 2.44 2.55 17.03 0.00 0.00 0.78 0.00 0.51 0.00 26 I5_SR2 SilentIntronRegion 0 1.24 0.45 0.00 0.45 0.67 0.80 2.57 1.94 0.40 1.34 3.33 15.13 32.82 5.22 4.98 3.05 9.78 0.20 0.93 0.71 0.00 0.26 0.21 27 E6_Aa NovelBoundary 1 0.00 0.00 0.00 4.03 4.33 0.00 9.94 0.00 0.00 2.04 11.48 0.00 65.42 7.18 5.19 15.55 17.20 4.23 0.00 3.26 3.09 0.00 0.00 28 ER6a ExonRegion 0 102.07 164.73 97.50 77.75 152.00 77.98 150.00 52.35 28.51 107.37 244.71 324.00 130.52 373.53 351.05 312.15 305.75 57.06 70.83 61.94 80.00 95.78 62.22 29 E6_Da NovelBoundary 1 25.71 12.30 4.70 10.55 12.14 12.61 22.43 5.79 7.49 5.94 23.69 40.06 67.04 4.94 10.75 3.33 32.82 6.09 0.00 5.43 0.00 12.00 8.54 30 E6a_E7a KnownJunction 0 132.25 164.77 112.80 83.44 169.10 51.62 140.26 36.68 18.95 109.19 231.11 246.83 76.46 293.31 354.78 262.58 250.58 25.00 61.93 82.96 75.00 102.93 32.95 31 I6 Intron 1 5.69 11.38 4.72 9.18 8.64 5.92 18.38 7.48 3.37 6.44 8.53 28.41 51.86 7.52 7.31 8.31 28.41 3.37 3.43 3.89 3.08 5.83 3.79 32 I6_SR1 SilentIntronRegion 0 6.07 13.54 4.38 8.91 7.43 5.51 18.80 7.83 3.48 6.83 10.84 25.04 53.95 7.28 7.70 8.42 31.89 2.67 2.54 3.81 3.00 5.62 4.09 33 I6_AR1 ActiveIntronRegion 1 4.97 6.97 5.47 9.87 11.28 6.86 17.72 6.85 3.18 5.68 3.76 35.86 48.10 8.13 6.59 8.19 21.43 4.90 5.34 4.12 3.31 6.35 3.21 34 E7_Aa NovelBoundary 1 0.00 6.05 3.99 16.41 6.79 9.26 24.07 5.09 1.79 8.09 9.21 49.67 100.64 20.19 8.90 16.24 21.60 2.11 0.00 5.31 5.68 6.25 0.00 35 ER7a ExonRegion 0 124.87 131.19 93.85 88.85 120.93 38.98 110.30 34.06 33.06 107.58 174.15 255.27 68.24 345.08 401.80 218.60 191.26 37.64 54.90 73.51 74.54 77.95 36.79 36 E7_Da NovelBoundary 1 0.00 2.70 6.98 15.55 12.05 0.00 18.42 1.77 4.95 4.11 9.16 53.27 74.83 23.78 10.75 16.06 17.86 4.68 0.00 9.01 2.90 5.69 0.00 37 E7a_E8a KnownJunction 0 154.55 142.54 85.92 96.62 132.94 40.49 144.32 37.30 40.68 95.79 184.89 207.22 67.85 405.03 489.77 184.57 158.95 42.08 32.10 90.25 75.99 66.44 27.74 38 I7 Intron 0 9.27 8.57 5.80 7.34 9.81 2.01 12.10 4.37 1.71 5.14 5.50 19.75 38.72 7.90 7.62 5.20 12.64 2.51 2.79 3.26 3.01 3.53 1.12 39 I7_SR1 SilentIntronRegion 0 9.30 8.59 5.81 7.36 9.84 2.01 12.14 4.38 1.72 5.16 5.51 19.81 38.85 7.93 7.65 5.22 12.68 2.52 2.80 3.27 3.01 3.55 1.13 40 ER8a ExonRegion 0 151.89 204.94 129.93 85.85 129.15 50.96 126.48 45.79 30.35 117.01 243.87 194.83 70.35 317.79 382.01 244.85 249.22 38.84 45.75 78.52 84.07 95.55 41.14 41 E8_Da NovelBoundary 1 16.52 9.21 10.44 27.54 12.56 2.90 12.06 2.51 4.17 8.43 17.79 12.60 49.19 21.66 0.00 10.51 31.60 2.03 0.00 8.25 6.05 9.25 8.37 42 E8a_E9a KnownJunction 0 71.20 141.55 102.45 73.45 98.81 48.55 91.90 32.98 33.48 89.85 159.67 197.31 61.20 256.76 324.12 149.02 145.02 13.80 38.97 36.24 69.19 104.40 25.95 43 I8 Intron 0 13.94 11.05 5.73 4.67 12.86 4.79 16.47 4.04 0.96 4.64 12.12 23.42 45.06 11.32 16.60 5.28 12.41 0.96 2.33 5.34 1.15 6.10 2.76 44 I8_SR2 SilentIntronRegion 0 4.19 8.06 0.00 4.01 9.27 2.72 18.23 3.78 0.91 2.54 5.74 14.12 21.04 10.12 9.97 2.94 1.63 0.00 0.00 3.16 1.07 4.13 1.45 45 I8_AR2 ActiveIntronRegion 0 18.04 12.92 7.91 5.28 15.08 5.82 17.41 4.47 1.06 5.68 15.08 28.26 56.12 12.67 20.05 6.44 16.68 1.33 3.22 6.46 1.27 7.22 3.39 46 E9_Aa NovelBoundary 1 3.33 14.41 6.95 5.29 11.29 10.22 21.55 6.49 0.00 4.30 15.90 27.61 62.33 16.54 54.64 24.69 56.85 6.22 0.00 2.49 5.31 4.78 0.00 47 ER9a ExonRegion 1 51.11 73.06 55.77 43.72 66.18 28.62 56.29 29.35 18.65 60.54 82.27 111.77 104.76 141.29 173.79 86.78 81.05 12.42 13.76 30.43 30.35 56.55 12.47