Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC025423.2 Gene 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.33 0.31 0.00 0.64 1.04 0.00 0.00 0.55 0.00 0.74 0.28 0.00 0.79 0.00 0.00 2 500831 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.12 0.11 0.00 0.24 0.43 0.00 0.00 0.20 0.00 0.28 0.11 0.00 0.29 0.00 0.00 3 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.37 0.34 0.00 0.71 1.14 0.00 0.00 0.61 0.00 0.83 0.32 0.00 0.88 0.00 0.00 4 E1_Da NovelBoundary 0 65.79 89.85 59.40 127.79 185.31 95.85 395.43 109.71 134.66 174.17 383.31 2056.57 1369.39 738.66 376.79 850.12 648.25 171.33 26.82 196.48 532.03 240.40 370.31 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 14.56 4.30 9.08 39.76 21.23 8.53 49.58 22.08 17.72 17.18 26.18 229.06 237.24 38.38 39.11 47.49 40.86 6.34 3.71 18.69 12.59 43.65 25.17 7 Ix_AR1 ActiveIntronRegion 0 15.63 4.58 9.99 44.49 18.26 6.80 46.84 24.21 17.17 16.89 27.33 242.84 257.07 38.81 42.39 50.36 45.09 6.61 3.51 21.20 14.92 47.73 26.53 8 Ix_SR1 SilentIntronRegion 0 11.38 3.48 6.29 25.24 31.17 14.24 59.24 15.60 19.81 18.40 22.94 188.75 177.69 37.65 29.24 39.05 28.03 5.58 4.41 10.94 5.32 31.31 21.23 9 Ix_AR3 ActiveIntronRegion 0 8.51 5.61 7.43 7.64 12.14 4.07 18.90 6.92 12.50 4.08 23.57 66.86 55.69 30.74 32.31 70.53 65.08 6.79 7.49 10.00 71.32 7.89 29.67 10 Ix_SR3 SilentIntronRegion 0 9.42 3.05 8.27 15.06 24.75 1.38 21.38 11.49 13.22 3.73 23.97 154.35 253.03 29.80 31.62 75.49 81.37 0.00 10.03 4.47 57.19 15.42 33.77 11 Ix_AR1 ActiveIntronRegion 0 10.00 6.96 7.70 12.23 16.57 2.39 23.71 3.76 10.19 8.91 17.93 88.89 118.45 26.35 55.33 77.91 54.84 3.15 6.23 7.28 22.52 6.10 36.37 12 Ix Intron 0 11.52 20.10 8.67 22.67 18.56 10.39 54.22 17.43 15.82 10.29 27.98 244.71 252.93 32.82 65.48 106.23 82.44 13.46 8.14 23.06 71.90 15.14 43.10 13 Ix_AR1 ActiveIntronRegion 0 12.77 20.97 6.12 16.34 12.81 2.89 42.47 15.66 9.15 12.73 30.31 185.52 305.59 28.20 42.37 73.51 68.53 11.93 3.29 18.69 85.43 9.94 28.13 14 Ix_SR1 SilentIntronRegion 0 11.42 20.04 8.92 23.31 19.13 11.12 55.42 17.62 16.48 10.07 27.79 250.71 248.19 33.30 67.79 109.52 83.88 13.62 8.62 23.51 70.69 15.66 44.60 15 Ix Intron 0 8.31 6.95 5.99 14.22 11.06 5.70 34.14 3.96 4.78 5.14 15.58 173.81 280.25 29.66 57.79 57.26 58.29 4.62 3.16 12.94 28.89 11.03 26.48 16 Ix_SR3 SilentIntronRegion 0 8.99 8.53 5.96 14.41 12.33 6.55 37.09 4.93 4.38 4.87 15.81 177.36 250.58 29.41 61.14 50.02 51.27 3.77 3.13 13.11 24.97 11.22 22.81 17 Ix_AR2 ActiveIntronRegion 0 5.70 3.65 7.54 15.30 6.25 3.29 27.10 2.31 5.29 5.52 14.23 144.47 267.12 31.51 45.45 77.92 54.53 7.42 4.00 14.52 37.97 13.10 44.30 18 Ix_SR2 SilentIntronRegion 0 8.80 8.54 3.95 14.06 14.93 9.35 35.06 3.28 8.89 5.71 14.96 195.52 327.46 35.76 81.76 62.12 66.35 4.69 3.57 10.60 25.65 8.83 25.02 19 Ix_AR1 ActiveIntronRegion 0 8.59 4.63 6.30 21.59 11.81 5.37 33.13 2.64 9.90 10.65 20.31 212.19 316.12 32.48 56.72 68.29 129.65 9.71 1.68 11.37 35.06 10.66 23.29 20 Ix_SR1 SilentIntronRegion 0 8.89 1.22 2.18 1.31 9.60 2.20 24.89 0.00 0.10 1.12 13.28 182.65 609.92 20.58 48.57 59.41 75.65 0.00 1.91 8.94 40.26 3.90 14.30 21 Ix Intron 0 15.80 6.47 9.17 23.42 13.65 3.12 36.70 10.28 10.07 12.25 8.86 122.47 169.60 6.13 64.42 50.97 71.24 4.42 5.18 11.32 20.51 1.23 23.01 22 Ix_AR1 ActiveIntronRegion 0 11.45 6.93 9.88 22.37 13.46 3.13 34.58 10.93 9.92 12.19 7.34 114.84 164.28 4.29 66.39 46.27 68.71 3.93 4.87 11.55 20.89 1.22 18.34 23 Ix_SR1 SilentIntronRegion 0 24.92 6.11 8.58 27.01 14.85 3.33 43.28 9.86 11.06 13.28 12.27 145.31 191.54 9.92 65.66 63.15 81.02 5.64 6.14 11.77 21.36 1.34 33.27 24 E2_Aa NovelBoundary 0 13.48 40.98 34.86 42.19 128.95 163.20 320.36 51.59 56.08 74.11 180.78 256.28 492.82 195.72 80.60 219.09 357.27 81.25 51.39 99.07 407.17 94.18 143.58 25 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00