Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	SLC35E3	Gene	0	23.96	56.03	46.39	63.20	58.32	75.60	86.09	46.79	50.51	49.25	38.64	42.63	54.12	58.93	60.18	43.21	46.56	65.53	43.68	61.26	31.02	29.93	31.71
2	398004	Transcript	0	11.55	28.88	32.94	38.43	23.80	75.34	48.90	37.20	41.94	42.36	39.70	19.95	18.41	51.29	59.14	61.10	45.12	122.06	40.50	58.96	39.53	23.11	42.86
3	319429	Transcript	0	0.00	0.00	23.23	23.48	0.00	0.00	0.00	26.07	26.27	31.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	68.77	0.00	0.00	0.00	0.00	0.00
4	IG34_SR1	SilentIntergenicRegion	0	1.83	6.42	14.03	11.85	25.66	8.01	18.27	17.40	10.55	19.48	1.40	5.91	3.36	2.29	1.57	2.21	2.32	5.20	6.63	8.75	2.95	4.53	3.06
5	IG34_SR2	SilentIntergenicRegion	0	2.89	6.53	5.56	18.12	16.11	7.10	14.19	16.73	12.07	19.59	3.08	3.15	6.37	3.27	2.99	0.00	0.00	10.06	8.92	10.26	1.98	5.19	4.68
6	IG34_AR4	ActiveIntergenicRegion	0	3.46	5.51	9.71	13.71	16.15	10.22	11.99	18.58	10.73	18.71	3.26	2.49	1.33	1.65	2.91	1.23	2.03	6.62	2.28	7.62	1.24	3.83	2.55
7	ER1a	ExonRegion	0	21.70	34.82	11.50	15.35	35.84	197.33	104.89	15.94	13.70	10.91	14.33	2.41	2.80	27.40	32.03	40.62	27.84	101.18	20.59	33.72	30.03	12.16	34.08
8	E1_Ab	KnownBoundary	0	19.48	30.52	25.43	35.99	71.90	200.06	126.17	51.71	34.72	26.57	17.48	17.11	12.66	11.95	5.69	33.32	11.78	166.31	23.15	41.67	24.15	13.35	18.44
9	ER1b	ExonRegion	0	1.73	6.55	23.64	22.86	10.89	29.38	16.24	29.05	22.86	27.24	20.48	3.57	11.21	26.68	24.10	30.11	35.53	61.79	24.10	40.80	35.29	8.76	20.15
10	E1_Da	KnownBoundary	0	0.00	0.00	10.02	30.57	0.00	2.56	0.00	13.84	14.79	16.04	22.85	0.00	0.00	13.07	18.54	20.42	34.13	54.68	25.13	44.55	42.32	5.27	11.01
11	E1a_E1c	KnownJunction	0	0.00	0.00	17.06	33.50	0.00	0.00	0.00	26.49	16.96	33.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	70.76	0.00	0.00	0.00	0.00	0.00
12	E1_Ac	KnownBoundary	0	0.00	0.00	10.41	11.32	0.00	2.84	2.16	14.54	9.87	16.20	14.00	0.00	0.00	21.90	22.50	42.89	17.20	48.87	18.64	51.96	8.46	15.31	49.43
13	ER1c	ExonRegion	1	0.00	8.13	26.71	44.98	2.68	4.03	3.97	34.91	39.77	44.73	34.02	8.66	0.00	68.54	98.64	79.06	53.47	130.82	42.05	88.08	47.60	26.25	52.27
14	ER1d	ExonRegion	1	3.04	12.14	33.20	44.21	4.52	5.62	8.32	47.53	48.29	54.69	45.48	14.07	3.66	68.11	85.31	86.47	51.16	142.39	49.77	85.24	36.29	30.34	61.85
15	E1_Db	KnownBoundary	0	0.00	9.67	10.29	13.15	0.00	2.78	2.25	16.43	18.37	11.74	20.85	0.00	0.00	21.37	8.90	35.20	9.54	41.87	22.87	24.74	11.86	14.21	17.33
16	E1b_E1d	KnownJunction	0	0.00	0.00	30.28	19.18	0.00	0.00	0.00	32.69	33.25	31.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	78.02	0.00	0.00	0.00	0.00	0.00
17	E1_Ad	KnownBoundary	0	6.59	15.33	21.55	26.24	8.49	0.00	0.00	24.11	34.95	21.79	27.69	0.00	26.30	2.47	26.33	34.44	26.37	71.26	24.57	23.78	35.65	10.90	32.01
18	ER1e	ExonRegion	0	7.20	21.15	36.03	40.61	8.03	11.00	9.53	48.05	57.56	55.97	64.95	21.65	20.64	42.88	65.57	90.35	60.74	155.95	50.97	62.98	37.90	27.09	50.51
19	ER1f	ExonRegion	0	7.55	34.73	47.90	41.37	25.48	70.02	32.53	45.68	61.53	56.36	70.36	17.65	43.51	50.85	45.80	74.44	64.44	193.93	69.05	59.74	50.14	23.62	51.46
20	E1_Dc	KnownBoundary	0	3.11	22.50	32.61	22.54	11.63	92.11	23.19	14.70	21.41	26.35	20.01	5.25	0.00	14.48	14.71	40.50	28.42	112.55	28.24	26.21	38.86	11.82	38.50
21	E1c_E1e	KnownJunction	0	0.00	0.00	22.35	17.78	0.00	0.00	0.00	19.02	28.62	29.74	0.00	0.00	0.00	0.00	0.00	0.00	0.00	57.54	0.00	0.00	0.00	0.00	0.00
22	E1_Ae	KnownBoundary	0	0.00	6.51	18.80	16.55	11.04	37.42	34.98	31.05	27.98	28.74	20.95	12.30	0.00	17.36	9.64	35.55	22.16	65.08	13.65	30.49	24.22	9.19	16.65
23	ER1g	ExonRegion	0	2.12	28.47	50.04	38.84	20.07	106.67	52.30	47.24	56.61	59.26	58.63	21.65	18.76	71.19	46.90	62.41	55.01	192.47	54.68	64.89	65.38	21.18	52.37
24	ER1h	ExonRegion	0	17.61	53.52	54.28	71.37	43.35	123.13	90.12	56.12	61.20	71.46	58.25	24.91	38.37	86.62	72.80	60.78	73.14	120.59	61.47	75.71	65.73	30.21	42.24
25	E1_Dd	NovelBoundary	0	9.93	12.43	10.23	18.75	4.33	8.18	7.95	22.88	13.89	10.05	5.32	17.11	20.45	14.83	0.00	7.43	9.07	19.90	0.00	8.76	2.59	6.18	4.18
26	E1d_E2a	KnownJunction	0	22.37	58.28	57.77	60.83	64.94	45.03	104.67	55.08	53.01	40.96	34.11	37.51	46.43	71.34	80.10	48.53	61.24	103.22	103.63	97.86	48.99	33.74	43.19
27	I1_AR1	ActiveIntronRegion	0	1.49	9.74	1.80	10.87	8.67	11.63	19.59	1.81	9.60	4.57	2.72	7.39	10.03	3.36	5.29	3.35	1.86	2.99	0.45	6.89	0.00	1.17	2.48
28	ER2a	ExonRegion	0	25.72	63.13	62.62	79.13	64.05	56.20	146.58	42.11	64.37	41.15	47.09	59.64	48.72	86.56	71.22	55.29	63.22	109.95	60.84	90.01	43.48	35.33	42.83
29	E2_Da	NovelBoundary	0	0.00	0.00	6.95	19.11	12.22	24.42	24.60	17.95	11.26	5.13	7.21	6.30	6.98	4.83	0.00	8.12	0.00	6.72	0.00	11.76	0.00	3.12	3.16
30	E2a_E3a	KnownJunction	0	17.56	44.27	67.80	98.26	97.62	42.99	154.83	52.29	59.06	40.96	41.43	38.26	38.31	69.40	60.82	43.49	70.78	88.21	16.47	88.46	47.01	19.66	28.08
31	I2	Intron	0	13.56	23.99	10.97	20.99	18.08	22.36	24.04	12.45	13.14	14.35	6.51	13.84	17.09	9.07	10.89	11.39	10.97	10.16	7.19	16.95	2.94	2.35	4.67
32	I2_AR1	ActiveIntronRegion	0	3.74	22.37	8.84	12.28	16.52	24.34	21.40	15.19	18.21	16.62	12.04	15.53	15.60	23.47	10.19	8.56	14.85	11.83	6.48	16.78	2.01	2.83	3.86
33	I2_SR1	SilentIntronRegion	0	14.05	24.08	11.09	21.43	18.17	22.28	24.18	12.32	12.90	14.24	6.25	13.77	17.18	8.36	10.93	11.53	10.78	10.08	7.23	16.96	2.99	2.33	4.71
34	E3_Aa	NovelBoundary	1	55.27	26.77	19.75	55.80	65.37	35.60	73.27	16.14	10.56	15.98	0.00	12.15	47.24	14.60	35.60	12.13	3.83	35.90	22.49	27.68	8.28	2.45	6.49
35	ER3a	ExonRegion	0	29.33	99.31	70.12	104.19	95.06	84.75	115.74	77.10	79.07	81.81	66.17	88.28	122.47	103.83	104.94	76.08	79.68	107.59	63.99	112.02	57.62	43.81	43.09
36	E3_Da	NovelBoundary	0	6.52	21.71	17.80	25.30	38.12	8.18	56.88	13.68	3.10	8.95	2.42	12.90	6.49	0.00	0.00	3.85	0.00	22.05	16.94	17.45	0.00	0.00	4.35
37	E3a_E4a	KnownJunction	0	31.93	85.64	68.83	128.72	141.34	97.84	129.40	87.82	95.25	99.01	68.12	68.12	98.05	86.88	103.34	46.48	91.44	93.56	42.73	113.52	67.28	44.46	35.94
38	ER4a	ExonRegion	0	19.41	90.48	58.58	128.93	113.45	103.27	127.13	82.01	73.04	77.55	68.77	48.62	102.67	74.44	87.49	37.46	75.72	77.96	55.34	91.39	44.45	40.44	35.28
39	E4_Da	NovelBoundary	0	13.41	8.95	23.57	36.16	4.33	16.58	33.65	15.48	13.80	17.51	14.16	25.21	29.22	12.77	25.71	23.50	4.77	17.91	10.73	33.05	3.15	12.06	14.08
40	E4a_E5a	KnownJunction	0	10.22	96.89	61.17	88.90	131.83	49.74	76.00	62.23	63.57	52.00	46.96	75.47	73.05	64.22	90.12	27.69	61.80	52.36	60.05	80.47	38.61	39.07	33.12
41	I4	Intron	0	26.09	25.06	14.60	27.51	33.62	24.02	50.61	10.30	14.56	15.81	12.46	14.70	27.00	18.55	20.83	16.05	12.41	17.28	13.97	19.81	3.88	5.35	8.06
42	I4_SR1	SilentIntronRegion	0	26.12	25.09	14.62	27.55	33.65	24.05	50.67	10.31	14.57	15.83	12.47	14.72	27.04	18.57	20.85	16.07	12.42	17.30	13.99	19.83	3.88	5.36	8.07
43	E5_Aa	NovelBoundary	0	7.26	14.47	29.21	59.00	39.81	40.03	46.06	10.80	21.53	20.90	6.53	32.11	43.67	29.73	22.25	20.85	28.24	18.49	30.59	23.91	0.00	5.20	4.10
44	ER5a	ExonRegion	0	40.34	93.91	73.90	112.24	128.87	93.52	154.63	67.40	80.64	64.94	56.02	64.57	101.40	75.20	72.83	37.86	79.36	58.53	59.84	92.35	21.41	43.42	33.21
45	E5_Da	KnownBoundary	0	35.64	125.04	95.71	94.96	117.74	106.93	113.54	75.99	64.87	57.22	50.80	70.22	81.81	69.87	60.94	59.13	57.13	55.42	86.31	70.63	20.26	39.31	38.75
46	ER5b	ExonRegion	0	26.72	51.85	40.42	52.36	52.41	57.67	73.82	39.85	42.08	40.93	26.56	45.38	49.85	46.44	52.57	33.07	28.54	29.85	34.20	45.14	16.76	28.85	25.06
47	IG35	Intergenic	0	9.32	17.70	8.83	21.70	18.01	16.79	14.56	11.86	15.12	15.57	2.97	3.24	5.06	2.99	4.87	3.75	2.55	10.61	6.53	7.70	2.41	1.99	3.09
48	IG35_AR1	ActiveIntergenicRegion	0	20.19	53.75	39.56	63.32	49.07	52.53	86.01	35.95	32.40	40.75	15.60	50.58	31.65	23.47	29.43	13.11	10.90	17.60	19.85	29.71	8.89	12.31	7.54
49	IG35_SR1	SilentIntergenicRegion	0	12.55	25.28	9.69	13.23	19.04	39.06	53.36	4.52	8.73	6.08	12.61	12.69	10.96	11.61	15.28	12.30	13.70	24.39	17.00	10.02	6.53	11.00	12.19
50	IG35_AR2	ActiveIntergenicRegion	0	39.26	69.97	61.21	92.58	76.77	52.52	82.84	57.20	43.51	55.73	11.29	17.74	29.47	26.92	32.73	15.96	20.08	35.46	23.81	40.13	13.95	13.50	11.96
51	IG35_SR2	SilentIntergenicRegion	0	24.64	41.69	19.20	37.81	100.99	68.32	78.79	26.17	15.72	24.81	3.40	14.60	10.39	11.79	20.27	8.19	6.55	9.74	13.47	18.30	7.96	8.93	12.84
52	IG35_SR3	SilentIntergenicRegion	0	17.36	33.85	18.82	35.17	36.69	28.99	34.52	23.19	25.37	25.20	5.93	8.49	11.99	5.99	9.50	7.21	4.86	13.99	11.80	18.04	2.67	5.15	6.44
53	IG35_AR4	ActiveIntergenicRegion	0	32.73	42.28	17.41	68.45	45.56	39.13	37.44	40.09	37.02	39.84	5.38	3.49	15.54	3.76	7.29	4.76	5.55	10.93	6.01	17.94	1.60	4.68	1.74
54	IG35_SR4	SilentIntergenicRegion	0	14.97	33.91	15.65	39.12	31.03	27.34	17.93	21.78	27.52	29.03	4.80	3.52	6.44	4.32	8.20	7.03	3.30	23.74	11.37	12.08	3.70	2.69	4.81
55	IG35_AR5	ActiveIntergenicRegion	0	18.09	24.85	14.80	33.48	20.00	26.21	16.92	14.57	31.67	27.18	2.58	2.43	8.63	3.24	6.77	3.66	4.15	10.34	5.06	9.82	2.88	3.67	4.43
56	IG35_SR5	SilentIntergenicRegion	0	5.94	13.09	4.22	16.67	12.07	13.80	10.68	6.55	11.28	11.51	3.22	1.43	4.00	2.07	2.56	3.41	2.42	9.12	6.20	5.88	1.90	1.12	3.24
57	IG35_AR6	ActiveIntergenicRegion	0	11.98	18.47	4.07	17.50	23.00	11.99	10.56	11.45	16.18	16.28	0.57	3.22	11.68	0.93	1.57	0.69	1.52	4.48	8.01	3.51	1.02	1.02	0.34
58	IG35_AR8	ActiveIntergenicRegion	0	14.60	15.24	7.71	20.32	16.31	22.50	8.25	8.94	18.27	15.11	3.32	0.75	1.00	1.79	3.66	2.92	0.57	12.09	7.76	6.90	1.73	1.61	2.78