Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMBIM4 Gene 0 163.36 100.28 54.84 92.81 127.91 111.82 99.03 62.62 67.90 79.07 75.12 86.31 60.16 106.56 130.88 96.29 86.79 18.15 37.32 33.78 85.34 278.70 163.95 2 358230 Transcript 1 67.33 51.70 22.44 41.87 45.84 27.03 35.25 26.91 30.88 34.23 10.08 36.74 16.38 22.59 26.97 17.99 15.08 7.86 11.69 13.43 27.46 72.95 40.10 3 398033 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.06 0.00 4 286424 Transcript 0 3.58 1.74 1.32 2.35 4.22 1.33 5.59 4.52 2.72 2.87 2.35 13.05 18.47 3.00 1.63 4.15 9.79 1.58 3.43 1.54 1.33 4.05 9.02 5 426857 Transcript 0 39.27 14.77 6.95 11.74 15.79 10.79 13.18 12.10 12.64 9.21 10.98 3.60 0.00 2.83 16.94 17.86 19.59 2.24 13.27 7.25 12.05 89.74 30.60 6 ER1a ExonRegion 0 5.69 4.36 6.04 7.01 9.30 29.12 12.29 6.34 5.12 8.55 3.27 0.00 0.00 5.10 9.81 3.61 7.31 0.75 4.40 2.23 7.66 11.16 17.55 7 E1_Ab KnownBoundary 0 9.33 11.45 21.79 25.57 13.92 90.23 34.09 16.35 21.44 29.95 0.00 0.00 0.00 19.25 22.87 15.72 15.90 3.36 11.86 8.76 7.66 35.15 22.11 8 ER1b ExonRegion 1 244.66 91.14 29.02 41.67 209.06 363.39 172.31 26.96 30.13 57.97 95.52 4.79 7.70 152.37 171.22 212.43 170.26 12.21 38.03 28.47 182.54 341.44 369.46 9 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E1a_E3a KnownJunction 1 57.64 26.90 38.23 52.77 10.27 40.26 21.51 29.66 43.34 67.72 90.13 0.00 0.00 71.58 89.00 106.90 93.78 3.90 20.24 32.02 258.54 220.26 144.09 11 I1 Intron 0 10.06 6.40 3.15 12.83 10.29 6.07 16.82 7.20 6.52 9.32 8.38 15.19 17.04 9.66 7.10 11.22 13.54 6.47 6.09 8.04 7.29 5.20 12.19 12 I1_SR1 SilentIntronRegion 0 11.93 6.21 3.45 13.89 11.58 5.87 18.44 7.50 6.43 8.89 7.95 20.27 21.16 7.45 6.00 10.70 12.13 3.88 3.82 6.73 4.89 5.31 10.90 13 E2_Aa NovelBoundary 1 6.96 6.18 0.00 12.75 16.72 0.00 5.92 3.86 7.70 14.51 2.00 30.61 65.74 6.83 4.45 11.28 16.92 2.28 0.00 5.62 11.55 18.80 24.76 14 ER2a ExonRegion 1 10.75 5.22 3.96 5.37 8.67 3.98 16.76 8.46 6.37 7.34 7.06 32.55 55.42 6.53 4.88 8.09 24.60 2.42 10.30 4.62 3.99 6.27 22.70 15 E2_Da NovelBoundary 1 6.96 14.47 5.14 14.38 11.97 2.38 21.46 2.42 8.30 9.59 7.53 18.61 46.59 11.60 10.63 23.16 21.88 8.37 0.00 6.20 16.68 11.08 26.97 16 E2a_E3a KnownJunction 0 0.00 0.00 0.00 1.66 3.99 0.00 0.00 5.09 1.79 1.26 0.00 6.60 0.00 2.47 0.00 4.36 4.77 2.32 0.00 0.00 0.00 5.88 4.35 17 I2 Intron 0 6.27 5.20 1.43 7.41 7.87 2.79 11.94 5.35 3.82 4.16 3.53 23.98 24.69 5.50 5.85 9.94 9.12 1.66 2.18 6.63 4.13 7.71 9.90 18 I2_SR1 SilentIntronRegion 0 6.92 6.08 1.92 7.90 9.51 1.86 11.36 6.13 3.65 3.81 3.26 18.51 24.37 6.08 6.72 11.58 11.18 2.16 3.08 7.07 5.61 6.82 10.80 19 I2_AR1 ActiveIntronRegion 1 3.53 3.02 0.63 7.33 4.94 3.97 16.78 5.13 3.33 4.22 4.73 38.17 24.32 3.78 4.02 9.57 4.42 1.64 0.49 6.57 2.20 11.89 9.26 20 I2_SR2 SilentIntronRegion 0 6.85 4.46 0.62 5.87 5.35 4.70 9.11 3.01 4.91 5.27 3.21 28.15 26.15 5.25 4.83 4.87 6.97 0.00 0.86 5.24 1.14 6.53 7.54 21 ER3a ExonRegion 1 168.06 79.65 103.73 155.29 88.15 73.03 75.71 114.24 126.73 169.01 309.41 113.68 82.61 311.04 362.95 355.59 320.73 80.05 140.71 76.97 366.42 768.57 720.23 22 E3a_E4a KnownJunction 1 486.38 204.70 112.24 185.49 215.79 188.41 175.37 129.92 152.89 165.79 193.26 164.30 157.13 353.23 444.53 583.95 196.73 117.44 151.82 93.70 245.26 879.56 812.91 23 I3 Intron 0 1.50 0.56 0.20 3.22 5.55 1.20 9.18 2.81 1.41 2.99 1.16 13.39 16.81 1.59 2.03 3.89 2.34 0.00 0.00 1.16 1.44 6.26 4.49 24 I3_SR1 SilentIntronRegion 0 1.51 0.56 0.20 3.23 5.57 1.21 9.21 2.82 1.41 3.00 1.16 13.43 16.86 1.60 2.04 3.91 2.35 0.00 0.00 1.17 1.45 6.28 4.50 25 ER4a ExonRegion 0 242.38 236.66 117.28 197.82 582.00 600.12 431.34 132.49 163.28 172.08 213.35 209.49 154.28 245.50 283.56 252.71 190.86 50.71 77.65 73.58 165.69 582.84 363.12 26 E4_Da NovelBoundary 1 3.78 3.22 0.00 4.96 12.48 0.00 15.68 4.15 1.39 2.71 2.68 48.32 21.26 0.00 0.00 8.54 13.46 0.00 0.00 8.69 2.84 20.39 4.18 27 E4a_E5a KnownJunction 0 314.80 317.97 94.38 142.54 440.24 436.06 347.87 109.38 123.58 126.84 234.11 257.03 90.90 305.20 394.46 145.69 165.40 26.74 115.67 77.40 167.60 742.39 272.91 28 I4 Intron 0 15.15 3.77 3.09 9.78 13.27 5.90 15.52 5.14 4.58 4.82 6.40 27.24 33.60 12.02 8.41 17.31 15.98 3.24 2.84 6.25 6.42 20.45 12.62 29 I4_SR2 SilentIntronRegion 0 18.50 4.37 3.55 10.70 12.74 6.19 16.87 5.52 4.70 5.43 6.63 34.81 41.74 14.56 8.57 20.54 15.69 3.09 3.10 5.85 5.08 23.11 15.04 30 I4_AR2 ActiveIntronRegion 0 20.11 4.75 3.35 10.83 17.42 5.50 18.76 4.73 7.05 5.41 7.73 23.81 24.83 11.52 10.92 18.82 24.76 3.83 4.25 9.57 10.65 24.29 12.73 31 I4_SR3 SilentIntronRegion 0 8.16 2.55 3.60 7.65 8.15 5.10 11.15 3.69 2.98 3.37 7.10 16.32 22.58 9.82 6.50 14.92 17.16 4.29 2.28 4.58 7.11 14.01 11.58 32 I4_SR4 SilentIntronRegion 0 12.88 3.28 0.33 10.18 21.56 7.22 16.82 7.37 4.94 5.20 3.11 27.34 38.21 8.70 9.31 10.11 5.91 1.15 1.71 7.61 5.52 20.87 6.83 33 E5_Aa NovelBoundary 1 20.74 5.85 0.00 8.92 3.90 27.31 19.34 10.97 6.54 10.15 9.79 56.12 25.97 11.60 18.54 8.20 9.16 2.36 0.00 17.83 6.30 10.47 11.87 34 ER5a ExonRegion 0 241.28 222.50 123.22 185.87 171.33 241.36 170.40 138.17 155.48 173.62 202.22 176.74 83.32 204.88 311.97 107.52 143.49 13.48 83.29 79.04 154.32 570.46 155.38 35 E5_Da NovelBoundary 1 0.00 6.71 3.67 10.09 4.33 10.33 27.25 4.68 1.48 6.88 2.68 39.16 26.13 5.12 0.00 16.15 9.44 0.00 4.42 9.14 0.00 0.00 15.45 36 E5a_E6a KnownJunction 0 324.58 195.29 112.77 188.62 53.99 123.34 106.87 133.82 138.97 160.61 159.41 119.59 82.95 169.70 291.49 95.27 147.55 6.76 59.48 98.50 108.67 473.40 133.00 37 I5 Intron 1 6.46 5.43 1.06 5.36 12.56 6.16 16.29 3.53 7.32 6.74 8.01 38.29 46.48 14.36 3.74 16.09 12.11 2.40 1.31 8.17 6.12 19.36 12.47 38 I5_SR1 SilentIntronRegion 0 0.00 1.09 0.00 2.20 0.00 1.69 1.43 0.40 0.10 1.15 4.31 4.33 28.50 0.62 0.00 5.94 2.54 0.00 4.66 0.00 4.41 0.00 3.61 39 I5_AR1 ActiveIntronRegion 1 0.00 2.03 0.00 2.73 0.00 3.67 4.16 3.95 1.76 1.15 7.73 8.66 53.60 2.32 0.00 8.92 6.13 0.00 6.37 0.00 4.41 0.60 6.71 40 I5_SR2 SilentIntronRegion 1 4.78 4.87 0.72 6.14 12.58 6.25 17.95 3.30 6.97 6.83 6.30 43.75 51.47 12.68 2.54 12.99 9.64 1.61 0.96 7.85 3.64 21.99 10.10 41 I5_SR3 SilentIntronRegion 0 8.11 7.14 2.31 4.86 14.68 7.39 13.71 2.52 7.53 8.48 12.29 28.82 40.77 19.25 5.97 26.34 20.22 4.69 1.74 8.99 14.21 15.14 23.22 42 I5_AR2 ActiveIntronRegion 0 11.02 5.87 1.00 3.57 11.32 4.74 14.66 5.60 8.88 5.03 9.53 32.73 36.83 15.99 5.76 16.28 12.57 2.82 1.79 9.11 5.99 16.56 9.38 43 E6_Aa NovelBoundary 1 9.78 2.70 5.50 8.66 20.20 2.90 14.40 9.04 15.89 2.23 2.26 6.30 28.57 11.42 5.56 4.36 12.16 2.20 0.00 6.20 0.00 65.15 7.94 44 ER6a ExonRegion 0 360.79 151.97 159.25 250.48 262.31 219.14 172.35 175.61 173.93 204.46 243.15 246.56 198.77 344.93 402.27 234.14 224.32 24.73 80.93 90.26 131.87 798.29 304.71 45 E6_Da NovelBoundary 1 3.63 9.41 0.00 8.86 7.22 4.43 16.56 4.44 18.75 4.70 4.26 58.22 68.99 29.14 8.90 23.75 17.20 2.57 3.86 8.63 2.66 28.17 7.94 46 E6a_E7a KnownJunction 0 396.14 141.69 147.60 200.74 439.22 183.13 177.18 159.41 111.17 151.45 197.89 187.41 201.12 344.46 541.32 200.03 211.13 31.63 118.31 74.91 139.62 948.08 402.91 47 E6a_E8b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.06 0.00 48 I6 Intron 0 9.65 9.62 1.71 10.93 18.50 20.79 27.51 9.72 18.93 13.58 21.36 50.21 62.01 27.15 4.63 29.83 31.23 6.99 4.51 13.69 15.65 38.15 27.11 49 I6_AR1 ActiveIntronRegion 0 5.21 4.57 1.23 3.65 9.02 7.00 16.36 5.79 14.89 7.30 15.63 54.85 65.43 20.50 7.02 16.69 21.51 1.03 1.43 12.90 5.45 38.85 10.56 50 I6_SR1 SilentIntronRegion 0 2.28 3.75 3.68 1.78 0.00 5.50 9.06 0.13 3.23 5.03 8.92 13.32 20.20 5.25 0.00 3.66 6.86 0.00 0.00 4.09 0.68 9.62 4.29 51 I6_AR2 ActiveIntronRegion 1 11.33 7.96 2.01 11.30 15.96 22.14 29.12 14.52 29.68 20.65 36.64 66.18 105.77 37.79 5.69 47.38 54.67 8.52 7.53 17.62 29.35 55.09 51.93 52 I6_SR2 SilentIntronRegion 0 7.19 7.82 1.70 15.10 15.85 16.46 25.76 8.62 18.54 9.76 20.31 64.05 89.65 25.30 4.77 26.32 28.00 7.44 4.49 14.94 7.54 37.55 26.14 53 I6_AR3 ActiveIntronRegion 1 10.60 11.35 1.69 10.80 21.45 23.78 29.36 9.41 16.92 13.77 18.54 41.77 42.56 26.01 4.01 28.29 27.54 7.39 4.21 12.50 15.89 33.98 23.39 54 E7_Aa NovelBoundary 0 60.31 81.83 7.18 50.58 92.02 38.78 43.01 31.96 41.84 35.00 14.48 31.51 27.60 18.07 21.14 15.21 19.92 0.00 3.86 23.65 7.72 55.42 3.93 55 E7a_E7b KnownJunction 0 78.53 29.53 13.90 23.47 31.58 21.58 26.37 24.19 25.29 18.43 21.95 7.20 0.00 5.65 33.87 35.72 39.18 4.48 26.54 14.51 24.09 179.48 61.21 56 ER7a ExonRegion 0 364.04 136.09 131.30 210.51 340.64 182.53 179.75 159.95 130.45 170.01 197.60 157.53 182.19 276.48 474.91 191.82 239.95 25.02 100.95 72.99 149.34 933.90 367.76 57 ER7b ExonRegion 0 356.28 145.74 132.75 206.70 313.06 185.21 189.33 161.90 130.92 185.03 190.07 147.20 198.54 243.08 457.43 156.53 240.97 26.48 87.07 75.89 139.57 844.52 327.93 58 E7_Dc NovelBoundary 0 63.94 46.50 13.66 52.37 105.94 56.44 81.39 26.74 21.70 25.17 2.16 31.21 19.97 21.78 31.03 3.59 4.77 10.86 9.22 14.76 2.59 44.15 7.77 59 E7c_E8a KnownJunction 0 328.21 177.53 140.27 193.15 273.60 220.38 237.15 119.85 102.55 164.40 234.38 262.89 156.81 255.52 435.01 183.80 214.59 14.18 54.50 84.24 135.48 729.84 326.60 60 ER7c ExonRegion 0 334.19 150.41 151.78 213.50 277.63 184.14 185.99 153.36 134.29 175.91 197.96 211.40 175.63 235.39 424.88 163.67 252.92 22.49 72.06 79.53 142.25 791.52 319.18 61 ER7d ExonRegion 0 306.89 152.52 137.24 197.62 216.74 183.38 198.59 136.55 130.92 168.59 193.29 225.13 196.98 253.36 385.87 178.33 264.07 12.93 60.52 70.21 130.02 708.40 314.22 62 E8_Aa NovelBoundary 1 19.93 23.48 12.71 47.31 32.00 63.43 43.94 20.99 25.61 22.48 11.48 49.22 48.05 12.71 60.08 3.42 29.92 3.86 4.52 5.37 3.15 62.70 18.10 63 ER8a ExonRegion 0 241.28 150.75 123.57 183.81 199.20 166.20 179.68 122.49 114.48 160.84 177.83 154.49 138.48 238.87 305.70 187.87 234.54 9.48 58.93 54.98 132.40 588.37 273.19 64 E8_Ab KnownBoundary 0 368.14 244.43 135.18 186.79 224.28 211.64 232.21 122.36 114.23 146.10 159.94 99.93 77.59 169.64 261.08 159.36 204.02 10.99 73.13 51.20 161.61 448.17 183.02 65 ER8b ExonRegion 0 240.48 176.24 75.01 121.75 72.25 104.05 119.28 83.75 84.52 103.25 111.42 49.17 75.38 195.13 227.75 119.10 149.25 10.65 51.04 30.34 89.20 423.15 195.50 66 E8_Da KnownBoundary 0 297.39 143.07 35.81 76.31 84.80 110.79 78.12 49.41 50.12 68.66 70.39 93.18 104.86 209.20 247.73 107.58 100.61 11.32 35.39 34.96 77.10 410.57 179.09 67 ER8c ExonRegion 0 176.08 90.44 53.75 89.27 44.22 79.92 42.40 77.11 65.32 70.85 76.30 85.27 96.54 164.08 214.29 135.97 140.38 12.93 50.17 19.39 87.78 404.84 186.64 68 E8_Db KnownBoundary 0 405.33 107.09 72.79 121.76 123.94 115.05 83.25 93.20 69.76 71.00 97.13 147.50 146.91 165.99 310.03 173.46 185.23 15.17 80.57 29.66 105.45 462.50 222.29 69 ER8d ExonRegion 1 162.27 58.80 23.19 36.75 65.96 93.61 68.46 24.46 18.75 21.63 16.18 40.18 37.43 46.15 78.84 42.22 25.79 1.80 17.36 11.87 15.81 129.39 66.80 70 E8_Dc KnownBoundary 0 151.29 96.36 4.46 7.59 30.48 0.00 36.96 8.95 11.92 3.22 0.00 0.00 0.00 0.00 4.45 3.67 0.00 0.00 4.24 0.00 0.00 2.76 3.59 71 ER8e ExonRegion 1 128.97 99.04 38.85 76.74 82.39 24.94 58.21 47.49 56.64 59.92 16.89 73.48 32.76 40.08 44.14 32.38 22.86 14.97 18.99 24.63 47.26 134.73 62.65 72 E8_Dd NovelBoundary 1 48.45 83.14 38.44 42.62 75.47 30.15 30.91 47.36 15.42 41.07 0.00 106.23 12.82 4.71 8.90 0.00 4.21 1.78 8.85 13.04 3.15 19.66 7.77 73 I8 Intron 0 14.89 34.57 12.82 11.87 21.96 6.41 9.31 4.51 1.08 2.00 0.00 8.36 6.47 10.14 6.20 6.97 7.74 2.68 9.34 9.95 3.85 14.66 3.41 74 I8_AR1 ActiveIntronRegion 0 16.75 39.68 13.03 12.15 25.77 6.69 11.39 4.55 1.11 1.89 0.00 10.63 7.45 12.42 7.25 7.17 8.35 2.55 11.01 11.11 4.21 15.23 2.85 75 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 76 IG14 Intergenic 0 6.49 21.75 8.70 14.06 12.53 1.92 13.47 8.26 4.64 13.62 5.50 24.86 11.45 11.72 6.48 9.36 6.59 5.42 4.24 13.05 1.87 3.28 2.02 77 IG14_SR2 SilentIntergenicRegion 0 7.66 25.05 9.99 16.54 13.69 2.04 14.89 9.00 5.53 15.64 5.95 29.63 13.68 12.45 7.08 9.74 7.29 5.38 4.04 14.17 1.40 3.80 2.08 78 IG14_AR2 ActiveIntergenicRegion 0 2.06 9.57 3.91 4.65 8.54 1.59 8.56 5.83 1.25 6.20 4.04 6.66 2.94 9.49 4.48 8.56 4.22 5.88 5.48 9.41 4.04 1.35 1.90