Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GNS Gene 0 27.97 46.20 34.53 61.47 88.20 120.03 114.64 66.14 130.81 68.38 60.99 112.77 170.69 80.33 39.16 79.79 62.19 75.71 56.15 52.61 351.96 268.11 271.29 2 418919 Transcript 0 0.75 1.43 0.31 1.06 1.42 0.65 3.62 0.00 0.74 0.59 1.03 0.63 1.68 0.00 0.73 2.31 0.58 1.57 0.00 0.75 5.68 1.61 6.75 3 258145 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 432885 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 1 13.12 13.64 9.99 7.57 18.98 133.67 89.83 9.57 12.05 14.61 39.70 0.00 0.00 66.19 19.37 59.31 57.99 37.72 36.02 30.44 321.40 153.64 170.19 6 E1_Ab KnownBoundary 1 45.49 39.86 25.93 23.27 59.51 346.96 263.17 27.56 39.53 39.08 75.86 0.00 0.00 153.98 38.82 167.31 108.56 132.36 81.79 57.72 704.94 433.23 503.39 7 ER1b ExonRegion 0 6.76 10.60 12.67 17.02 15.69 77.40 41.69 17.24 44.37 27.92 37.73 10.42 23.23 62.56 17.86 60.50 40.06 73.02 26.33 36.35 388.13 158.27 202.78 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.36 0.00 0.00 5.37 0.00 0.00 9 E1a_E3a KnownJunction 1 14.74 12.96 25.46 49.74 72.75 208.52 151.57 38.94 102.75 52.68 37.90 12.75 13.64 88.35 5.93 57.25 69.19 90.58 85.93 57.08 367.76 195.76 200.18 10 E2_Aa NovelBoundary 0 6.96 3.35 7.54 18.45 7.39 10.11 59.62 10.60 1.50 4.54 2.68 0.00 6.82 0.00 0.00 15.81 4.11 5.72 8.19 2.43 0.00 5.76 0.00 11 ER2a ExonRegion 0 2.25 4.28 0.93 3.18 4.26 1.95 8.77 0.00 0.44 1.78 0.77 1.89 5.03 0.00 2.18 3.25 1.75 2.35 0.00 2.26 3.76 1.71 8.05 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 2.32 0.00 0.00 0.00 0.00 3.67 0.00 0.00 0.00 0.00 7.91 3.12 12.21 13 E3_Aa NovelBoundary 0 24.89 6.12 3.13 8.96 0.00 8.69 4.33 2.05 9.49 1.64 0.00 0.00 0.00 0.00 5.19 0.00 0.00 0.00 0.00 5.62 0.00 0.00 8.71 14 ER3a ExonRegion 1 10.37 41.42 29.51 49.40 65.51 236.84 194.87 45.40 140.21 76.80 77.44 39.40 121.39 114.96 13.25 67.86 85.82 91.28 58.77 62.06 550.45 309.65 296.70 15 E3_Da NovelBoundary 0 20.89 11.97 2.72 12.22 10.61 2.61 18.11 10.51 3.04 9.62 2.16 0.00 27.27 0.00 4.45 0.00 3.55 0.00 0.00 8.18 3.15 3.12 4.35 16 E3a_E4a KnownJunction 0 13.71 47.56 48.37 55.24 68.17 238.33 206.73 69.54 171.84 94.61 120.93 89.73 145.12 107.84 35.60 73.74 63.11 94.60 59.67 88.01 607.33 331.40 366.21 17 ER4a ExonRegion 0 16.33 73.62 37.04 64.39 56.03 170.51 174.36 72.21 169.29 95.01 100.35 94.63 142.81 100.99 38.25 67.63 95.66 109.51 69.30 87.32 745.30 333.92 324.41 18 E4_Da KnownBoundary 0 28.45 111.36 39.62 108.31 97.88 142.59 195.07 84.24 189.49 99.52 110.71 191.61 214.11 96.24 51.18 99.89 148.29 131.12 79.91 122.27 793.96 378.85 327.20 19 E4a_E15b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER4b ExonRegion 0 29.90 84.63 56.48 113.13 107.84 117.60 139.38 108.18 226.32 126.01 124.68 197.21 330.17 162.58 43.21 133.01 146.08 140.30 115.30 109.67 711.91 552.52 493.63 21 E4b_E5a KnownJunction 0 24.00 117.87 35.78 89.87 198.98 242.59 241.75 127.17 249.36 119.03 118.35 173.46 389.91 127.44 61.56 129.11 145.30 117.98 133.84 99.97 556.74 553.24 509.96 22 E5_Aa NovelBoundary 0 16.82 19.34 6.92 6.29 6.71 4.66 14.88 6.04 4.28 1.45 0.00 5.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.01 0.00 2.88 0.00 23 ER5a ExonRegion 0 22.83 76.11 45.28 99.43 143.92 238.00 222.87 118.11 232.01 127.48 117.44 258.78 359.14 134.46 69.72 135.82 154.89 128.03 125.00 107.54 607.22 621.61 501.05 24 E5_Da NovelBoundary 0 19.19 17.43 11.62 3.66 7.72 5.28 22.83 10.51 3.82 2.71 0.00 0.00 0.00 0.00 0.00 8.63 0.00 2.40 4.14 11.44 0.00 2.51 0.00 25 E5a_E6a KnownJunction 0 25.56 73.74 53.07 125.72 187.18 281.94 279.77 123.92 237.87 139.63 112.19 308.20 470.42 174.53 47.22 165.08 126.88 134.35 109.46 115.24 482.30 754.64 554.35 26 E6_Aa NovelBoundary 0 20.37 3.35 9.08 1.90 11.71 8.46 26.76 12.86 1.79 4.14 0.00 0.00 13.64 0.00 12.36 0.00 0.00 2.24 9.60 2.88 0.00 0.00 0.00 27 ER6a ExonRegion 0 36.00 83.48 61.99 124.27 153.06 213.42 267.73 138.52 268.51 137.52 145.61 326.24 434.42 206.20 64.59 169.83 157.31 169.47 115.48 120.57 704.05 700.08 622.84 28 E6a_E7a KnownJunction 0 16.45 107.61 78.97 122.66 121.48 177.23 198.95 171.57 319.67 146.59 156.09 326.36 471.07 206.37 69.84 134.07 185.51 165.69 68.33 88.01 858.95 670.51 654.65 29 ER7a ExonRegion 0 24.94 110.96 66.37 108.97 144.16 207.92 207.51 124.07 263.90 133.32 119.97 296.44 382.57 197.95 78.28 157.31 137.64 141.13 101.02 132.64 753.17 594.98 562.21 30 E7_Da NovelBoundary 0 15.93 18.09 9.85 22.81 0.00 21.12 20.14 8.83 2.75 9.86 0.00 0.00 6.82 2.47 10.75 4.36 4.21 13.60 3.95 12.02 20.57 2.39 7.68 31 E7a_E8a KnownJunction 0 25.63 105.18 75.22 111.51 127.42 324.25 241.22 136.32 298.84 154.94 159.15 472.20 463.12 218.44 130.17 210.03 153.34 191.80 112.57 141.07 808.23 684.65 641.93 32 I7 Intron 0 4.62 6.29 5.94 16.99 8.91 8.65 16.54 5.01 6.35 5.49 1.61 3.41 6.73 1.92 3.82 4.48 2.62 4.34 4.67 6.41 4.02 5.04 10.60 33 I7_SR1 SilentIntronRegion 0 4.62 6.30 5.95 17.02 8.93 8.67 16.56 5.01 6.36 5.50 1.61 3.42 6.74 1.92 3.82 4.49 2.62 4.34 4.68 6.42 4.03 5.05 10.61 34 E8_Aa NovelBoundary 0 48.16 6.38 12.71 31.60 11.54 7.33 34.58 15.98 10.33 7.90 2.68 17.71 7.63 2.12 4.45 7.60 4.77 6.26 4.80 16.23 0.00 3.12 12.38 35 ER8a ExonRegion 0 55.23 76.15 50.37 91.40 178.69 293.19 284.94 119.58 283.44 140.06 178.97 324.03 398.48 254.91 80.22 175.18 137.01 154.21 105.96 139.04 845.24 605.75 678.05 36 E8_Da NovelBoundary 0 10.67 9.60 4.76 28.83 20.03 2.16 27.43 10.19 10.53 3.33 0.00 0.00 6.82 2.12 6.30 3.33 4.77 3.48 0.00 5.69 7.66 17.39 16.30 37 E8a_E9a KnownJunction 0 43.93 65.91 36.99 97.66 184.64 231.91 275.88 93.85 264.81 129.53 139.72 289.89 324.49 236.10 57.48 180.81 114.07 142.97 120.66 142.98 712.35 559.92 567.66 38 ER9a ExonRegion 0 34.52 98.09 55.45 117.55 143.25 230.95 219.51 134.76 309.30 138.33 163.66 360.22 466.48 200.78 72.36 218.41 149.01 202.04 132.74 119.42 847.78 656.27 685.25 39 E9a_E10a KnownJunction 0 29.56 98.14 55.53 128.62 244.65 211.36 262.15 128.11 344.85 147.58 160.25 386.98 449.81 189.48 82.45 234.47 117.62 163.99 138.17 153.78 956.13 725.13 665.06 40 E10_Aa NovelBoundary 0 3.78 3.22 0.00 3.66 4.33 2.90 50.43 4.48 2.43 1.58 0.00 0.00 6.82 0.00 0.00 0.00 4.49 0.00 0.00 3.26 3.03 3.12 3.41 41 ER10a ExonRegion 0 42.19 68.71 66.70 111.99 170.68 200.03 207.02 154.20 297.88 163.44 157.46 308.14 406.54 202.81 76.74 236.88 149.56 219.44 141.96 126.43 975.95 648.74 707.73 42 E10_Da NovelBoundary 0 0.00 10.00 7.13 15.22 4.33 2.61 8.61 24.36 8.07 10.40 4.90 12.00 18.51 4.94 0.00 45.97 17.67 11.36 4.80 12.14 4.82 5.45 19.21 43 E10a_E11a KnownJunction 0 49.56 67.03 67.74 121.50 182.51 205.62 189.99 175.14 361.54 205.87 170.20 316.30 438.61 201.01 103.47 248.65 112.01 262.19 119.72 117.61 1042.49 793.22 799.68 44 I10_AR1 ActiveIntronRegion 0 13.80 8.92 4.86 9.29 11.60 11.96 11.84 10.44 5.59 4.32 2.45 2.31 4.76 4.23 1.18 4.47 7.60 9.49 4.14 7.95 9.24 5.51 7.18 45 I10_AR2 ActiveIntronRegion 0 11.92 8.75 0.60 4.04 22.15 9.72 9.21 8.55 4.88 1.70 2.56 3.80 14.16 4.02 4.63 1.97 3.28 2.44 2.11 5.64 2.19 6.21 4.86 46 I10_SR2 SilentIntronRegion 0 5.86 9.59 4.92 8.81 18.44 11.25 19.90 11.19 11.44 5.38 2.90 9.29 14.25 1.95 3.03 3.78 7.91 2.21 1.91 7.01 2.15 6.09 7.91 47 E11_Aa NovelBoundary 0 14.52 10.06 2.96 10.09 16.81 10.22 39.08 13.92 21.47 7.74 0.00 0.00 13.64 2.41 6.30 8.20 8.79 8.00 3.76 14.45 11.12 2.88 15.45 48 ER11a ExonRegion 0 44.70 77.81 64.82 127.54 171.04 270.49 221.34 147.14 315.83 178.97 163.61 285.11 366.56 190.50 76.74 263.91 148.35 247.51 149.65 150.27 1107.67 664.58 724.89 49 E11a_E12a KnownJunction 0 56.60 81.76 51.18 113.31 245.42 229.87 260.12 132.67 317.24 173.64 166.04 295.90 284.72 221.44 67.50 265.57 166.25 204.66 194.92 135.12 1065.23 606.21 752.65 50 E11a_E13a NovelJunction 0 0.00 15.59 1.51 2.06 0.00 6.93 5.21 0.00 13.45 1.50 2.68 0.00 0.00 0.00 0.00 0.00 0.00 5.14 0.00 6.07 27.43 16.35 3.41 51 ER12a ExonRegion 0 50.56 68.97 61.68 126.67 160.02 270.32 218.40 151.70 340.34 186.12 138.08 198.11 325.13 195.38 90.29 213.33 126.41 242.17 133.37 145.25 937.92 602.60 764.04 52 E12_Da NovelBoundary 0 0.00 5.92 15.91 7.33 3.65 2.90 9.89 14.13 11.46 4.59 0.00 0.00 0.00 7.36 0.00 3.93 0.00 12.10 4.80 5.62 0.00 5.57 11.61 53 E12a_E13a KnownJunction 0 58.38 88.34 50.80 127.52 211.04 379.84 232.87 167.09 337.29 160.58 150.88 176.01 387.64 201.07 107.79 182.00 155.96 208.30 76.05 138.32 953.47 521.89 703.05 54 ER13a ExonRegion 0 52.00 83.03 62.78 119.63 214.71 283.91 251.77 155.98 335.63 168.66 162.96 204.93 305.95 176.56 78.60 209.55 152.14 203.55 173.10 108.40 805.13 597.39 756.01 55 E13a_E14a KnownJunction 0 37.64 101.30 69.42 121.73 182.51 265.81 212.03 184.30 350.89 171.51 139.56 191.31 302.58 158.04 53.40 216.18 106.31 217.55 189.65 127.32 682.39 562.92 834.77 56 ER14a ExonRegion 0 63.71 84.98 74.18 143.56 203.92 270.72 218.35 183.83 341.71 176.27 142.55 222.98 405.61 191.62 83.22 192.01 153.26 199.29 168.49 109.26 894.92 645.81 762.54 57 E14_Da NovelBoundary 0 14.45 0.00 1.15 0.00 15.28 8.57 17.40 11.01 3.53 0.00 0.00 19.96 6.82 2.35 0.00 7.43 8.79 15.21 3.58 18.79 0.00 0.00 12.29 58 E14a_E15a KnownJunction 0 92.24 138.00 63.07 121.63 233.02 416.24 330.60 187.63 300.17 144.71 156.46 308.50 492.18 195.89 71.82 219.94 122.02 194.25 229.47 117.22 939.94 668.61 847.06 59 E15_Aa NovelBoundary 0 13.71 15.19 8.69 19.41 15.70 27.54 25.00 2.55 5.56 4.46 2.37 0.00 6.82 0.00 6.30 12.13 4.11 4.39 0.00 3.07 0.00 8.70 8.19 60 ER15a ExonRegion 0 65.65 98.11 75.64 129.34 196.16 227.15 229.88 126.15 229.84 118.19 90.44 188.87 311.83 108.65 64.13 117.61 91.78 102.60 86.17 77.45 461.19 423.33 386.18 61 E15_Ab KnownBoundary 0 55.64 8.16 2.93 0.00 43.72 16.13 6.14 4.60 6.19 4.65 7.58 6.30 6.66 0.00 4.45 12.13 0.00 9.00 0.00 0.00 11.74 13.53 19.12 62 ER15b ExonRegion 0 17.13 0.92 0.00 0.00 0.00 0.30 0.00 0.00 0.00 0.00 0.00 1.70 3.29 4.50 7.33 0.00 0.00 0.00 0.00 0.00 6.68 0.56 0.00 63 E15_Da KnownBoundary 0 17.34 6.12 7.13 7.92 19.69 9.71 1.90 8.38 8.83 1.64 15.32 18.16 14.45 7.30 13.35 0.00 8.42 5.64 0.00 2.56 29.71 6.12 24.16 64 ER15c ExonRegion 0 3.87 2.05 1.16 1.24 2.63 2.47 2.44 1.14 1.08 0.88 0.62 5.15 4.67 4.17 11.32 1.74 0.97 0.14 1.25 1.30 4.41 1.81 2.95 65 IG3_AR2 ActiveIntergenicRegion 0 227.78 21.29 29.37 42.59 171.21 29.63 124.80 44.92 23.23 20.01 104.85 211.82 160.26 131.30 172.39 70.16 67.57 3.49 17.24 18.33 31.10 54.04 26.59 66 IG3_SR2 SilentIntergenicRegion 0 21.13 4.42 24.46 33.03 33.05 6.25 38.11 48.37 33.36 19.33 143.15 97.09 121.83 212.61 140.04 166.32 114.83 13.71 43.73 20.27 81.66 74.94 42.32 67 IG3_AR1 ActiveIntergenicRegion 0 95.66 9.79 30.75 30.07 84.89 30.41 99.04 51.68 35.44 25.64 199.73 212.30 197.47 320.64 156.78 199.78 161.78 21.53 62.38 23.88 153.20 80.55 60.08 68 IG3_SR1 SilentIntergenicRegion 0 20.86 2.98 2.93 13.00 40.53 14.27 39.69 18.84 11.63 5.12 62.14 132.63 146.76 127.55 55.05 53.86 53.94 3.88 15.38 4.72 34.61 19.62 18.62