Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	RAB3IP	Gene	0	18.03	28.05	19.71	18.88	35.98	36.48	54.47	33.29	33.94	38.91	23.39	27.14	33.81	22.15	21.13	13.85	20.58	7.33	24.31	26.62	1.69	5.30	5.11
2	378815	Transcript	0	4.90	5.57	1.29	1.57	6.41	2.73	15.27	4.79	4.93	6.08	3.72	12.75	16.92	6.41	10.83	6.68	5.89	2.02	4.25	5.24	0.78	2.13	3.24
3	417413	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	247833	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	483530	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	393355	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	362025	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	378809	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	325555	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	325596	Transcript	0	10.63	20.50	12.96	11.63	23.80	23.71	29.00	23.22	23.80	24.56	10.59	11.22	14.93	8.83	10.43	7.39	10.69	4.66	15.53	15.56	0.89	2.44	2.70
11	481897	Transcript	0	12.61	13.48	5.30	8.44	10.97	7.09	27.85	6.04	7.14	7.74	14.38	12.55	16.49	7.65	7.45	7.76	14.23	1.91	6.77	5.26	0.75	3.60	1.20
12	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.49	0.35	0.00	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER1b	ExonRegion	0	6.96	9.87	6.48	5.35	22.01	64.87	42.46	8.85	6.08	22.88	18.23	1.15	3.96	12.03	12.60	14.61	22.06	11.79	15.84	12.52	4.00	1.20	9.78
14	E1a_E4a	KnownJunction	0	0.00	3.09	3.02	11.49	0.00	2.56	0.00	7.48	8.77	37.36	28.11	18.61	28.24	12.01	9.77	20.17	49.37	2.11	0.00	21.03	11.37	2.57	0.00
15	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER2b	ExonRegion	0	0.70	0.00	0.40	0.45	0.30	0.20	0.73	0.29	0.60	1.53	2.88	0.23	1.38	6.47	3.72	1.57	4.86	0.00	1.05	0.71	0.49	0.23	0.00
17	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.22	4.84	12.60	6.66	17.01	4.45	3.76	4.58	0.00	0.00	0.00	0.00	0.00	0.00
18	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER4a	ExonRegion	0	10.40	11.51	17.88	19.07	28.02	73.30	82.07	40.32	38.85	72.89	115.74	61.38	98.93	87.63	50.06	51.01	88.18	20.04	53.41	60.87	6.61	12.61	18.83
20	E4a_E5a	KnownJunction	0	62.90	28.61	29.98	35.06	31.83	22.88	100.16	50.77	43.55	60.14	93.76	94.23	100.16	99.18	65.39	52.21	96.03	18.28	35.11	91.21	3.03	10.47	12.21
21	ER5a	ExonRegion	0	28.27	29.67	27.01	24.70	36.46	72.91	122.28	56.67	43.35	67.57	104.26	97.05	172.88	96.87	53.35	42.48	87.54	13.29	43.86	56.00	3.63	12.69	10.64
22	E5a_E6b	KnownJunction	0	12.00	30.78	18.89	33.43	49.07	89.04	226.11	53.44	40.48	68.63	114.98	121.39	191.87	52.98	94.07	52.72	91.26	10.69	26.73	55.48	0.00	12.80	11.44
23	ER6a	ExonRegion	0	0.76	2.03	1.40	2.04	4.20	5.37	13.62	3.21	3.18	4.59	9.11	8.04	10.39	4.06	5.18	4.25	7.07	0.92	3.41	3.95	0.16	1.04	0.63
24	ER6b	ExonRegion	0	17.13	26.14	37.42	34.86	68.25	81.36	155.01	40.68	44.59	72.17	108.34	115.57	199.75	76.69	64.04	68.77	88.15	22.25	55.56	58.75	7.42	12.46	16.41
25	E6_Da	NovelBoundary	0	3.70	0.00	5.35	0.00	0.00	0.00	8.08	1.81	6.13	6.04	12.06	6.45	34.74	4.65	4.45	0.00	8.60	0.00	0.00	5.69	0.00	0.00	0.00
26	E6a_E7a	KnownJunction	1	48.53	38.55	47.54	57.67	89.64	122.54	205.00	55.41	59.46	75.97	137.61	73.37	221.09	84.58	66.14	48.11	105.10	16.66	71.15	59.00	3.09	19.47	15.19
27	I6_AR1	ActiveIntronRegion	1	3.80	2.06	4.50	0.66	4.69	0.97	18.02	4.81	4.85	1.88	3.60	6.14	40.70	5.06	2.46	3.27	6.83	0.00	5.27	1.64	0.00	3.22	0.00
28	I6_AR2	ActiveIntronRegion	0	1.21	0.00	2.45	1.36	4.97	0.00	11.16	8.15	1.24	1.15	1.93	12.99	25.46	0.00	0.00	0.00	0.00	3.70	15.02	0.00	0.00	2.38	2.94
29	I6_AR3	ActiveIntronRegion	0	2.12	0.00	2.45	2.73	2.68	0.00	10.59	6.13	1.35	1.04	1.41	4.72	21.74	0.00	0.00	0.00	0.00	2.02	6.37	2.13	0.00	1.14	2.94
30	I6_AR4	ActiveIntronRegion	1	2.00	0.00	2.72	5.45	2.38	0.00	17.87	5.76	2.81	1.59	0.00	6.73	23.45	0.00	0.00	0.00	0.00	3.70	6.37	2.13	0.00	3.36	0.82
31	I6_AR7	ActiveIntronRegion	0	1.90	0.23	1.64	1.85	1.50	0.41	7.80	3.22	0.41	2.44	1.73	11.27	18.60	1.91	1.15	0.72	2.98	0.21	1.20	3.34	0.00	0.23	0.33
32	ER7a	ExonRegion	0	22.28	34.73	38.46	51.23	75.47	116.23	168.23	42.39	48.15	81.62	139.64	122.17	174.19	84.72	75.28	55.17	99.37	21.89	61.91	82.84	6.84	18.19	17.66
33	E7a_E8a	KnownJunction	0	38.08	47.75	41.16	53.07	75.89	136.06	172.41	48.63	43.92	76.64	100.13	189.06	202.10	97.48	63.91	76.73	110.89	25.00	82.26	98.50	17.17	7.78	28.00
34	ER8a	ExonRegion	0	41.04	43.45	42.64	34.21	72.93	91.04	170.62	45.19	46.91	71.74	96.41	157.47	159.53	96.34	81.02	53.34	91.00	18.65	60.46	66.03	3.74	14.32	12.65
35	E8_Da	KnownBoundary	0	0.00	2.83	0.00	1.80	0.00	0.00	25.53	3.86	3.30	4.57	5.16	0.00	6.82	6.83	0.00	11.71	4.77	0.00	0.00	0.00	0.00	0.00	0.00
36	E8a_E9a	KnownJunction	0	37.86	48.35	50.09	17.55	119.19	92.84	205.75	42.39	50.81	52.73	67.12	127.39	129.05	70.40	89.00	34.52	52.55	15.55	58.07	35.99	0.00	13.41	3.59
37	E8a_E11b	KnownJunction	0	7.11	3.22	0.00	0.00	0.00	0.00	10.64	2.05	1.65	0.00	0.00	0.00	6.82	2.47	0.00	0.00	4.77	0.00	0.00	0.00	0.00	0.00	0.00
38	ER8b	ExonRegion	0	4.90	5.57	1.29	1.57	6.41	2.73	15.27	4.79	4.93	6.08	3.72	12.75	16.92	6.41	10.83	6.68	5.89	2.02	4.25	5.24	0.78	2.13	3.24
39	E8_Db	NovelBoundary	0	0.00	0.00	1.83	0.00	0.00	0.00	17.40	10.47	4.98	6.04	2.68	15.30	23.38	2.47	4.82	0.00	0.00	0.00	0.00	3.26	0.00	5.45	3.59
40	I8_SR1	SilentIntronRegion	0	2.04	1.47	2.20	3.43	3.44	3.98	14.89	8.48	2.51	7.41	1.40	13.19	23.75	3.10	5.69	1.67	1.33	0.22	1.53	4.10	0.00	2.51	0.24
41	E9_Aa	NovelBoundary	0	10.82	6.18	1.48	0.00	0.00	2.67	4.42	9.16	1.79	4.19	2.68	0.00	20.45	2.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER9a	ExonRegion	0	37.80	49.74	37.73	27.10	92.66	89.43	168.93	52.94	47.88	71.91	98.77	120.18	108.45	96.44	89.89	46.45	75.51	10.30	63.73	51.95	5.86	16.39	11.61
43	E9a_E10a	KnownJunction	0	52.38	50.45	31.93	36.16	108.66	61.56	196.48	65.51	50.69	70.59	90.81	105.03	46.59	97.24	134.25	35.29	64.52	8.29	79.53	62.89	2.59	13.90	7.94
44	E10_Aa	NovelBoundary	0	3.78	0.00	0.00	0.00	0.00	0.00	23.36	0.00	2.98	1.32	2.26	0.00	12.99	2.47	5.07	7.26	8.23	0.00	0.00	0.00	0.00	0.00	3.50
45	ER10a	ExonRegion	0	43.47	41.45	31.74	32.40	78.12	48.34	142.02	60.47	48.17	68.22	105.11	81.38	92.02	92.57	85.55	25.64	57.84	7.60	55.84	55.51	4.27	15.01	4.65
46	E10a_E11b	KnownJunction	0	77.87	81.83	42.84	38.72	97.54	61.61	180.32	62.35	44.21	85.64	103.39	73.37	90.58	66.81	57.98	39.56	81.81	4.19	53.46	75.04	5.07	14.63	16.73
47	E10a_E11c	KnownJunction	0	0.00	0.00	0.00	0.00	11.63	0.00	1.90	0.00	0.00	3.95	4.90	6.30	0.00	4.94	24.35	0.00	0.00	0.00	4.80	3.07	0.00	0.00	0.00
48	I10	Intron	0	2.55	2.10	2.10	3.32	4.17	4.21	15.88	5.67	4.98	4.96	4.70	7.76	15.99	4.38	4.43	4.92	10.09	0.74	3.22	4.47	0.30	1.87	1.31
49	I10_SR1	SilentIntronRegion	0	2.56	2.10	2.10	3.32	4.17	4.22	15.89	5.67	4.98	4.96	4.71	7.77	16.01	4.38	4.43	4.92	10.09	0.74	3.23	4.48	0.30	1.87	1.32
50	E11_Aa	NovelBoundary	0	3.33	6.71	3.05	3.00	3.99	32.08	35.46	2.14	7.64	8.06	6.84	0.00	13.64	2.47	4.45	4.36	27.77	1.91	3.86	2.81	3.09	0.00	0.00
51	ER11a	ExonRegion	0	12.86	5.47	4.49	6.98	9.64	7.78	24.08	5.76	7.68	6.86	13.25	13.17	23.32	6.91	6.76	12.04	15.42	1.99	4.49	4.96	0.19	3.20	2.26
52	E11_Ab	KnownBoundary	0	37.34	0.00	8.72	13.15	10.53	12.55	47.78	4.15	12.07	6.37	10.37	0.00	6.82	4.83	20.15	12.30	20.10	0.00	0.00	6.46	2.41	0.00	0.00
53	ER11b	ExonRegion	0	65.63	62.49	42.29	60.42	92.98	75.32	176.41	74.31	60.20	81.46	89.79	56.72	92.24	95.28	105.00	47.94	73.92	13.81	50.35	64.73	3.54	17.45	12.58
54	E11_Da	KnownBoundary	0	13.26	6.25	5.06	15.22	3.48	8.46	45.89	7.39	7.84	6.23	2.63	5.85	6.49	11.89	5.07	7.86	18.33	0.00	7.72	3.26	0.00	2.88	0.00
55	E11a_E11c	KnownJunction	0	36.90	59.99	46.92	47.35	82.85	74.16	178.77	86.83	67.59	67.56	95.55	88.23	78.89	100.71	119.17	30.85	36.93	19.65	55.91	63.98	5.62	21.55	12.21
56	ER11c	ExonRegion	0	12.36	21.48	6.10	9.90	12.30	6.41	31.62	6.32	6.60	8.62	15.51	11.94	9.65	8.38	8.14	3.48	13.05	1.83	9.04	5.55	1.32	4.00	0.14
57	E11_Ac	KnownBoundary	0	15.63	12.04	1.18	14.32	15.62	4.66	43.50	5.09	5.90	8.60	14.74	6.30	40.58	9.71	13.60	3.93	0.00	0.00	23.25	3.20	0.00	4.59	0.00
58	ER11d	ExonRegion	0	46.90	52.96	47.68	46.77	104.04	98.71	223.31	68.31	58.34	83.24	112.00	120.60	105.76	113.43	122.61	31.87	59.66	11.70	61.95	70.06	4.31	15.22	10.47
59	E11b_E12a	KnownJunction	0	50.75	58.74	51.74	48.31	78.18	62.52	224.26	51.71	40.62	83.62	78.02	103.08	66.72	69.34	103.22	11.28	41.80	10.86	30.21	72.67	8.46	23.51	7.17
60	I11	Intron	0	5.99	1.31	1.59	3.43	8.10	3.05	15.34	6.26	3.01	3.43	4.70	10.54	17.31	2.72	3.25	4.50	5.32	1.25	1.34	2.37	0.11	1.55	1.02
61	I11_SR1	SilentIntronRegion	0	0.50	0.65	0.00	0.69	5.10	0.87	14.46	3.02	1.70	1.92	2.30	16.75	10.15	2.86	0.49	3.44	3.90	0.00	0.18	2.17	0.00	1.26	0.70
62	I11_AR1	ActiveIntronRegion	0	1.45	0.85	1.46	2.91	4.57	1.67	12.08	5.01	3.80	2.59	3.52	13.63	13.81	1.50	2.29	3.77	4.52	1.47	1.37	2.11	0.00	2.01	0.67
63	I11_SR2	SilentIntronRegion	0	4.26	1.15	1.32	3.68	8.18	3.07	14.02	6.97	2.60	3.47	2.27	8.44	16.85	2.55	2.45	4.28	3.86	0.15	1.25	0.91	0.00	0.97	0.24
64	I11_AR2	ActiveIntronRegion	0	11.67	1.92	2.33	4.30	10.98	4.47	18.65	7.35	3.28	4.34	8.11	8.76	21.82	3.56	5.26	5.42	7.43	2.41	1.74	3.82	0.30	1.85	1.98
65	E12_Aa	NovelBoundary	0	13.11	0.00	4.26	1.56	0.00	0.00	6.18	9.04	5.90	8.00	15.06	23.41	13.80	2.47	15.82	0.00	0.00	0.00	4.71	0.00	0.00	3.06	0.00
66	ER12a	ExonRegion	0	42.27	32.09	33.21	37.93	54.69	46.81	115.25	53.17	37.90	71.14	70.65	63.33	53.69	57.31	66.97	25.70	30.22	13.01	40.78	37.12	3.43	18.93	11.75
67	E12_Da	KnownBoundary	0	6.37	0.00	21.11	23.61	16.21	5.56	64.92	28.88	29.63	41.61	35.85	37.66	19.32	21.13	33.38	16.83	38.52	7.75	16.47	49.98	0.00	0.00	3.67
68	ER12b	ExonRegion	0	12.86	22.00	18.80	22.54	33.99	29.39	70.36	28.21	35.31	39.95	13.75	34.40	31.56	13.94	10.58	6.98	10.07	4.26	18.20	31.75	0.48	5.77	2.55
69	E12_Db	KnownBoundary	0	0.00	3.35	0.00	1.93	0.00	28.39	32.24	5.83	18.29	22.46	4.69	0.00	18.51	0.00	0.00	0.00	0.00	0.00	0.00	8.56	0.00	8.08	0.00
70	E12_Dc	KnownBoundary	0	3.19	6.05	2.72	8.89	12.05	28.17	18.15	19.18	20.25	6.69	2.47	0.00	12.66	2.41	0.00	0.00	0.00	2.45	0.00	14.25	0.00	8.14	4.35
71	ER12c	ExonRegion	1	6.35	14.24	3.68	10.90	27.65	48.29	57.81	28.23	33.76	30.97	7.73	31.75	43.77	4.87	8.70	0.00	0.00	1.85	0.00	17.02	0.00	14.58	2.94
72	ER12d	ExonRegion	0	20.50	38.96	24.52	21.21	43.39	42.04	44.39	43.23	44.42	44.54	12.07	14.39	19.48	13.60	15.68	10.54	14.31	8.39	27.65	27.16	1.62	3.85	4.77
73	IG49_AR4	ActiveIntergenicRegion	0	0.00	1.66	0.00	1.35	0.36	3.40	0.18	0.00	14.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.72	2.66	0.00	2.61	0.00	0.00
74	IG49_AR7	ActiveIntergenicRegion	0	0.00	2.73	0.73	6.43	0.83	1.87	0.82	0.00	24.29	0.53	0.60	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.65	0.00