Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	CCDC53	Gene	0	218.51	133.67	154.66	101.48	222.22	216.09	150.77	145.81	106.56	119.90	90.91	172.33	142.84	121.80	135.33	168.04	110.78	77.81	104.56	98.64	114.35	129.45	75.23
2	240079	Transcript	0	204.14	132.28	197.21	121.31	259.74	243.92	162.39	190.43	133.23	159.28	110.49	177.00	121.65	151.59	168.00	209.25	114.91	101.85	135.71	126.03	136.42	151.18	100.58
3	ER1a	ExonRegion	1	227.89	146.99	34.77	16.06	123.12	244.19	132.86	39.89	35.35	39.13	47.54	2.78	12.04	44.36	50.88	145.59	49.37	71.51	75.24	47.49	75.60	53.86	82.28
4	E1a_E2a	KnownJunction	0	73.72	65.32	82.37	29.30	85.40	109.48	89.65	126.02	101.50	104.47	21.85	12.00	13.15	14.13	19.41	77.50	32.35	106.16	64.28	29.34	36.20	62.21	22.02
5	I1	Intron	0	10.51	2.75	4.45	2.20	6.52	8.77	11.23	7.21	5.15	6.94	5.41	23.10	26.87	10.71	21.83	15.56	33.67	4.07	4.03	6.34	6.56	2.07	5.30
6	I1_SR1	SilentIntronRegion	0	1.24	0.91	2.12	0.81	2.09	7.81	6.47	6.58	3.94	6.92	4.58	12.47	7.24	9.74	15.86	14.46	24.14	3.59	2.50	4.92	7.32	3.26	7.29
7	I1_AR1	ActiveIntronRegion	1	18.59	4.36	6.49	3.41	10.39	9.67	15.43	7.80	6.23	7.01	6.16	32.43	44.01	11.62	27.13	16.61	42.12	4.50	5.37	7.61	5.95	1.06	3.62
8	E2_Aa	NovelBoundary	1	12.30	3.29	14.52	4.89	8.66	10.62	7.29	11.83	4.66	6.02	7.11	45.01	72.72	4.94	13.60	12.73	43.01	1.95	16.85	5.88	0.00	11.39	7.85
9	ER2a	ExonRegion	0	94.56	62.38	105.34	44.25	82.00	68.00	54.58	90.87	84.86	94.51	93.70	67.17	69.36	72.27	72.06	82.41	109.93	65.08	60.84	85.02	138.05	57.54	40.61
10	E2_Da	NovelBoundary	1	0.00	0.00	5.14	7.09	3.65	0.00	0.00	12.73	6.11	7.33	18.37	20.86	40.09	2.24	8.90	6.66	52.45	0.00	4.33	0.00	0.00	2.51	7.68
11	E2a_E3a	KnownJunction	0	70.90	56.50	242.69	94.56	117.06	67.06	67.61	174.85	131.36	174.76	139.98	54.32	46.43	175.53	196.06	195.93	156.62	112.38	134.78	170.59	232.72	125.71	82.72
12	I2	Intron	1	2.74	1.12	1.70	2.23	2.49	0.74	5.14	2.36	1.73	1.68	5.47	26.66	52.55	5.91	10.96	7.83	24.93	0.59	0.69	2.17	1.25	1.26	1.62
13	I2_AR1	ActiveIntronRegion	1	3.94	2.17	3.18	3.27	2.42	0.81	8.13	9.89	5.03	5.47	11.45	21.09	49.04	4.02	22.53	7.87	32.21	2.37	1.40	2.24	4.84	0.92	4.56
14	I2_SR1	SilentIntronRegion	0	3.49	2.07	2.80	3.17	3.55	1.05	4.79	4.61	3.71	4.01	6.00	23.49	33.26	4.19	10.32	8.47	23.96	0.42	0.81	1.59	0.98	0.90	1.58
15	I2_AR3	ActiveIntronRegion	0	4.18	0.67	2.07	3.17	1.24	0.00	5.77	2.12	0.68	5.61	5.70	21.37	25.60	5.13	8.25	11.45	22.34	1.51	0.82	6.96	2.33	1.85	4.13
16	I2_SR2	SilentIntronRegion	1	1.22	2.40	1.16	4.05	2.81	0.00	3.05	1.71	1.56	3.94	6.86	23.49	38.43	3.98	8.65	7.82	32.47	1.76	1.23	4.07	1.43	1.99	3.29
17	I2_SR3	SilentIntronRegion	1	3.45	1.04	2.37	2.59	2.52	0.70	7.39	2.69	2.02	1.18	6.85	23.84	52.89	7.52	7.58	10.00	29.19	0.80	1.22	2.98	1.80	2.12	2.24
18	I2_SR5	SilentIntronRegion	1	1.79	0.69	0.66	1.50	2.15	0.82	3.59	0.98	0.78	0.65	3.85	31.40	64.69	5.79	14.18	6.17	22.29	0.29	0.20	1.22	0.61	0.66	0.75
19	E3_Aa	NovelBoundary	1	6.82	2.50	0.00	0.00	0.00	4.26	5.83	0.00	0.00	0.00	0.00	41.71	61.36	7.06	11.62	7.95	4.77	0.00	0.00	0.00	0.00	0.00	0.00
20	ER3a	ExonRegion	0	105.47	64.30	223.00	124.21	275.72	350.20	150.85	207.57	150.70	178.29	118.38	119.39	87.97	198.19	214.52	384.39	129.04	172.90	248.55	185.98	169.59	215.64	226.79
21	E3_Da	NovelBoundary	1	0.00	0.00	1.66	2.06	3.31	0.00	6.76	0.00	0.00	0.00	0.00	30.01	109.57	2.47	6.30	12.48	8.13	0.00	0.00	0.00	0.00	0.00	0.00
22	E3a_E4a	KnownJunction	1	190.77	111.89	207.00	140.01	618.42	624.98	256.72	217.45	164.47	165.58	115.77	179.16	118.01	171.46	161.82	498.33	100.23	188.12	276.62	209.58	156.73	213.46	347.17
23	I3	Intron	1	0.47	0.75	0.27	0.45	0.30	0.07	1.22	0.47	0.41	0.06	4.13	42.96	56.29	7.65	10.09	6.02	22.49	0.00	0.00	0.55	0.16	0.15	0.43
24	I3_SR1	SilentIntronRegion	1	0.47	0.75	0.27	0.45	0.30	0.07	1.22	0.48	0.41	0.06	4.14	43.05	56.38	7.66	10.11	6.03	22.54	0.00	0.00	0.55	0.16	0.15	0.43
25	E4_Aa	NovelBoundary	1	7.11	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.75	0.00	2.37	5.85	52.76	14.30	22.62	0.00	42.17	0.00	0.00	0.00	0.00	0.00	0.00
26	ER4a	ExonRegion	0	221.06	219.33	228.06	152.18	358.20	483.75	323.01	189.70	145.33	177.74	124.03	218.84	175.31	179.19	176.98	221.01	137.97	124.14	126.35	146.67	159.08	157.21	95.55
27	E4a_E5a	KnownJunction	1	375.84	372.43	267.29	159.35	295.93	342.53	286.40	258.64	155.73	215.73	143.77	200.02	69.96	122.67	164.29	140.31	106.87	95.38	140.24	137.68	149.56	128.35	72.56
28	I4	Intron	1	1.99	1.30	1.49	1.10	2.95	0.47	3.80	1.23	1.20	0.90	4.66	47.43	102.45	7.97	9.95	5.69	21.17	0.24	0.66	0.65	0.14	0.13	0.42
29	I4_SR1	SilentIntronRegion	1	1.99	1.30	1.49	1.10	2.95	0.47	3.81	1.23	1.21	0.90	4.66	47.50	102.61	7.98	9.97	5.70	21.21	0.24	0.66	0.65	0.14	0.13	0.42
30	E5_Aa	NovelBoundary	1	18.08	3.09	4.52	4.03	8.23	0.00	11.04	0.00	4.34	4.35	4.42	45.31	53.73	2.47	18.91	4.36	62.18	0.00	0.00	3.26	5.75	0.00	0.00
31	ER5a	ExonRegion	0	305.33	218.09	213.99	143.93	322.56	166.31	171.66	236.18	161.21	194.48	156.20	320.93	192.97	195.07	195.74	157.52	186.43	87.94	107.36	152.65	166.43	177.89	63.55
32	E5_Da	NovelBoundary	1	23.71	9.60	8.96	1.43	11.29	0.00	2.25	6.37	5.79	5.86	17.90	101.58	115.90	15.07	27.94	15.55	42.26	0.00	0.00	0.00	3.15	0.00	3.50
33	E5a_E6a	KnownJunction	0	233.67	138.79	266.93	197.41	370.37	256.95	209.68	306.08	162.79	243.72	151.51	234.83	108.11	317.03	202.49	223.53	101.64	83.69	92.52	136.65	121.58	243.46	49.85
34	I5	Intron	1	2.77	1.44	0.93	1.07	2.99	0.80	3.98	1.49	1.20	1.11	8.19	56.53	100.63	8.13	15.80	9.70	36.33	0.19	0.37	0.81	0.40	0.44	0.50
35	I5_SR1	SilentIntronRegion	1	2.77	1.44	0.93	1.07	2.99	0.80	3.98	1.49	1.20	1.11	8.19	56.54	100.65	8.13	15.80	9.70	36.33	0.19	0.37	0.81	0.40	0.44	0.50
36	E6_Aa	NovelBoundary	1	0.00	0.00	0.00	0.00	0.00	0.00	2.21	2.01	0.00	0.00	4.90	68.87	183.27	2.47	38.20	3.85	48.25	0.00	0.00	0.00	0.00	0.00	0.00
37	ER6a	ExonRegion	0	341.38	110.35	261.04	175.88	314.13	212.02	139.83	252.62	155.61	201.50	157.16	353.28	341.29	215.56	232.90	258.25	160.17	96.68	179.80	138.26	139.92	209.22	78.93
38	E6_Da	NovelBoundary	1	3.78	0.00	3.67	7.39	24.53	8.18	16.83	11.67	13.25	5.43	9.84	114.19	194.31	17.07	24.60	35.20	31.70	6.51	0.00	6.07	2.90	8.82	0.00
39	E6a_E7a	KnownJunction	0	195.29	52.29	260.34	170.51	193.97	121.07	104.84	222.42	173.52	177.48	107.66	301.75	139.28	160.46	356.76	212.85	123.42	85.89	179.11	129.24	153.70	176.47	106.62
40	I6	Intron	1	30.01	10.24	14.10	19.17	31.11	10.89	30.81	17.86	18.09	11.07	16.09	105.17	144.55	24.98	28.83	30.82	57.36	6.98	10.90	12.14	7.13	11.69	7.80
41	I6_AR1	ActiveIntronRegion	1	0.90	3.09	1.06	1.42	8.49	1.83	14.64	4.89	0.95	0.99	6.39	122.72	186.25	14.30	43.30	13.09	16.76	0.00	0.00	9.70	5.04	7.89	1.81
42	I6_SR1	SilentIntronRegion	0	7.64	6.54	5.70	5.72	10.10	4.80	20.75	11.33	13.29	6.07	18.87	134.33	166.33	28.19	38.73	30.81	50.06	4.95	6.92	13.45	6.30	9.93	6.94
43	I6_AR2	ActiveIntronRegion	1	6.57	4.53	4.94	11.28	16.35	6.38	29.00	2.97	11.07	10.02	8.13	145.70	162.18	20.85	15.52	18.92	25.94	2.30	5.03	9.78	2.20	13.37	4.48
44	I6_SR2	SilentIntronRegion	1	9.33	7.75	8.42	13.70	17.93	7.73	24.76	7.20	10.87	6.33	14.87	100.15	145.07	22.56	19.05	24.91	60.67	5.20	9.29	11.00	5.14	10.06	5.53
45	I6_AR3	ActiveIntronRegion	1	15.17	3.06	13.79	22.93	32.64	19.03	46.69	16.32	21.74	12.07	14.10	90.01	232.92	29.54	19.91	43.02	58.93	1.98	13.78	12.68	5.66	23.84	4.73
46	I6_SR3	SilentIntronRegion	1	8.18	5.65	2.08	2.58	17.03	7.97	17.15	1.82	1.87	0.90	6.44	38.74	78.42	17.30	18.00	18.53	33.51	2.49	6.76	6.08	3.41	4.51	2.27
47	I6_AR4	ActiveIntronRegion	1	12.59	3.80	8.38	16.57	27.29	12.78	31.51	12.70	25.03	15.40	22.02	92.56	113.83	25.95	25.27	41.43	88.10	13.13	20.58	12.30	13.85	10.98	17.97
48	I6_SR4	SilentIntronRegion	1	53.10	11.72	20.82	21.49	43.23	15.92	35.56	28.40	26.12	17.32	10.90	70.96	121.06	18.82	25.51	32.01	50.81	7.11	13.12	7.82	4.46	13.20	7.26
49	I6_AR6	ActiveIntronRegion	0	136.43	30.25	50.23	69.41	113.25	29.66	67.37	62.19	44.22	30.37	20.99	84.68	117.83	32.41	43.49	47.90	77.93	17.53	22.00	18.09	17.16	18.33	15.60
50	E7_Aa	NovelBoundary	1	145.43	12.63	46.89	56.07	89.73	32.65	61.92	43.17	33.56	32.91	17.16	84.18	171.09	6.95	45.99	41.10	56.01	7.67	18.26	25.69	11.74	14.27	3.41
51	ER7a	ExonRegion	1	217.98	100.99	170.95	129.45	219.71	124.36	123.37	153.31	109.50	103.28	58.85	236.49	207.62	104.81	140.17	122.56	99.82	34.13	78.59	69.27	74.31	144.25	38.87
52	IG49	Intergenic	0	0.75	0.18	0.19	0.41	0.54	0.40	0.59	0.25	0.65	0.21	12.20	95.12	174.49	9.81	26.17	32.43	114.20	0.06	0.12	0.37	0.51	0.17	0.37
53	IG49_AR4	ActiveIntergenicRegion	0	9.33	0.00	1.56	0.00	6.76	0.56	7.83	1.11	0.00	1.94	8.91	54.74	91.34	13.54	37.77	26.95	61.88	0.00	0.97	3.17	0.00	4.03	0.00
54	IG49_SR4	SilentIntergenicRegion	0	0.89	0.26	0.40	0.56	0.78	0.52	0.93	0.40	0.95	0.27	11.39	91.56	167.92	8.92	19.67	23.18	92.59	0.03	0.22	0.59	0.29	0.23	0.38
55	IG49_AR3	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.21	0.00	0.80	0.00	15.28	136.54	277.69	8.49	30.74	15.44	63.43	0.00	0.36	0.00	0.36	0.00	0.00
56	IG49_SR3	SilentIntergenicRegion	0	0.87	0.19	0.06	0.13	0.30	0.20	0.27	0.04	0.48	0.05	14.78	110.22	187.83	9.73	32.97	40.03	115.73	0.22	0.00	0.17	0.67	0.13	0.09
57	IG49_SR2	SilentIntergenicRegion	0	0.98	0.19	0.06	0.72	0.30	0.99	0.44	0.29	0.57	0.14	12.17	106.34	193.65	11.17	25.85	36.15	111.54	0.00	0.05	0.27	0.58	0.07	0.28
58	IG49_AR1	ActiveIntergenicRegion	0	0.25	0.36	0.43	1.29	2.07	0.44	0.67	0.00	1.81	0.41	12.47	33.12	65.82	12.79	18.21	38.82	120.10	0.60	0.19	0.25	1.10	0.00	0.35
59	IG49_SR1	SilentIntergenicRegion	0	0.52	0.08	0.05	0.18	0.31	0.16	0.36	0.18	0.32	0.20	12.12	94.68	177.44	10.09	31.21	38.30	137.90	0.01	0.06	0.24	0.61	0.16	0.50