Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GNPTAB Gene 0 73.05 99.78 47.19 70.74 102.78 208.62 110.59 106.50 105.94 92.81 63.89 166.88 210.83 155.80 121.84 139.60 104.53 54.09 18.24 72.20 109.55 103.15 79.03 2 299314 Transcript 0 44.91 68.47 31.53 56.65 85.33 204.39 104.93 88.54 105.35 85.81 66.16 184.37 255.03 177.93 108.27 148.79 111.75 58.08 19.92 72.23 126.72 106.69 86.62 3 392919 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.86 0.00 1.19 0.33 0.72 1.25 2.68 3.89 0.00 0.14 0.00 0.00 0.00 0.64 0.00 4 ER1a ExonRegion 0 1.60 0.00 0.00 0.00 0.00 8.08 0.47 0.00 1.03 0.00 3.03 0.00 0.00 5.14 2.35 1.04 2.85 0.00 0.00 1.09 9.17 0.00 4.92 5 E1_Ab KnownBoundary 0 3.78 0.00 0.00 0.00 3.99 22.26 3.80 0.00 1.56 0.00 5.00 0.00 0.00 7.06 4.45 3.67 8.32 2.57 0.00 6.20 23.48 0.00 8.28 6 ER1b ExonRegion 0 2.93 3.75 3.43 4.81 1.95 22.83 8.55 8.12 14.43 15.09 11.90 13.19 21.20 29.94 24.15 27.07 23.90 11.49 0.55 18.15 43.68 13.95 13.03 7 E1a_E2a KnownJunction 0 3.78 5.85 5.23 15.85 12.48 45.66 14.75 26.57 39.06 37.93 21.64 42.16 25.32 71.52 46.73 55.03 28.99 16.71 3.76 38.99 62.95 18.31 15.19 8 ER2a ExonRegion 0 7.33 15.96 5.60 19.90 14.28 76.57 31.19 37.38 53.15 49.46 48.03 43.14 81.75 98.28 60.56 102.40 86.67 45.72 16.41 56.04 136.63 53.83 51.60 9 E2a_E4a KnownJunction 1 10.52 29.21 10.97 19.41 6.79 29.30 41.03 57.46 74.42 61.49 49.28 43.81 158.43 94.65 51.18 161.92 83.68 98.37 45.27 76.19 201.27 92.65 124.46 10 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.86 0.00 1.19 0.33 0.72 1.25 2.68 3.89 0.00 0.14 0.00 0.00 0.00 0.64 0.00 11 E4_Aa NovelBoundary 1 13.93 0.00 8.25 8.69 12.65 2.90 12.76 2.51 15.34 11.77 0.00 93.03 27.11 9.12 19.53 27.94 8.60 12.73 0.00 8.37 5.50 0.00 3.84 12 ER4a ExonRegion 0 9.86 25.13 13.08 30.80 20.22 54.78 34.19 54.00 78.83 56.32 63.21 75.80 119.36 137.67 71.52 154.58 125.63 84.30 21.82 71.68 137.03 89.92 93.63 13 E4a_E5a KnownJunction 0 3.78 37.82 7.78 31.10 7.72 100.79 38.77 42.47 57.64 60.49 76.97 91.53 84.41 209.49 87.89 125.10 119.21 53.27 18.73 38.86 202.75 98.28 64.45 14 ER5a ExonRegion 0 5.54 37.72 7.09 41.67 12.17 93.26 41.52 34.98 78.05 60.65 55.27 90.30 88.78 181.48 72.60 112.66 93.29 57.28 12.74 54.61 173.88 92.77 70.27 15 E5a_E6a KnownJunction 0 10.00 51.04 7.95 46.25 26.66 102.21 56.70 37.34 84.06 52.03 64.60 112.69 107.14 149.39 78.13 86.13 86.02 66.86 9.32 71.08 153.89 107.22 90.06 16 ER6a ExonRegion 0 20.35 62.45 15.33 38.58 41.66 132.58 77.32 47.52 89.54 76.66 67.27 150.02 187.31 162.43 73.29 154.49 129.98 83.74 25.75 83.76 175.47 114.06 105.63 17 E6a_E7a KnownJunction 1 24.89 52.75 9.73 40.45 58.23 184.38 85.15 46.09 87.73 85.26 54.22 90.33 203.07 158.10 56.99 156.54 85.83 68.77 4.80 85.97 105.58 128.96 103.63 18 ER7a ExonRegion 0 15.53 44.58 14.42 35.67 56.03 148.11 64.91 35.71 72.34 65.78 59.68 162.65 236.09 129.70 58.83 124.97 88.41 47.30 11.42 54.89 82.69 91.23 57.06 19 E7a_E8a KnownJunction 0 45.64 53.94 29.18 30.30 56.88 120.56 82.05 43.09 76.76 72.31 44.59 220.42 232.29 109.78 63.66 146.71 101.45 42.16 31.44 69.67 83.46 143.78 48.49 20 ER8a ExonRegion 0 20.90 83.50 22.75 27.56 39.58 121.78 73.43 55.23 92.99 83.09 68.78 182.16 228.70 134.04 65.93 127.12 101.20 32.97 30.74 79.27 93.49 99.95 64.71 21 E8a_E9a KnownJunction 0 16.30 85.38 29.69 28.90 73.43 147.42 119.99 76.15 97.80 90.42 92.50 196.11 273.20 107.95 55.01 136.97 93.60 43.98 13.55 78.30 91.43 89.95 39.52 22 I8_AR3 ActiveIntronRegion 0 8.19 3.54 2.40 5.04 26.76 1.67 12.32 8.34 12.78 5.63 0.00 9.41 27.94 10.31 11.98 37.86 14.78 1.85 0.00 9.90 2.20 14.68 12.77 23 I8_SR2 SilentIntronRegion 0 7.44 4.15 2.92 4.59 11.20 5.08 11.34 5.36 5.70 2.50 2.19 9.30 19.17 12.02 25.72 17.95 8.17 4.80 1.67 6.58 5.18 5.38 6.43 24 I8_AR4 ActiveIntronRegion 0 6.78 5.14 3.10 8.15 7.59 5.08 12.25 3.69 7.05 5.74 2.77 8.08 11.54 12.17 24.88 24.97 10.82 5.87 1.23 5.26 8.27 6.84 7.85 25 I8_SR3 SilentIntronRegion 1 6.68 6.19 1.89 5.01 5.63 4.64 13.42 1.86 3.39 2.68 2.63 3.74 2.69 10.11 33.54 21.59 10.38 3.46 2.94 5.10 5.21 4.20 4.58 26 I8_AR5 ActiveIntronRegion 1 8.03 7.02 6.18 2.58 3.48 1.28 5.40 2.25 0.49 0.36 2.65 0.24 0.00 7.45 18.64 30.21 4.52 2.86 0.00 3.32 4.32 4.82 1.97 27 ER9a ExonRegion 0 20.89 75.54 27.31 42.12 70.31 186.12 97.11 71.04 90.16 73.68 73.81 213.19 239.65 161.20 88.72 178.33 106.12 55.73 24.91 78.84 118.22 113.18 80.50 28 E9_Da NovelBoundary 0 48.16 9.01 1.18 5.06 14.69 5.79 27.73 1.93 4.05 0.00 2.47 18.91 0.00 4.24 4.45 15.98 8.42 0.00 0.00 8.69 0.00 0.00 7.68 29 E9a_E10a KnownJunction 0 20.00 40.98 25.81 29.37 44.40 109.14 51.98 80.38 77.11 64.66 44.38 203.32 261.18 183.59 106.43 230.11 95.65 60.94 52.33 59.25 139.12 87.93 95.44 30 ER10a ExonRegion 0 26.90 49.98 24.26 49.87 56.38 149.97 74.61 71.65 86.20 61.53 60.51 200.36 226.14 190.58 97.69 178.91 121.34 72.82 19.98 80.14 168.56 84.76 89.22 31 E10a_E11a KnownJunction 0 58.68 57.42 26.58 47.48 80.48 240.94 72.16 71.30 87.90 70.16 72.39 313.15 164.44 224.56 150.94 208.07 135.76 85.35 45.18 64.11 177.05 102.08 107.73 32 ER11a ExonRegion 0 21.26 53.19 18.54 38.54 53.34 154.52 75.55 62.37 83.97 57.63 59.54 157.05 133.65 199.49 94.64 147.72 106.28 74.64 22.11 78.61 144.21 72.47 88.92 33 E11a_E12a KnownJunction 0 13.11 39.66 24.69 34.99 49.24 155.14 46.19 54.67 65.91 69.30 42.33 106.68 103.08 161.11 100.38 144.41 72.18 67.94 23.34 68.26 137.21 72.62 66.50 34 ER12a ExonRegion 0 23.86 42.31 13.55 25.77 49.13 170.19 66.65 53.28 77.90 59.65 54.79 77.76 102.69 174.59 73.94 128.59 85.29 71.21 14.64 66.75 150.83 62.24 85.94 35 E12a_E13a KnownJunction 0 6.89 8.95 28.71 17.61 52.63 184.44 91.95 59.80 77.57 57.32 46.38 98.58 94.64 221.62 166.39 128.94 98.55 53.97 21.18 79.07 140.79 61.91 99.96 36 ER13a ExonRegion 0 27.01 34.14 20.83 34.63 52.87 165.76 68.72 56.86 72.45 83.27 52.25 72.29 116.47 164.21 71.08 148.59 100.01 79.60 10.06 81.19 165.76 76.35 79.65 37 E13a_E14a KnownJunction 0 29.63 58.67 18.36 25.47 49.75 180.01 58.29 49.86 75.49 82.63 63.07 54.62 154.05 123.61 50.68 166.54 82.56 65.83 12.52 56.82 180.58 115.61 103.89 38 ER14a ExonRegion 0 37.96 77.87 30.74 46.96 75.07 203.19 90.26 84.27 104.65 94.26 74.04 225.09 241.32 181.50 80.52 158.14 121.99 53.26 16.70 75.39 127.79 104.83 85.71 39 E14a_E15a KnownJunction 0 66.60 84.13 55.35 68.46 85.06 172.85 103.65 125.52 167.74 113.01 110.13 379.62 417.83 263.41 109.03 198.07 114.17 33.62 22.97 84.43 89.95 170.41 125.06 40 ER15a ExonRegion 0 60.99 77.60 44.52 66.08 88.47 258.16 116.34 129.50 151.15 119.78 102.88 288.17 329.03 223.64 105.63 174.54 165.70 48.41 8.90 81.81 139.25 133.16 90.24 41 E15a_E16a KnownJunction 0 42.38 94.19 48.64 66.39 113.75 372.40 163.23 130.99 125.69 122.38 65.38 288.99 425.30 244.04 112.86 256.43 172.32 45.47 3.58 76.64 133.69 123.26 76.91 42 ER16a ExonRegion 0 48.37 59.43 47.75 78.63 101.18 272.99 127.89 135.32 146.07 109.52 77.07 258.55 391.53 217.93 118.69 176.61 153.37 66.79 13.58 75.56 168.73 118.93 100.25 43 E16_Da NovelBoundary 0 33.04 9.47 0.00 5.19 4.16 0.00 9.98 11.91 4.98 1.58 0.00 0.00 0.00 0.00 5.56 0.00 0.00 0.00 0.00 2.68 0.00 3.00 0.00 44 E16a_E17a KnownJunction 0 47.71 78.67 49.02 89.60 100.42 213.85 158.41 124.45 142.62 128.19 61.65 165.50 365.89 177.23 200.51 100.32 120.06 69.81 13.65 78.62 161.92 79.48 106.96 45 I16_AR1 ActiveIntronRegion 0 23.02 10.94 1.61 8.40 12.01 0.00 8.41 1.54 0.05 2.46 0.00 2.02 5.21 0.83 1.10 1.78 0.00 0.00 0.42 0.35 0.00 2.36 1.66 46 E17_Aa NovelBoundary 0 20.60 8.88 3.02 22.81 15.11 4.49 17.31 0.00 1.79 4.89 0.00 18.76 19.64 0.00 0.00 8.37 0.00 0.00 0.00 2.56 2.66 2.69 0.00 47 ER17a ExonRegion 0 84.75 101.43 40.72 95.71 148.34 320.95 167.85 137.29 162.79 135.67 90.74 248.53 436.38 215.57 132.47 174.31 155.81 60.17 17.66 64.56 159.65 143.62 104.79 48 E17a_E18a KnownJunction 0 39.12 43.48 36.60 107.85 148.30 357.75 130.99 129.18 132.38 94.45 52.28 202.57 335.21 195.72 79.61 128.77 94.72 51.53 0.00 75.42 112.81 82.24 92.02 49 I17 Intron 0 14.99 10.61 3.69 16.94 13.86 8.03 11.25 9.61 5.12 7.42 1.40 3.29 11.17 2.54 5.35 6.68 2.77 2.84 3.15 5.19 1.68 3.97 3.80 50 I17_AR3 ActiveIntronRegion 0 29.69 16.89 6.40 33.01 24.97 16.84 18.47 20.78 10.89 13.18 2.28 4.66 23.84 5.65 6.71 11.10 2.22 3.90 3.37 9.04 0.76 5.58 3.59 51 I17_SR3 SilentIntronRegion 0 12.11 17.26 3.90 23.69 20.70 21.45 12.54 15.49 5.95 11.68 1.30 3.47 10.86 2.39 5.92 1.60 2.22 1.14 3.65 8.20 1.39 5.57 3.44 52 E18_Aa NovelBoundary 0 29.12 19.54 7.07 34.73 8.40 12.66 15.68 20.50 8.54 24.74 2.58 0.00 26.62 0.00 4.45 0.00 3.46 0.00 0.00 5.62 3.15 2.51 7.68 53 ER18a ExonRegion 0 76.44 78.67 45.54 81.12 144.68 326.82 184.00 132.23 139.94 107.70 83.38 169.30 401.92 175.22 130.76 133.88 107.20 66.15 15.37 75.04 72.52 121.72 97.18 54 E18_Da NovelBoundary 0 20.74 26.25 3.67 28.04 0.00 5.00 4.02 22.84 1.79 16.17 2.58 6.30 26.62 4.71 9.64 0.00 0.00 2.11 0.00 9.08 0.00 8.94 0.00 55 E18a_E19a KnownJunction 0 87.57 66.76 58.51 67.16 154.24 345.48 208.40 161.26 128.30 118.70 88.02 200.77 362.48 218.73 173.93 149.62 155.31 53.89 39.15 59.51 91.37 192.21 108.41 56 E19_Aa NovelBoundary 0 9.41 12.70 5.09 29.93 20.29 15.10 11.92 26.25 6.28 17.89 0.00 5.55 19.97 2.35 0.00 0.00 0.00 1.78 0.00 3.26 0.00 5.51 0.00 57 ER19a ExonRegion 0 91.52 85.27 51.40 85.21 123.71 267.70 156.31 144.96 145.54 124.51 81.49 255.53 429.07 229.46 157.61 140.98 140.10 50.52 28.25 74.92 99.50 123.05 87.27 58 E19_Da NovelBoundary 0 46.75 35.19 11.68 16.51 40.49 19.59 49.77 10.39 14.53 11.66 2.21 6.30 20.29 10.42 5.93 21.45 9.16 4.35 4.80 8.95 5.87 17.15 8.71 59 E19a_E20a KnownJunction 0 109.43 81.63 37.25 63.20 116.30 216.07 130.50 132.71 129.37 102.99 74.86 298.00 371.89 234.09 166.27 150.82 109.12 35.19 28.24 71.78 84.45 124.61 91.51 60 I19 Intron 0 19.12 21.47 4.35 22.15 23.11 23.10 24.50 14.44 8.27 11.84 5.10 18.03 22.64 10.33 9.27 18.79 5.81 5.94 3.17 8.67 4.64 9.89 6.94 61 I19_AR1 ActiveIntronRegion 0 11.98 17.15 5.77 17.09 16.56 8.82 15.45 12.49 7.46 15.78 3.35 8.93 13.38 9.34 8.63 21.04 9.00 8.16 2.73 7.80 7.27 3.59 7.06 62 I19_SR1 SilentIntronRegion 0 26.06 29.56 5.14 29.85 20.24 19.48 25.16 20.73 14.24 17.15 7.31 10.47 19.58 7.11 6.07 22.79 6.53 7.61 2.66 9.79 4.44 13.21 11.02 63 I19_AR2 ActiveIntronRegion 0 15.60 19.14 1.92 14.55 20.66 20.59 21.30 13.03 7.22 13.97 1.60 22.16 16.79 12.43 7.75 16.86 4.32 2.46 0.83 4.52 2.31 14.21 6.20 64 I19_SR2 SilentIntronRegion 0 17.80 21.77 4.77 21.80 25.89 27.57 26.48 12.58 6.65 10.22 6.24 23.21 26.94 11.64 10.44 18.42 6.12 6.20 3.64 8.90 5.34 9.71 6.70 65 I19_AR3 ActiveIntronRegion 0 23.28 16.39 2.55 23.30 23.63 24.73 26.06 15.98 8.27 7.15 2.40 13.82 22.45 9.16 10.37 15.20 2.57 3.71 3.94 9.89 2.05 9.04 3.64 66 E20_Aa NovelBoundary 0 42.67 11.91 4.08 27.80 48.64 78.25 60.41 20.25 10.45 15.42 4.42 19.21 0.00 12.01 24.11 3.59 18.42 4.93 0.00 5.37 0.00 13.29 12.21 67 ER20a ExonRegion 0 92.43 119.73 51.36 116.83 149.73 270.77 156.34 137.60 145.18 114.66 69.78 240.57 342.62 219.78 160.50 148.23 133.45 46.29 31.10 98.90 126.54 144.18 82.03 68 E20_Da NovelBoundary 0 3.56 2.89 4.20 21.74 14.43 12.78 21.02 11.38 3.27 7.60 2.68 11.85 13.15 2.71 5.93 0.00 7.57 4.27 4.80 0.00 0.00 0.00 0.00 69 E20a_E21a KnownJunction 1 113.35 158.33 54.85 124.79 223.51 469.45 270.76 166.31 194.82 106.16 75.33 322.76 514.74 248.51 204.09 162.09 183.92 64.87 7.72 93.32 147.09 134.53 97.66 70 ER21a ExonRegion 0 70.91 117.48 48.10 103.25 226.67 336.71 184.67 125.19 146.48 108.94 71.03 270.38 392.16 187.15 174.04 154.45 126.92 60.10 20.51 90.02 76.89 135.38 95.36 71 E21a_E22a KnownJunction 1 95.20 141.62 42.43 113.61 199.32 364.90 167.46 129.14 139.52 87.54 74.76 328.46 505.49 198.07 181.59 118.43 106.22 42.66 17.04 90.00 48.62 115.98 96.89 72 I21 Intron 0 20.65 21.40 9.12 25.06 19.28 14.10 23.21 9.79 8.25 16.19 3.13 12.02 17.27 10.31 8.38 18.63 4.96 7.25 4.16 14.85 6.50 9.75 9.41 73 I21_AR1 ActiveIntronRegion 0 24.71 27.09 10.45 27.29 23.90 14.15 23.42 9.18 7.24 16.61 2.35 10.92 11.96 9.46 7.25 20.52 5.61 8.54 4.17 15.20 9.79 7.51 9.51 74 I21_SR2 SilentIntronRegion 0 20.00 16.69 9.03 23.44 17.14 17.40 26.49 11.54 8.94 17.77 4.38 12.40 20.37 12.57 10.49 19.70 4.77 7.68 4.61 15.52 5.00 11.83 9.64 75 I21_AR2 ActiveIntronRegion 0 16.55 21.44 10.84 37.28 21.62 11.05 19.30 11.54 13.28 19.32 4.56 20.76 37.48 12.40 11.63 18.20 5.92 4.55 5.72 18.90 3.01 12.61 15.97 76 E22_Aa NovelBoundary 0 16.97 18.62 10.08 26.47 12.99 18.57 25.61 24.56 10.71 25.79 2.05 13.20 46.59 11.60 9.89 17.77 8.13 1.91 3.76 20.01 0.00 9.12 7.94 77 ER22a ExonRegion 0 153.76 179.59 90.28 117.88 171.31 261.54 156.51 165.71 120.50 113.67 58.44 134.97 168.73 124.72 196.28 128.65 83.14 49.51 20.71 72.71 68.90 115.54 75.22 78 IG42_AR1 ActiveIntergenicRegion 0 18.74 19.45 9.92 26.38 22.76 16.24 31.10 13.68 7.39 21.39 1.83 23.06 33.99 15.67 11.46 14.73 5.46 3.80 4.14 21.10 1.82 11.56 6.93