Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MDM1 Gene 0 40.25 31.02 15.05 26.78 45.69 54.08 46.89 27.84 24.80 38.88 55.44 70.98 36.52 61.48 25.32 53.65 35.61 16.43 9.45 16.36 14.20 24.70 18.59 2 430606 Transcript 0 6.45 9.39 4.07 11.25 14.02 19.37 25.27 9.18 13.71 12.49 14.38 31.10 16.47 15.86 5.19 8.26 9.71 5.23 2.28 9.56 4.87 13.42 7.42 3 411698 Transcript 0 10.21 7.61 4.78 10.00 27.25 25.43 10.39 9.07 4.78 11.17 63.98 68.52 39.93 70.00 29.19 55.62 23.62 5.39 1.73 7.57 5.84 11.54 12.24 4 303145 Transcript 0 10.13 22.58 6.11 15.11 26.60 35.24 32.50 22.88 10.97 27.15 46.45 80.18 29.27 51.86 11.95 51.35 17.48 9.80 5.62 11.89 3.93 15.19 10.76 5 393543 Transcript 0 0.00 1.36 0.00 1.28 3.41 0.00 2.23 0.99 0.79 0.00 3.52 1.18 0.00 3.68 3.24 12.04 6.29 1.65 0.00 2.00 0.00 1.88 3.70 6 ER1a ExonRegion 0 0.87 0.00 0.00 0.00 0.00 1.75 0.78 0.00 0.00 0.00 2.55 0.00 0.00 5.24 0.00 0.81 2.70 1.60 0.00 0.00 0.00 0.00 2.54 7 ER1b ExonRegion 0 6.62 9.98 1.12 3.35 23.41 68.93 34.10 1.95 5.57 5.47 28.00 0.95 4.33 40.27 9.69 45.53 17.10 19.14 6.83 8.54 13.26 4.01 22.29 8 E1a_E2a KnownJunction 0 6.89 19.27 3.61 3.80 15.11 51.16 16.83 9.08 11.92 20.63 44.38 6.30 13.47 10.12 0.00 40.93 29.92 29.72 4.24 16.81 16.25 5.27 37.65 9 ER2a ExonRegion 1 5.01 8.03 5.40 7.48 2.98 17.62 10.88 4.81 10.44 15.43 54.93 24.51 7.75 55.94 8.80 34.42 47.59 25.64 11.88 15.87 22.23 7.74 15.17 10 E2a_E3a KnownJunction 0 0.00 0.00 0.00 2.03 0.00 0.00 3.97 1.73 1.33 0.00 2.47 0.00 0.00 4.53 4.45 16.24 8.51 1.74 0.00 3.00 0.00 2.76 4.35 11 E2a_E4a KnownJunction 0 3.78 5.53 3.25 14.65 0.00 2.84 0.00 4.56 20.31 25.20 75.12 18.31 20.29 75.11 34.86 92.45 78.82 24.42 15.72 22.31 31.69 5.94 29.71 12 ER3a ExonRegion 0 0.00 2.72 0.00 0.53 6.81 0.00 0.48 0.25 0.24 0.00 4.57 2.36 0.00 2.83 2.03 7.84 4.07 1.56 0.00 0.99 0.00 1.00 3.05 13 E4_Aa NovelBoundary 0 0.00 0.00 1.48 3.36 11.63 13.00 1.81 0.00 1.16 8.73 19.27 0.00 0.00 7.36 0.00 0.00 0.00 1.78 0.00 0.00 0.00 2.82 4.01 14 ER4a ExonRegion 1 12.50 22.09 10.31 17.98 35.07 56.44 46.74 15.87 19.78 41.12 92.52 95.05 35.04 92.71 15.14 94.86 70.12 30.06 16.20 23.70 20.47 27.02 32.24 15 E4_Da KnownBoundary 0 0.00 3.35 1.39 6.13 12.31 14.31 28.04 6.08 13.19 13.81 28.17 38.26 18.67 22.13 0.00 31.10 11.78 8.54 4.61 9.08 2.78 21.68 14.08 16 E4a_E4b KnownJunction 0 16.52 5.79 5.85 13.78 20.97 17.94 25.75 24.36 10.68 30.89 84.97 81.03 25.65 57.51 26.95 63.57 19.64 8.21 8.38 16.55 3.15 16.23 12.29 17 E4a_E5a KnownJunction 0 0.00 3.35 4.55 5.76 16.98 0.00 11.26 1.77 6.39 3.14 7.11 26.56 0.00 9.77 4.45 8.12 0.00 4.39 0.00 6.46 0.00 2.94 8.71 18 ER4b ExonRegion 0 7.71 8.45 2.87 11.21 16.74 21.61 31.06 9.33 13.24 12.62 18.03 34.48 13.22 19.11 3.99 12.98 13.47 8.47 3.06 9.51 8.18 10.84 11.60 19 E4_Ab KnownBoundary 0 17.26 22.04 4.73 26.10 11.97 18.17 37.67 4.85 8.71 13.81 14.11 31.36 33.76 13.54 11.37 13.07 21.97 3.98 0.00 13.87 2.41 33.13 7.09 20 ER4c ExonRegion 0 17.53 38.03 11.45 31.45 40.50 53.91 49.40 24.97 27.61 44.18 77.09 163.32 67.69 69.00 15.59 57.93 47.84 8.07 6.13 17.45 12.61 33.32 16.06 21 E4_Db KnownBoundary 1 21.19 13.42 8.69 17.35 11.80 42.25 13.25 5.05 17.74 18.05 20.16 56.12 0.00 4.94 0.00 0.00 12.34 1.74 4.42 5.75 0.00 9.06 4.27 22 E4b_E5a KnownJunction 1 6.74 28.09 1.12 16.91 23.09 67.01 31.62 14.42 16.03 30.52 42.17 152.00 55.35 80.76 8.90 86.99 28.42 10.78 3.67 15.85 8.65 24.13 19.97 23 ER4d ExonRegion 0 5.19 10.33 5.26 11.29 11.30 17.14 19.47 9.04 14.18 12.36 10.74 27.73 19.72 12.62 6.38 3.54 5.96 2.00 1.50 9.61 1.55 16.01 3.23 24 E4_Dc NovelBoundary 0 7.41 5.53 1.57 12.29 7.22 28.85 23.89 4.44 10.27 12.97 2.68 25.06 6.82 7.12 0.00 7.18 0.00 2.36 0.00 14.19 0.00 5.76 0.00 25 I4 Intron 0 4.11 7.85 2.33 5.72 8.31 9.95 15.48 6.13 8.65 9.22 7.85 23.94 16.44 7.02 2.28 4.91 5.84 1.28 2.22 6.85 1.21 7.56 4.86 26 I4_SR1 SilentIntronRegion 0 2.98 9.62 2.64 5.59 6.99 10.03 17.98 5.47 9.40 10.52 7.95 19.75 18.72 7.49 1.72 5.14 6.78 1.43 2.05 6.47 1.07 6.78 5.04 27 I4_AR1 ActiveIntronRegion 0 5.13 7.36 1.46 4.65 10.63 11.77 16.08 6.97 9.61 8.50 9.53 28.56 10.72 6.91 2.74 5.97 7.04 1.75 1.61 6.97 1.48 7.78 7.91 28 I4_SR2 SilentIntronRegion 0 1.54 3.87 2.98 8.03 13.38 10.00 18.80 6.71 9.48 6.13 2.51 13.76 17.98 7.70 2.76 5.77 2.16 2.07 1.55 14.21 1.89 8.88 0.70 29 I4_AR2 ActiveIntronRegion 0 5.63 6.00 2.50 6.53 7.55 8.17 10.06 6.41 6.35 8.27 7.13 28.96 17.61 6.23 2.74 3.42 3.81 0.46 3.21 6.10 1.11 8.49 2.50 30 E5_Aa NovelBoundary 1 10.52 12.50 1.63 7.46 16.13 7.27 25.84 6.82 7.41 9.54 7.42 62.72 33.93 2.47 0.00 0.00 0.00 2.53 4.71 2.62 5.56 8.76 4.35 31 ER5a ExonRegion 0 19.93 53.71 10.20 24.99 51.65 50.15 54.87 18.15 25.50 46.61 70.49 161.22 73.17 85.87 16.18 61.51 30.91 9.81 7.26 17.08 8.62 20.95 16.52 32 E5a_E6a KnownJunction 1 19.34 48.35 12.21 22.57 61.38 82.74 57.10 29.00 18.06 61.25 51.91 150.80 81.33 121.14 9.39 66.05 41.23 16.00 13.84 23.52 7.91 19.41 7.77 33 ER6a ExonRegion 1 26.78 48.59 17.57 22.91 61.16 50.06 55.02 28.34 18.50 51.89 86.07 158.32 114.09 119.19 21.31 77.76 45.45 18.41 12.86 25.70 6.67 21.60 20.70 34 E6a_E7a KnownJunction 1 40.75 60.71 13.54 26.77 52.12 42.31 61.17 30.23 18.66 56.22 105.61 203.47 92.20 119.78 19.78 76.05 47.22 12.44 8.56 14.25 13.65 23.09 54.97 35 E7_Aa NovelBoundary 0 3.33 5.92 0.00 3.63 16.30 0.00 15.10 2.55 1.53 3.65 10.32 23.11 33.76 11.95 0.00 11.11 7.95 0.00 0.00 11.57 0.00 5.39 0.00 36 ER7a ExonRegion 0 18.65 40.57 13.58 18.15 42.79 59.58 45.46 36.04 18.48 47.68 106.50 155.82 71.66 102.11 26.00 73.86 66.05 13.78 6.37 15.94 11.94 23.44 25.61 37 E7_Da NovelBoundary 0 3.48 0.00 0.00 1.76 7.47 0.00 13.07 2.55 11.92 13.89 36.11 37.06 40.09 17.72 9.64 35.55 9.26 2.24 0.00 15.60 5.81 20.39 0.00 38 E7a_E8a KnownJunction 0 17.41 9.54 7.01 5.29 20.88 33.73 19.21 6.61 4.31 9.86 91.92 94.68 33.76 96.24 39.56 66.31 23.09 4.77 0.00 9.52 8.03 25.66 13.06 39 E7a_E9a KnownJunction 0 7.11 33.88 11.35 14.62 35.74 20.78 40.14 29.86 6.19 20.04 12.21 7.50 6.82 17.31 0.00 3.50 4.39 10.40 4.80 3.26 0.00 5.20 0.00 40 I7 Intron 0 7.15 4.74 1.36 4.28 10.23 14.60 12.77 4.38 7.83 9.17 18.60 28.41 24.48 20.67 2.58 17.12 12.40 4.37 1.83 8.08 5.66 10.15 6.58 41 I7_AR1 ActiveIntronRegion 0 1.48 1.60 0.00 1.48 8.23 14.76 8.23 1.96 8.46 5.13 13.23 38.23 38.34 13.70 0.57 14.24 11.26 1.53 0.00 9.96 2.52 9.06 2.26 42 I7_SR1 SilentIntronRegion 1 1.37 2.41 0.06 3.12 7.06 14.10 9.12 2.82 5.57 7.31 22.85 28.14 31.56 26.76 2.34 21.19 17.96 5.51 1.48 11.81 8.01 6.28 7.13 43 I7_AR2 ActiveIntronRegion 1 3.25 2.59 1.37 2.29 4.94 12.18 9.86 1.46 6.63 5.25 23.58 15.41 9.47 30.35 1.81 24.98 12.87 8.37 3.25 9.95 14.32 4.80 10.26 44 I7_SR2 SilentIntronRegion 0 5.72 2.92 0.88 3.63 9.93 13.24 15.80 3.78 7.78 11.79 16.00 32.87 31.27 21.29 2.20 10.57 8.60 2.35 0.50 5.14 2.44 13.07 5.76 45 I7_AR3 ActiveIntronRegion 0 12.37 7.79 2.43 6.18 13.38 16.04 14.46 6.56 8.92 10.47 18.19 27.31 18.88 17.14 3.49 17.49 12.22 4.57 2.71 7.18 4.91 11.79 6.83 46 E8a_E9a KnownJunction 0 13.11 9.01 1.71 16.71 39.47 35.77 2.16 14.09 4.43 15.47 67.23 68.12 74.67 79.29 37.95 80.58 34.97 6.67 4.80 7.86 6.30 3.12 12.04 47 ER8a ExonRegion 0 10.30 8.54 5.84 12.22 31.66 32.21 8.91 13.83 3.99 16.21 89.69 84.71 51.28 94.69 34.82 67.47 36.42 5.73 2.12 6.45 9.04 14.45 15.17 48 I8 Intron 0 37.30 9.83 4.56 10.77 27.53 33.75 25.19 12.45 14.64 11.73 25.03 25.21 26.33 18.40 10.82 21.80 15.44 4.45 2.98 10.95 4.47 13.32 8.70 49 I8_AR1 ActiveIntronRegion 0 37.53 9.89 4.58 10.84 27.70 33.96 25.34 12.53 14.73 11.80 25.18 25.36 26.47 18.51 10.88 21.92 15.54 4.47 3.00 11.01 4.50 13.41 8.75 50 E9_Aa NovelBoundary 1 49.49 17.89 12.30 20.31 41.00 44.63 44.21 20.82 24.94 20.82 51.86 20.26 13.15 39.03 25.71 44.35 4.49 5.89 0.00 16.87 5.75 13.78 11.61 51 ER9a ExonRegion 0 49.76 49.88 22.02 33.45 54.32 68.27 58.76 32.77 28.82 47.80 112.04 115.91 71.58 124.30 43.95 106.91 58.23 25.40 10.46 20.78 25.42 21.26 29.50 52 E9_Da NovelBoundary 0 3.56 3.35 1.51 9.99 4.33 7.15 15.77 8.42 4.83 5.88 11.90 7.65 0.00 9.71 0.00 4.36 0.00 4.27 0.00 5.56 8.22 0.00 11.44 53 E9a_E10a KnownJunction 0 74.24 27.56 23.92 32.33 62.82 94.15 48.49 21.48 28.41 53.56 80.18 83.13 60.55 119.37 34.12 81.69 40.30 36.56 7.44 8.44 10.69 16.72 24.93 54 I9 Intron 0 14.22 6.51 3.44 7.15 11.09 13.94 16.13 8.57 7.28 6.01 8.26 16.94 11.22 7.70 3.36 7.46 5.39 1.68 2.80 5.88 1.52 7.46 3.50 55 I9_SR1 SilentIntronRegion 0 14.26 6.53 3.45 7.16 11.12 13.98 16.17 8.60 7.30 6.02 8.28 16.98 11.25 7.72 3.36 7.48 5.40 1.68 2.81 5.89 1.52 7.48 3.51 56 E10_Aa NovelBoundary 0 25.78 5.26 19.60 15.78 7.81 18.34 19.03 8.26 4.25 6.88 14.58 20.26 5.68 4.83 8.90 10.94 4.77 0.00 16.00 11.57 8.03 9.31 0.00 57 ER10a ExonRegion 0 85.72 51.51 25.21 36.17 54.80 99.01 58.88 35.54 35.19 62.03 87.13 83.04 47.55 117.50 36.31 101.92 73.20 38.88 10.79 26.12 32.94 28.94 34.25 58 E10a_E11a KnownJunction 0 133.73 108.07 24.42 52.24 88.79 122.60 74.50 26.00 50.00 65.76 97.97 68.72 27.92 126.08 82.45 129.03 47.87 32.62 4.24 38.86 45.59 53.46 35.08 59 ER11a ExonRegion 1 76.16 71.75 25.57 43.10 80.64 100.86 64.75 38.47 37.90 66.75 108.84 62.19 24.64 109.73 39.19 97.38 77.27 39.68 10.14 25.13 26.12 39.08 35.00 60 E11a_E12a KnownJunction 1 65.57 66.17 24.16 55.10 78.78 66.78 56.09 38.40 34.95 67.10 64.81 121.54 19.32 84.05 47.84 78.70 75.92 42.37 19.29 38.35 21.99 42.19 47.72 61 ER12a ExonRegion 0 100.88 60.47 24.72 66.91 63.61 93.64 76.45 49.48 43.53 76.00 116.31 77.46 47.63 106.25 62.06 190.95 71.33 42.16 27.86 31.35 27.69 75.93 46.29 62 E12a_E13a KnownJunction 0 122.91 66.11 38.20 88.43 103.99 110.28 79.36 80.59 59.00 95.95 133.30 104.58 45.61 120.25 60.70 139.71 93.50 48.46 30.12 51.96 11.37 100.18 44.73 63 ER13a ExonRegion 1 137.93 76.71 38.16 58.96 110.89 104.48 90.00 56.45 45.74 75.46 128.56 76.00 34.96 94.51 57.86 129.09 77.39 33.52 29.79 29.87 35.21 52.01 31.22 64 E13a_E14a KnownJunction 0 123.87 46.90 17.68 31.73 96.52 100.34 101.09 50.11 34.40 44.32 52.01 52.22 28.73 96.12 44.38 93.39 64.80 22.97 26.26 22.88 32.87 22.60 19.97 65 ER14a ExonRegion 0 114.36 71.07 26.33 37.14 95.75 110.21 95.37 41.08 29.62 58.17 103.02 69.05 28.45 89.00 38.83 113.24 72.12 26.67 9.29 17.27 31.22 30.94 26.23 66 E14a_E15a KnownJunction 0 108.46 79.46 41.28 48.08 137.95 98.41 114.96 39.06 28.30 68.23 92.66 66.47 48.21 84.82 52.66 91.17 61.71 26.53 9.60 17.51 31.82 34.05 43.54 67 E15_Aa NovelBoundary 0 29.71 8.35 5.68 1.66 37.27 19.25 19.25 8.50 4.83 5.35 7.95 21.61 0.00 5.18 6.18 0.00 0.00 3.94 0.00 2.43 0.00 0.00 0.00 68 ER15a ExonRegion 1 75.24 39.20 29.85 47.94 84.41 74.90 63.52 62.84 42.14 63.88 38.46 86.92 52.94 60.96 53.84 34.36 18.48 8.34 11.99 15.62 8.64 37.11 12.57