Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 OSBPL8 Gene 0 49.64 195.25 42.53 83.98 111.94 211.60 174.86 73.46 103.00 69.67 118.24 143.66 130.02 133.85 39.61 86.44 141.52 58.68 33.55 140.99 77.28 217.15 261.70 2 261183 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 393249 Transcript 1 0.00 9.60 1.42 6.86 0.00 11.36 6.23 0.00 1.65 1.05 40.91 5.85 40.42 58.04 0.00 39.56 42.92 29.72 9.51 11.38 90.01 80.52 225.44 4 446075 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 438913 Transcript 1 2.12 24.40 10.42 12.27 17.39 57.76 70.83 12.96 19.76 17.20 68.62 10.82 9.38 85.27 11.61 43.10 94.08 79.45 17.52 88.30 103.57 55.21 160.05 6 393250 Transcript 0 0.00 8.90 2.54 4.88 5.88 4.90 8.07 2.75 8.09 4.63 14.66 8.94 12.15 18.55 1.25 13.28 29.01 15.01 3.44 16.22 17.34 23.31 41.38 7 393248 Transcript 0 0.00 0.00 0.00 0.05 0.00 0.00 0.66 0.00 0.16 0.00 0.00 0.00 0.78 0.00 0.00 0.00 0.00 0.00 0.00 0.35 0.15 0.00 0.00 8 ER1a ExonRegion 1 8.90 11.84 4.63 2.83 4.93 48.72 40.89 3.81 6.08 2.94 30.10 0.00 0.00 60.30 4.88 27.22 49.17 29.86 7.59 49.97 110.54 28.18 193.49 9 E1_Ab KnownBoundary 0 2.89 9.21 10.08 2.00 3.31 31.69 27.16 14.13 10.33 4.51 40.33 0.00 0.00 7.06 0.00 18.97 29.64 51.15 0.00 50.69 60.48 20.76 67.18 10 ER1b ExonRegion 1 3.38 17.90 6.63 5.34 6.16 42.33 31.04 5.77 17.01 15.69 59.91 5.74 6.61 89.56 8.17 61.69 94.59 80.44 10.02 72.16 117.42 49.38 181.68 11 E1a_E2b KnownJunction 1 3.56 69.72 16.88 25.67 62.39 100.96 174.66 15.94 42.59 34.81 130.03 29.86 20.78 147.45 28.31 63.15 151.10 155.62 29.27 157.68 180.33 102.50 268.98 12 I1_SR6 SilentIntronRegion 0 11.41 10.50 5.92 6.06 9.76 2.42 15.80 6.43 3.21 4.69 0.71 5.97 5.13 0.59 1.78 4.01 3.94 0.85 1.63 5.20 0.75 2.03 9.56 13 ER2a ExonRegion 0 2.12 24.40 10.42 12.27 17.39 57.76 70.83 12.96 19.76 17.20 68.62 10.82 9.38 85.27 11.61 43.10 94.08 79.45 17.52 88.30 103.57 55.21 160.05 14 ER2b ExonRegion 1 13.54 82.30 20.77 37.33 26.76 84.15 99.02 28.12 57.07 43.32 158.64 65.58 55.54 211.05 14.21 109.42 241.52 171.91 36.99 209.59 220.68 155.80 326.54 15 E2_Da NovelBoundary 0 16.97 25.52 22.41 7.99 16.64 0.00 5.56 27.48 9.35 5.16 0.00 0.00 19.97 0.00 4.45 8.72 12.34 9.16 0.00 5.69 0.00 13.10 8.71 16 E2a_E5a KnownJunction 0 0.00 70.78 11.80 21.41 11.71 61.84 41.03 19.84 43.00 24.52 69.44 45.01 20.45 104.95 13.97 77.24 188.50 94.68 22.12 172.90 9.39 13.84 28.00 17 E2a_E7a NovelJunction 0 0.00 12.83 6.65 5.93 8.66 0.00 6.32 8.05 6.51 4.19 48.96 31.66 27.43 113.60 20.52 43.32 100.23 55.34 12.71 27.04 158.40 111.51 280.42 18 E2a_E7b KnownJunction 1 0.00 9.60 1.42 6.86 0.00 11.36 6.23 0.00 1.65 1.05 40.91 5.85 40.42 58.04 0.00 39.56 42.92 29.72 9.51 11.38 90.01 80.52 225.44 19 I2_SR1 SilentIntronRegion 0 21.43 31.72 14.14 24.33 24.36 7.92 29.05 13.08 8.51 8.44 1.08 7.32 15.60 3.24 4.80 8.35 6.71 2.80 6.57 11.00 2.12 8.98 20.24 20 I2_AR1 ActiveIntronRegion 0 11.07 71.12 13.08 16.83 6.65 9.07 9.97 10.98 2.47 8.48 0.00 3.28 6.46 2.24 1.41 2.29 4.55 0.75 0.90 7.62 1.52 4.17 10.16 21 I2_SR2 SilentIntronRegion 0 9.90 24.51 10.67 19.42 17.28 3.56 20.65 11.74 4.48 6.41 0.42 2.42 7.14 0.62 3.36 6.08 2.61 1.57 2.11 8.29 0.88 7.33 17.00 22 I2_AR2 ActiveIntronRegion 0 44.70 27.17 24.43 38.43 48.88 9.93 61.25 20.15 11.89 14.27 4.85 6.76 22.61 4.19 9.91 12.40 13.38 4.13 6.20 13.40 0.40 12.28 30.51 23 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E5_Aa NovelBoundary 0 3.78 15.00 3.37 4.56 4.24 0.00 31.97 4.56 4.83 0.00 2.68 0.00 12.66 2.12 0.00 7.95 19.92 12.81 22.02 11.63 5.87 6.06 40.29 26 ER5a ExonRegion 1 0.00 61.12 12.12 14.81 5.93 63.34 46.66 18.78 46.43 26.19 70.11 57.57 22.56 107.28 8.63 60.41 167.01 109.52 22.81 153.54 8.40 13.01 22.38 27 E5a_E7a KnownJunction 1 0.00 72.75 16.53 9.32 3.65 84.55 68.28 21.52 35.94 23.32 83.18 60.47 35.22 105.66 4.45 33.84 159.70 79.88 35.86 155.19 5.68 11.63 24.07 28 E5a_E7b NovelJunction 0 0.00 9.21 5.14 13.55 12.31 22.54 10.95 2.14 8.36 7.66 12.37 5.40 0.00 13.89 0.00 4.36 17.11 19.77 4.80 34.13 2.66 0.00 0.00 29 ER6a ExonRegion 0 0.00 0.87 0.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.86 1.68 0.70 0.41 0.64 0.47 0.00 0.00 0.30 0.79 0.30 4.20 30 E7_Ab NovelBoundary 0 2.82 50.85 10.64 12.32 6.79 46.62 30.83 11.38 16.12 18.19 43.59 12.15 70.45 61.16 5.07 47.59 76.95 52.11 11.29 77.85 34.78 21.86 122.41 31 ER7a ExonRegion 1 3.60 70.77 15.68 18.54 11.77 86.01 61.96 21.78 42.98 27.64 95.10 55.42 77.85 144.38 15.09 74.30 189.14 109.57 32.49 161.91 48.26 34.38 160.05 32 ER7b ExonRegion 1 12.47 77.00 20.30 65.94 40.66 116.81 111.82 31.98 81.58 49.66 196.33 123.10 128.44 264.45 27.66 162.95 322.01 188.37 57.74 239.74 253.17 216.93 551.09 33 E7a_E11a KnownJunction 1 0.00 34.73 9.99 19.51 23.51 19.59 32.28 11.01 32.38 18.51 58.65 33.91 46.91 73.52 4.57 52.46 115.57 60.02 13.74 64.56 68.57 92.95 161.34 34 E7b_E11b KnownJunction 0 0.00 18.81 8.52 14.88 16.89 30.78 51.27 27.52 19.47 15.02 53.86 49.67 46.43 26.25 0.00 49.56 90.98 65.45 13.18 68.01 51.34 84.20 171.75 35 ER7c ExonRegion 1 6.35 61.01 18.38 40.89 42.81 100.86 95.33 36.30 49.40 38.99 166.23 138.54 117.25 230.62 11.61 124.83 237.66 133.04 60.52 140.43 185.11 197.93 378.83 36 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER10a ExonRegion 0 0.00 0.00 0.00 0.14 0.00 0.00 1.99 0.00 0.49 0.00 0.00 0.00 2.35 0.00 0.00 0.00 0.00 0.00 0.00 1.06 0.44 0.00 0.00 39 ER11a ExonRegion 1 4.23 36.60 11.64 29.98 29.43 71.52 73.48 28.52 40.76 28.10 119.84 106.07 112.56 193.27 11.61 92.14 173.30 97.93 23.89 124.47 133.32 152.10 299.54 40 ER11b ExonRegion 1 8.44 101.77 17.00 52.90 47.74 172.12 182.69 37.48 91.86 61.97 232.78 217.65 235.77 273.94 15.17 171.92 256.76 124.99 49.01 220.70 167.86 256.12 492.98 41 E11a_E12a KnownJunction 1 12.74 206.67 22.83 66.79 55.60 155.48 178.28 26.53 105.53 86.90 193.58 240.23 352.74 229.21 6.30 155.94 296.77 109.06 27.86 214.95 119.85 195.33 537.87 42 ER12a ExonRegion 1 14.54 192.56 18.35 47.54 60.34 134.13 158.74 33.00 96.16 64.79 212.20 288.30 250.32 221.21 10.49 136.03 302.29 104.21 37.61 169.61 108.15 225.34 484.55 43 E12a_E13a KnownJunction 1 13.34 215.82 14.72 40.79 94.23 151.73 212.11 41.24 125.49 54.61 186.36 318.55 291.86 190.77 13.97 120.05 274.52 61.23 20.80 174.11 99.40 223.69 415.04 44 ER13a ExonRegion 1 18.22 146.86 15.04 39.86 69.75 126.95 168.05 43.04 119.20 59.40 193.14 277.60 212.61 224.14 22.53 130.07 280.28 77.15 24.51 208.36 126.04 250.08 433.62 45 E13a_E14a KnownJunction 1 6.67 117.28 20.52 41.09 59.00 159.68 188.31 29.33 120.98 72.23 199.31 286.14 184.89 177.47 19.16 139.71 281.81 107.36 12.42 195.52 165.25 172.49 343.50 46 ER14a ExonRegion 1 18.11 118.33 18.22 50.25 69.56 224.16 210.35 39.04 125.89 72.95 241.73 299.75 212.04 287.03 24.87 216.18 332.11 171.73 63.05 275.05 237.15 277.66 624.67 47 E14a_E15a KnownJunction 1 17.19 156.49 13.75 53.94 102.55 127.20 228.28 38.90 115.83 63.74 184.05 152.00 139.76 256.52 15.08 246.00 270.03 216.18 91.20 278.10 270.52 220.69 562.20 48 ER15a ExonRegion 1 15.31 161.44 17.76 50.84 60.03 147.48 170.12 44.63 132.88 68.11 221.71 152.24 192.02 328.87 26.52 223.82 319.84 145.43 57.86 278.55 254.83 284.19 581.52 49 E15a_E16a KnownJunction 1 22.45 147.80 24.42 55.14 58.06 198.07 196.70 31.75 141.43 87.17 278.39 146.00 131.32 401.44 30.53 243.27 364.09 176.18 74.64 274.52 321.49 329.80 553.49 50 ER16a ExonRegion 1 13.86 122.56 23.43 43.60 56.28 226.83 156.59 42.73 136.34 69.62 233.16 157.32 204.62 294.90 24.56 183.08 306.85 134.09 65.73 285.12 203.24 264.59 554.99 51 E16a_E17a KnownJunction 1 29.56 163.79 18.15 52.21 107.47 393.52 279.11 51.79 146.01 86.68 158.57 220.12 262.00 301.08 35.85 149.96 295.84 96.01 43.11 365.29 113.61 343.64 428.44 52 ER17a ExonRegion 1 13.66 116.67 19.20 46.89 63.34 221.71 199.88 47.31 137.74 68.09 239.44 295.15 267.27 248.15 26.70 176.90 332.03 110.69 45.17 283.87 169.37 297.86 477.61 53 E17a_E18a KnownJunction 1 10.22 86.50 15.17 36.93 39.73 225.95 139.86 21.73 120.17 48.59 178.05 260.03 175.31 216.73 19.04 89.63 370.17 80.30 25.60 187.02 237.53 229.63 313.11 54 ER18a ExonRegion 1 11.26 123.81 17.30 39.24 55.97 245.85 176.98 50.46 111.95 64.71 270.55 313.64 226.39 277.58 25.78 188.46 351.48 118.14 49.90 234.92 202.51 306.62 543.58 55 E18a_E19a KnownJunction 1 16.89 142.08 14.99 44.38 75.47 305.62 260.34 54.71 122.34 59.36 312.71 170.46 211.84 279.12 25.09 229.68 320.43 93.93 48.00 249.72 180.08 385.10 524.73 56 ER19a ExonRegion 1 9.45 102.87 15.03 46.60 69.70 239.29 188.58 57.82 145.76 66.00 321.69 289.02 219.12 269.15 24.34 158.50 281.38 87.41 27.39 256.04 126.87 368.25 487.27 57 E19a_E20a KnownJunction 1 18.15 101.56 14.55 45.42 73.43 183.76 190.34 69.00 137.87 52.81 266.44 255.68 350.14 214.73 26.70 130.31 283.96 73.46 18.54 243.65 84.70 395.57 582.69 58 ER20a ExonRegion 0 15.88 128.32 18.15 47.44 72.76 243.99 198.65 59.54 147.89 52.54 285.74 247.70 220.62 239.63 34.55 146.90 291.38 77.38 34.81 233.89 111.77 358.51 447.73 59 E20a_E21a KnownJunction 0 19.48 212.00 25.46 70.29 72.84 351.10 221.83 60.67 151.91 53.91 306.60 182.91 224.01 235.04 65.76 192.94 421.97 71.30 50.17 285.97 143.94 407.88 469.33 60 ER21a ExonRegion 0 16.15 136.79 19.18 48.97 59.17 258.85 184.13 60.09 138.66 71.79 231.21 294.18 244.22 213.88 31.58 119.62 301.67 60.80 36.02 280.37 101.12 363.28 349.19 61 E21a_E22a KnownJunction 1 30.52 200.95 19.34 49.91 85.14 268.08 233.22 56.72 154.80 65.92 224.32 358.17 318.32 289.37 27.94 110.91 321.65 75.86 49.22 231.44 86.74 344.62 320.54 62 ER22a ExonRegion 0 19.31 166.59 27.80 72.03 66.84 238.88 202.18 62.15 164.86 77.69 247.39 334.59 289.17 241.52 36.46 132.54 274.54 70.76 36.26 303.18 76.42 371.16 382.09 63 E22a_E23a KnownJunction 0 17.63 173.00 15.32 95.03 111.21 366.04 264.18 79.64 163.77 100.36 235.80 369.27 432.60 244.51 58.10 153.46 250.30 103.26 56.66 397.82 82.23 383.81 441.92 64 ER23a ExonRegion 0 22.29 161.07 20.54 66.86 78.12 262.36 206.36 61.45 148.58 85.98 220.94 389.96 365.87 206.56 41.33 111.24 242.35 83.05 39.30 321.71 75.92 364.66 359.41 65 E23a_E24a KnownJunction 1 17.11 228.78 24.66 65.26 91.60 343.33 205.97 62.76 159.03 72.23 196.00 499.96 355.98 237.68 60.82 99.12 223.09 62.51 16.94 315.43 47.32 419.63 289.55 66 I23_AR2 ActiveIntronRegion 0 2.35 13.88 0.40 5.20 2.43 10.44 25.07 4.07 7.14 3.71 6.00 7.30 26.37 6.24 1.89 3.95 6.01 2.05 0.00 16.23 2.37 19.16 6.58 67 ER24a ExonRegion 0 31.91 235.58 23.88 52.11 84.35 268.26 232.97 68.22 164.22 83.14 205.51 361.99 341.54 222.29 33.88 117.40 224.68 84.32 34.54 280.99 62.56 347.16 391.10 68 E24a_E25a KnownJunction 1 22.97 270.87 20.82 67.26 124.28 281.66 269.08 76.19 201.13 70.59 204.31 377.52 291.86 241.75 26.58 150.90 220.76 81.46 35.48 263.27 65.36 365.81 498.61 69 ER25a ExonRegion 1 36.27 244.04 31.28 80.24 104.84 325.20 297.63 87.04 178.43 77.11 272.89 380.49 417.99 300.66 37.50 214.86 312.02 125.19 59.59 287.00 149.21 406.38 620.53 70 E25a_E26a KnownJunction 1 31.78 243.31 28.27 70.25 69.02 327.99 282.86 71.14 138.66 77.47 196.94 253.43 294.30 314.97 39.19 192.86 294.90 142.23 82.36 226.01 177.86 392.20 778.43 71 ER26a ExonRegion 1 46.62 261.58 39.65 81.28 98.51 322.38 276.81 83.04 191.57 98.74 301.50 289.77 381.56 362.38 40.65 280.67 439.68 195.46 79.31 280.32 287.79 439.73 800.80 72 E26a_E27a KnownJunction 0 54.90 298.76 55.79 81.77 151.19 435.71 453.37 74.51 187.21 119.19 331.98 291.39 308.42 380.54 55.38 183.29 510.24 153.83 127.91 407.47 301.84 412.65 827.77 73 ER27a ExonRegion 1 29.99 234.49 32.31 106.97 149.60 386.89 308.66 76.68 216.36 102.71 324.05 258.54 361.72 366.31 46.45 262.97 429.87 202.10 82.71 344.85 249.87 370.11 747.51 74 E27a_E28a KnownJunction 1 38.15 252.32 41.39 126.32 131.15 396.14 222.67 84.16 236.95 117.60 266.12 218.77 453.70 435.17 60.82 290.69 388.03 213.86 99.11 354.17 261.07 365.26 947.53 75 E28_Aa NovelBoundary 0 23.41 6.58 0.00 8.96 43.29 0.00 22.48 10.80 7.58 0.00 0.00 0.00 12.66 0.00 0.00 0.00 0.00 0.00 0.00 5.62 0.00 15.92 16.13 76 ER28a ExonRegion 0 41.85 238.02 45.60 119.09 111.65 285.36 209.45 111.45 218.13 120.48 368.58 285.50 337.51 375.89 54.69 300.86 387.76 213.50 108.69 381.83 198.69 531.26 1021.79 77 E28a_E29a KnownJunction 0 22.37 225.22 34.98 82.77 123.94 259.68 268.86 126.26 214.18 97.86 366.94 273.69 190.57 286.83 43.51 132.87 406.92 122.49 52.14 356.98 233.27 241.26 454.30 78 ER29a ExonRegion 0 33.76 231.59 32.31 102.38 122.80 376.12 305.10 75.57 192.23 111.06 270.83 243.04 323.84 246.55 43.04 135.91 280.99 108.60 53.47 282.61 131.26 310.61 496.95 79 E29a_E30a KnownJunction 0 57.34 309.29 49.85 133.85 208.40 545.88 479.56 137.84 263.63 154.89 344.09 320.65 416.53 249.10 56.86 273.43 356.61 194.33 169.70 419.81 106.32 647.91 1098.54 80 ER30a ExonRegion 0 21.88 142.57 12.53 42.50 60.72 191.06 168.42 40.83 81.67 56.83 109.61 152.00 185.12 118.77 23.06 90.83 138.86 59.85 39.45 152.34 44.09 249.41 332.16 81 E30_Da KnownBoundary 1 41.93 165.43 1.83 11.89 40.83 164.17 186.90 7.15 13.08 13.30 4.53 119.89 103.24 5.06 4.45 4.19 8.13 11.48 17.41 34.45 2.84 46.41 98.51 82 ER30b ExonRegion 0 2.40 14.87 0.17 0.47 1.61 13.49 11.28 0.36 1.27 0.37 0.44 1.27 1.93 0.36 0.02 0.04 0.50 0.42 0.20 0.52 0.33 0.82 1.29 83 E30_Db KnownBoundary 0 7.04 9.80 0.00 3.96 15.28 0.00 5.39 2.30 1.27 1.34 7.05 0.00 0.00 0.00 0.00 4.36 4.58 0.00 0.00 8.76 0.00 9.12 7.68 84 ER30c ExonRegion 0 111.58 360.07 91.28 167.02 228.80 322.93 259.34 142.02 135.49 112.23 65.85 123.69 89.56 80.24 75.93 46.56 56.16 18.29 35.83 101.85 19.62 259.87 139.33