Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ACTR6 Gene 0 63.49 155.63 62.83 89.72 123.32 116.36 156.75 68.89 62.26 99.43 83.44 112.22 71.45 55.35 65.54 39.66 47.69 26.14 34.00 51.06 14.58 72.21 26.07 2 416520 Transcript 0 7.49 18.29 2.44 15.39 10.41 18.72 10.12 2.31 7.30 9.00 2.10 5.98 7.59 4.92 2.16 5.14 4.52 2.98 4.70 6.59 2.60 2.89 0.87 3 188312 Transcript 0 118.90 220.97 97.18 143.17 213.37 192.18 280.01 99.42 85.34 142.62 128.10 242.52 144.44 102.91 104.86 52.92 70.65 27.94 53.38 77.14 12.77 115.43 31.75 4 IG23_AR1 ActiveIntergenicRegion 0 9.99 3.45 2.29 3.41 4.90 8.80 12.28 5.04 7.79 6.25 25.80 30.94 45.92 28.67 14.59 22.23 17.28 9.31 3.88 6.90 0.67 1.59 4.92 5 IG23_AR2 ActiveIntergenicRegion 0 7.90 3.99 0.00 3.37 12.11 8.30 10.01 1.66 4.92 6.43 22.75 6.66 26.16 9.20 16.14 5.68 2.16 4.12 8.78 7.80 1.36 0.00 1.77 6 IG23_AR4 ActiveIntergenicRegion 0 9.11 3.83 2.27 5.56 6.61 7.39 14.61 6.47 6.33 3.72 24.55 9.82 20.30 27.55 15.66 13.86 13.24 3.15 3.96 9.92 0.00 1.30 1.83 7 IG23_AR9 ActiveIntergenicRegion 0 0.82 0.00 1.44 1.41 0.52 2.58 3.51 1.25 5.28 3.97 11.90 1.53 1.87 14.82 12.81 8.02 5.09 2.90 2.46 3.34 0.85 0.00 0.00 8 IG23_SR8 SilentIntergenicRegion 0 0.00 0.00 0.77 0.66 0.00 2.51 0.62 0.00 2.25 1.68 6.58 3.56 4.31 13.28 1.59 7.43 2.72 1.22 0.00 1.54 1.81 0.00 0.00 9 ER1a ExonRegion 0 15.91 32.61 7.09 12.69 27.67 41.88 45.26 8.47 11.64 13.56 27.03 1.33 4.87 11.17 13.67 19.26 21.56 15.65 15.04 14.53 12.19 15.93 17.40 10 E1a_E2a KnownJunction 1 2.82 2.50 24.30 35.06 0.00 21.86 9.32 11.83 39.79 33.52 31.59 0.00 7.63 4.59 4.57 0.00 30.01 0.00 3.76 25.18 27.74 2.33 3.16 11 I1_AR1 ActiveIntronRegion 0 0.00 1.48 1.49 6.26 0.00 4.68 1.93 3.06 2.01 4.33 9.86 1.30 4.22 4.00 2.40 16.05 12.02 4.01 18.02 3.10 7.23 3.04 16.76 12 ER2a ExonRegion 1 10.46 24.08 60.83 79.31 47.69 43.79 47.77 67.60 83.31 111.40 239.06 36.14 61.45 98.88 58.47 94.81 164.85 70.64 88.92 95.06 81.09 113.32 65.45 13 E2a_E3a KnownJunction 1 15.04 37.30 95.41 137.18 67.40 102.78 88.94 116.86 99.85 129.23 66.39 101.28 116.55 94.89 92.96 242.07 37.68 191.85 151.44 103.16 14.58 153.14 177.13 14 ER3a ExonRegion 0 15.28 52.52 54.84 101.56 171.95 183.03 153.75 67.66 65.14 95.76 93.79 84.90 72.12 58.19 54.70 105.75 50.57 134.38 63.11 69.35 8.91 81.92 81.37 15 E3a_E4a KnownJunction 1 3.41 75.32 36.10 84.94 348.30 430.95 422.50 40.29 47.08 89.29 117.03 77.73 60.39 48.15 60.20 23.75 71.62 52.07 29.18 28.76 6.18 75.32 33.38 16 ER4a ExonRegion 0 68.24 224.50 54.38 107.49 215.63 328.93 359.69 71.17 55.16 112.85 122.93 111.90 151.78 82.12 61.25 32.43 57.02 25.64 18.14 55.39 11.13 77.71 18.76 17 E4_Da KnownBoundary 0 0.00 23.61 2.90 17.78 3.65 8.40 7.20 1.52 7.00 12.38 2.47 7.65 13.64 11.65 8.90 3.33 4.58 0.00 0.00 5.62 0.00 2.57 0.00 18 E4a_E5a KnownJunction 0 127.21 244.10 61.26 126.02 134.13 131.06 212.29 57.67 69.27 107.61 125.40 212.02 171.74 115.60 94.44 50.50 55.26 27.48 35.01 57.08 9.14 117.14 14.68 19 ER4b ExonRegion 0 7.49 18.29 2.44 15.39 10.41 18.72 10.12 2.31 7.30 9.00 2.10 5.98 7.59 4.92 2.16 5.14 4.52 2.98 4.70 6.59 2.60 2.89 0.87 20 Ix_SR2 SilentIntronRegion 0 7.74 20.45 3.76 7.90 5.51 10.48 24.22 8.25 8.00 12.51 6.63 13.22 22.15 7.34 5.07 4.76 8.30 8.41 8.01 12.16 5.04 1.43 6.04 21 Ix_AR2 ActiveIntronRegion 0 14.27 17.84 7.09 14.92 15.28 16.09 22.15 7.88 5.26 14.30 4.34 7.59 10.75 5.92 5.95 0.61 2.69 1.88 1.30 10.42 0.45 4.68 1.80 22 ER5a ExonRegion 0 89.61 165.89 72.16 136.02 143.03 127.17 201.03 78.42 81.10 112.83 109.39 206.13 134.42 92.05 85.42 35.43 51.55 27.19 41.97 70.29 8.13 109.97 17.97 23 E5a_E6a KnownJunction 0 136.91 137.34 85.09 166.75 227.93 141.51 293.11 106.96 84.61 99.93 105.97 270.24 138.14 113.66 116.57 47.08 78.45 22.26 43.30 90.95 2.53 145.00 12.21 24 ER6a ExonRegion 1 96.17 127.90 105.32 158.43 269.45 226.30 289.95 89.49 88.73 131.03 105.26 235.61 225.94 121.21 106.33 51.36 60.57 36.40 45.49 87.38 3.71 137.48 30.91 25 E6a_E7a KnownJunction 1 68.75 128.99 113.83 133.28 226.23 252.53 268.38 76.32 77.31 139.63 78.70 242.78 229.86 89.65 116.20 45.97 40.30 30.88 49.98 59.51 8.22 114.63 44.82 26 ER7a ExonRegion 1 78.87 132.41 90.91 121.56 160.63 188.03 256.55 92.53 92.51 123.53 111.29 247.35 183.67 100.71 82.64 50.68 60.05 34.25 52.80 77.73 10.35 118.89 34.35 27 E7a_E8a KnownJunction 0 101.87 145.17 115.70 169.18 201.95 235.26 297.04 105.93 90.94 132.21 167.88 311.50 122.88 123.55 102.97 40.59 70.78 7.96 91.01 66.86 7.72 131.96 19.46 28 ER8a ExonRegion 0 89.11 162.51 102.40 129.65 174.06 170.03 244.68 104.54 84.79 148.28 172.79 292.16 161.18 108.49 97.14 56.40 88.62 24.14 61.69 97.28 22.15 124.59 42.60 29 E8a_E9a KnownJunction 0 119.28 233.58 83.29 137.68 205.35 177.28 359.75 108.23 66.72 170.55 163.78 321.70 175.31 129.73 99.02 38.11 83.50 23.92 50.82 104.44 27.49 94.85 58.99 30 ER9a ExonRegion 0 101.73 249.59 80.85 128.96 191.42 197.44 272.00 110.80 86.52 165.37 178.76 264.80 144.49 115.93 102.54 74.46 98.18 37.33 68.39 84.45 21.17 109.78 41.59 31 E9_Da NovelBoundary 0 6.96 11.25 2.60 32.13 22.67 13.40 26.50 18.24 8.36 25.76 7.21 6.30 0.00 7.89 0.00 7.26 4.77 3.77 4.80 15.47 0.00 11.21 3.59 32 E9a_E10a KnownJunction 0 144.84 309.42 111.62 127.42 294.40 268.82 373.70 83.13 72.16 170.76 150.83 210.07 104.70 98.42 129.06 55.03 115.38 25.04 48.66 58.16 18.10 106.85 33.04 33 Ix Intron 0 26.76 18.33 16.18 24.75 22.18 14.71 31.26 14.96 14.77 28.80 7.46 14.19 19.11 6.94 8.06 7.27 8.70 4.61 10.47 13.17 2.78 9.79 5.61 34 Ix_AR1 ActiveIntronRegion 0 23.27 16.70 16.67 22.72 22.55 16.41 31.90 15.12 14.39 29.88 6.86 15.04 17.28 7.06 6.92 5.46 10.34 3.56 10.28 12.49 2.45 8.59 4.95 35 Ix_SR2 SilentIntronRegion 0 35.85 22.89 16.91 31.08 21.51 12.29 31.50 15.94 16.43 29.52 9.29 13.37 24.69 7.06 11.16 11.37 6.44 7.24 12.06 15.80 3.77 13.27 6.99 36 E10_Aa NovelBoundary 0 36.75 36.57 3.61 31.56 35.57 10.90 41.07 17.29 9.00 17.76 9.11 0.00 14.61 7.06 4.45 7.69 4.77 1.78 4.80 14.38 0.00 10.84 4.27 37 ER10a ExonRegion 0 163.55 378.25 110.64 143.41 243.40 194.37 291.20 119.18 94.01 152.54 131.51 234.04 87.63 92.47 111.75 79.91 81.79 37.41 59.31 85.87 18.41 90.28 37.75 38 E10_Da NovelBoundary 0 0.00 6.45 4.38 16.31 8.32 2.73 20.62 15.20 7.06 10.50 7.53 19.81 6.82 0.00 8.90 3.85 0.00 0.00 21.84 8.88 3.03 0.00 16.65 39 E10a_E11a KnownJunction 0 237.89 373.68 102.89 166.58 319.44 244.46 345.40 127.17 93.03 155.64 109.29 185.91 59.25 77.87 104.70 77.67 64.89 38.30 66.26 73.89 12.29 101.46 32.52 40 Ix_SR1 SilentIntronRegion 0 6.13 8.13 5.07 19.78 16.99 8.58 18.63 7.62 4.30 8.95 1.95 6.09 7.45 3.11 2.97 2.67 2.00 2.49 5.01 5.61 0.99 4.73 2.86 41 Ix_AR1 ActiveIntronRegion 0 7.26 8.13 4.55 25.31 17.97 3.67 13.43 9.14 3.71 17.37 0.28 0.00 12.06 0.00 5.80 0.00 6.60 1.85 0.00 6.38 0.00 2.08 3.78 42 ER11a ExonRegion 0 108.75 304.79 124.56 159.46 195.74 136.25 215.05 131.58 113.10 186.83 82.54 160.94 82.91 61.42 119.26 37.65 39.71 18.65 32.63 66.08 9.37 113.09 23.61