Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SARNP Gene 0 262.17 366.96 225.11 124.00 382.31 318.52 554.18 235.73 147.43 234.42 549.59 307.05 215.15 463.59 584.39 509.01 462.95 266.49 431.06 250.39 233.25 230.20 240.62 2 444631 Transcript 0 15.23 13.07 28.20 15.94 15.58 12.97 34.61 22.58 14.79 17.20 33.48 27.28 10.76 24.74 39.19 31.14 24.32 19.13 16.85 14.05 7.89 14.77 15.10 3 336133 Transcript 0 79.57 138.88 89.16 49.13 107.79 85.70 148.33 137.13 65.87 112.42 169.81 155.74 79.77 164.29 252.60 95.33 92.24 79.96 56.69 115.97 80.28 107.69 20.42 4 ER1a ExonRegion 0 11.97 10.46 1.68 0.47 6.19 14.20 18.50 0.69 3.71 1.28 18.17 0.00 13.53 17.77 13.84 34.48 17.82 14.36 4.91 3.89 6.61 3.57 14.85 5 E1_Ab KnownBoundary 0 31.78 22.43 2.78 5.26 14.35 25.10 40.54 1.56 11.23 1.13 29.59 0.00 52.11 47.27 29.54 64.60 21.32 39.26 11.48 8.25 14.89 4.84 33.46 6 ER1b ExonRegion 1 1308.31 1777.02 295.75 206.72 1689.69 1753.24 3198.81 273.00 185.49 272.45 789.17 38.97 763.81 1339.78 1846.70 2409.44 1345.17 717.55 2130.61 678.34 556.00 543.43 1331.14 7 E1a_E2a KnownJunction 1 2166.16 2510.34 633.60 459.58 2477.17 2440.13 4993.30 616.11 398.20 615.84 1008.62 42.91 302.25 544.00 1144.82 2996.91 1765.96 1411.40 2101.61 1015.71 661.76 773.50 1691.64 8 ER2a ExonRegion 0 384.36 429.51 275.49 142.94 397.00 356.89 608.36 254.72 175.76 282.46 517.84 152.31 230.52 193.51 286.47 498.96 610.14 373.47 421.23 226.45 339.92 142.12 269.23 9 E2a_E3a KnownJunction 1 277.23 180.17 165.22 61.83 147.54 82.62 160.97 197.03 129.14 270.71 1604.20 251.63 189.76 378.36 446.75 135.95 1387.84 75.03 204.62 318.24 898.68 108.14 43.28 10 E2a_E4a NovelJunction 0 3.41 0.00 6.48 27.77 18.68 0.00 18.20 8.83 7.67 21.52 6.74 0.00 0.00 4.77 0.00 0.00 15.24 6.59 9.13 6.01 14.83 2.57 4.18 11 ER3a ExonRegion 1 220.48 201.37 421.87 214.18 125.70 90.44 167.97 395.30 256.35 415.72 1899.83 435.34 225.32 890.54 982.41 693.58 1818.79 543.55 1052.80 643.95 936.39 327.29 321.53 12 E3a_E4a KnownJunction 0 244.19 259.23 569.08 348.67 142.95 110.50 208.14 535.93 332.17 489.59 1369.82 502.81 288.13 1869.75 2104.34 1441.59 1431.60 988.83 2090.04 888.38 603.94 758.13 764.94 13 ER4a ExonRegion 1 189.90 312.54 460.38 271.03 274.89 226.58 337.90 471.26 275.50 457.24 765.57 574.80 906.56 1347.90 1867.60 2899.48 717.61 1099.49 2554.99 618.18 347.21 718.20 1445.35 14 E4a_E5a KnownJunction 0 251.23 409.20 425.62 193.12 683.87 296.99 583.74 372.91 218.05 401.29 581.15 731.19 488.60 480.96 685.33 678.88 454.88 596.06 271.07 314.15 256.13 186.09 372.35 15 ER5a ExonRegion 0 137.33 388.34 389.86 172.93 2640.34 1862.79 3091.53 393.26 214.01 387.21 880.84 654.50 464.22 563.41 703.05 496.63 704.23 410.13 330.18 359.16 356.87 249.30 228.55 16 E5a_E6a KnownJunction 0 133.95 682.31 352.23 212.13 5380.56 3722.17 6535.24 413.20 234.89 383.00 1115.60 783.56 650.28 733.42 1133.69 494.57 959.42 241.96 500.81 383.12 450.85 315.60 192.58 17 ER6a ExonRegion 0 271.20 1180.79 352.06 170.19 1056.05 969.93 1815.81 357.51 227.29 367.29 927.06 764.79 336.73 732.79 866.89 443.77 681.32 329.70 306.91 343.50 352.65 269.34 152.86 18 E6a_E7a KnownJunction 0 698.12 1357.98 328.99 168.54 221.99 244.86 467.06 321.40 232.17 335.88 741.56 651.96 293.65 738.78 870.02 516.70 572.70 294.40 252.34 319.78 276.02 310.70 162.53 19 E7a_E8a KnownJunction 1 670.49 859.25 256.26 127.96 267.49 203.41 334.27 247.80 129.11 252.61 700.76 906.75 193.17 806.82 992.65 367.51 460.03 207.14 279.54 299.71 172.91 236.12 121.73 20 ER7a ExonRegion 1 690.71 1196.31 405.60 206.88 253.27 261.60 395.50 418.82 253.16 410.99 918.13 787.51 253.10 808.70 894.49 542.87 641.85 377.20 323.81 366.62 296.66 321.36 167.49 21 E8a_E9a KnownJunction 1 802.88 735.40 290.11 213.83 370.80 212.26 413.63 354.55 201.97 293.84 935.55 770.80 131.32 867.51 1028.50 492.43 653.58 235.00 385.99 377.24 337.12 342.30 265.05 22 ER8a ExonRegion 1 730.12 903.61 395.65 233.32 320.06 229.30 367.30 445.74 249.07 410.42 1042.20 885.21 152.25 887.58 1021.35 523.67 717.69 372.11 382.98 404.91 313.69 346.91 213.13 23 ER9a ExonRegion 1 788.14 607.33 385.35 217.17 424.51 233.80 398.72 429.61 268.66 427.99 1126.35 666.17 213.91 866.36 923.73 570.78 773.70 312.94 372.18 409.47 373.96 462.15 251.32 24 E9a_E10a KnownJunction 0 987.36 674.88 437.18 227.84 590.58 340.09 681.74 442.24 308.82 485.56 1021.21 652.11 395.75 928.13 972.13 569.77 671.06 275.87 339.40 413.10 306.72 309.41 260.96 25 I9_SR4 SilentIntronRegion 0 51.52 61.77 27.61 22.60 54.73 18.05 84.76 32.23 17.95 25.19 5.85 21.24 43.42 4.40 14.00 14.10 25.80 8.87 16.86 20.94 5.27 7.29 4.15 26 I9_AR7 ActiveIntronRegion 0 54.19 47.27 16.84 17.45 41.10 16.31 81.88 34.59 18.27 20.33 4.80 25.88 39.85 6.54 22.30 25.44 28.45 21.46 15.06 25.19 17.46 7.90 11.49 27 I9_AR9 ActiveIntronRegion 0 25.84 30.82 18.90 37.66 59.71 18.34 68.92 37.30 32.76 31.21 14.85 64.49 43.44 12.74 34.20 27.22 36.48 23.73 36.38 38.41 22.62 15.68 15.30 28 I9_AR1 ActiveIntronRegion 1 21.63 27.36 22.73 19.21 71.91 21.09 95.20 27.68 21.69 19.84 13.77 64.54 16.34 8.98 27.02 19.09 23.57 15.73 7.81 29.45 22.31 19.60 16.24 29 I9_AR3 ActiveIntronRegion 0 25.65 27.17 21.63 26.44 59.71 30.08 81.33 22.36 16.17 11.62 6.49 12.10 20.93 5.93 18.33 23.66 19.36 35.24 17.91 22.81 18.87 7.37 18.21 30 I9_AR5 ActiveIntronRegion 0 20.11 44.33 23.65 26.17 72.65 30.81 52.36 23.33 15.75 13.82 7.63 25.76 15.95 2.35 17.55 9.96 8.91 3.70 11.63 11.60 2.09 30.00 21.88 31 I9_AR6 ActiveIntronRegion 0 24.55 41.88 19.62 31.40 56.21 31.27 76.91 32.33 22.75 18.39 9.54 27.18 38.28 11.03 18.22 19.96 12.91 20.63 15.65 23.42 13.32 13.08 18.41 32 I9_AR8 ActiveIntronRegion 0 44.45 61.69 24.51 22.94 108.81 72.74 123.35 41.48 22.44 22.17 19.33 30.31 39.87 19.49 13.54 62.41 23.11 15.71 46.72 40.43 20.20 12.50 61.67 33 I9_AR9 ActiveIntronRegion 0 28.39 47.53 14.10 12.88 76.70 40.63 82.53 26.74 12.40 10.34 14.86 17.40 36.97 4.84 18.94 31.47 15.73 7.61 24.30 21.40 9.64 8.54 27.81 34 I9_AR10 ActiveIntronRegion 0 55.14 30.53 25.42 34.48 88.88 36.57 102.87 42.95 27.75 24.48 10.66 17.08 25.78 7.92 21.81 26.12 18.70 17.97 24.25 22.34 12.64 19.53 20.51 35 ER10a ExonRegion 0 448.51 363.45 385.95 227.39 258.72 230.20 387.10 360.33 243.66 384.47 870.21 560.33 254.62 728.83 950.64 459.49 641.66 289.87 347.06 336.10 274.70 300.00 189.45 36 E10a_E11a KnownJunction 0 240.04 279.62 385.44 201.61 315.96 301.42 302.91 413.33 242.07 388.13 785.83 566.43 320.27 644.24 843.69 361.10 579.99 288.60 366.32 400.25 357.57 286.57 162.53 37 I10_AR3 ActiveIntronRegion 0 30.10 26.67 34.73 25.90 34.66 9.64 41.28 18.11 12.95 15.09 10.53 4.07 8.36 4.82 14.56 24.41 14.05 27.52 19.03 24.81 17.28 9.39 9.78 38 ER11a ExonRegion 0 185.16 268.03 313.86 171.76 237.58 170.35 280.01 371.36 240.57 363.89 770.81 390.66 195.12 573.08 696.74 378.21 487.39 254.07 297.19 316.81 283.07 381.02 148.41 39 E11_Da KnownBoundary 1 95.65 215.49 131.49 82.84 101.36 49.63 146.53 199.21 137.61 205.14 313.08 306.10 51.46 184.59 467.52 94.51 173.45 125.31 73.41 139.40 155.25 140.96 32.18 40 E11a_E12a KnownJunction 0 20.08 19.14 69.28 38.16 31.75 14.59 62.53 54.30 33.19 42.39 71.12 63.92 13.64 44.09 84.80 48.02 45.63 35.15 34.73 30.68 11.55 29.70 23.05 41 ER11b ExonRegion 0 79.57 138.88 89.16 49.13 107.79 85.70 148.33 137.13 65.87 112.42 169.81 155.74 79.77 164.29 252.60 95.33 92.24 79.96 56.69 115.97 80.28 107.69 20.42 42 I11 Intron 0 32.68 58.76 46.81 66.06 132.41 24.21 101.01 57.48 26.69 62.18 19.29 18.97 22.90 26.99 33.12 21.03 31.69 30.43 48.37 82.14 27.55 15.51 13.37 43 I11_AR1 ActiveIntronRegion 0 35.61 74.58 48.56 75.41 143.17 27.03 96.70 59.01 27.70 57.28 14.58 21.16 21.17 18.34 25.49 16.12 22.72 21.67 45.85 75.00 17.76 16.00 9.70 44 I11_AR2 ActiveIntronRegion 0 24.84 34.84 34.33 52.52 126.20 21.32 95.51 48.28 18.73 58.64 14.30 20.20 21.39 22.57 21.59 18.34 24.60 28.02 43.23 73.25 19.98 12.05 13.56 45 I11_AR3 ActiveIntronRegion 0 26.37 60.37 33.49 61.82 99.07 21.70 103.79 47.54 27.26 52.94 13.86 12.17 18.08 19.58 19.19 15.65 23.61 38.51 51.33 75.25 25.62 15.25 12.41 46 I11_SR1 SilentIntronRegion 0 22.54 37.50 51.58 61.90 84.93 19.74 75.03 60.42 30.87 60.67 22.11 10.85 15.95 22.71 24.80 25.50 30.00 38.73 65.51 89.96 33.66 11.48 11.93 47 I11_AR4 ActiveIntronRegion 0 48.23 64.67 73.12 69.31 163.46 25.60 132.20 76.67 35.51 90.80 44.60 20.25 37.64 67.15 90.25 42.07 76.81 48.57 54.36 120.27 67.07 22.22 24.77 48 E12_Aa NovelBoundary 0 101.65 98.40 79.33 53.61 197.96 40.54 159.16 102.19 23.23 102.21 57.38 37.36 19.97 93.30 135.24 88.95 106.50 56.63 77.56 139.60 91.31 23.45 32.35 49 ER12a ExonRegion 0 13.65 9.60 13.63 9.20 8.80 10.11 22.80 12.74 7.46 7.92 11.15 17.92 5.11 12.37 18.93 10.91 9.51 7.88 10.91 7.59 5.49 11.05 7.40