Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HOXC6 Gene 0 13.99 0.42 7.95 102.42 65.55 63.39 39.46 64.57 79.98 21.34 2.99 0.00 3.14 1.38 6.14 0.34 27.98 87.59 24.89 22.74 7.98 34.75 14.05 2 394331 Transcript 0 2.57 0.09 3.49 3.56 0.73 2.03 0.12 2.34 1.90 2.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.20 2.65 5.13 4.83 8.09 4.42 3 243108 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 441431 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 1.80 0.19 0.33 0.60 1.47 1.55 0.24 0.37 0.33 0.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.91 0.69 0.47 0.45 4.31 0.90 6 E1a_E2b KnownJunction 0 3.33 0.00 6.65 6.53 0.00 2.50 0.00 4.31 3.47 4.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.48 4.61 9.78 9.20 11.88 7.94 7 Ix Intron 0 3.20 0.30 0.57 12.62 2.79 12.04 1.93 1.69 7.98 1.62 0.42 0.16 1.58 0.51 0.92 0.34 9.53 36.94 7.13 7.49 5.91 10.02 7.78 8 Ix_AR1 ActiveIntronRegion 0 2.52 0.22 0.20 12.96 1.79 10.77 2.37 1.82 9.51 1.54 0.27 0.11 1.89 0.15 0.89 0.16 13.33 43.65 9.30 9.82 6.74 10.25 8.25 9 Ix_SR2 SilentIntronRegion 0 4.46 0.42 0.92 16.64 4.13 14.91 2.05 2.19 9.38 1.94 0.18 0.20 1.98 0.87 1.17 0.59 10.71 44.98 7.56 8.04 6.58 12.21 9.08 10 E2_Aa NovelBoundary 0 7.04 0.00 3.73 24.41 4.24 29.13 2.25 4.52 12.36 5.94 0.00 0.00 0.00 2.47 0.00 0.00 27.77 40.75 25.51 11.38 7.97 30.13 16.82 11 ER2a ExonRegion 0 11.13 0.00 2.54 41.99 174.32 140.76 123.01 59.43 60.17 20.34 1.77 0.00 4.91 2.26 2.50 1.82 32.34 45.74 28.19 16.60 8.81 13.59 5.56 12 E2_Ab KnownBoundary 0 14.37 0.00 9.70 54.77 8.15 39.86 12.54 33.23 50.58 17.00 0.00 0.00 6.82 2.47 0.00 0.00 30.39 57.79 31.91 40.20 27.74 23.27 32.44 13 ER2b ExonRegion 0 25.93 0.40 17.66 130.26 119.88 113.64 77.45 89.47 115.04 36.44 3.52 0.00 2.43 2.61 9.76 1.32 40.08 132.19 33.51 36.56 13.46 42.95 24.22 14 E2_Da NovelBoundary 0 9.93 0.00 0.00 8.82 0.00 2.38 0.00 2.55 8.88 4.24 0.00 0.00 0.00 4.83 0.00 0.00 0.00 7.46 0.00 2.75 8.77 9.37 0.00 15 E2a_E3a KnownJunction 0 27.04 3.03 10.79 125.76 27.93 71.21 45.80 100.67 121.18 34.41 2.53 0.00 0.00 4.59 5.19 0.00 16.83 135.26 18.07 45.25 11.49 27.62 20.15 16 E3_Aa NovelBoundary 0 5.93 0.00 1.30 21.58 18.08 9.65 12.94 2.14 6.31 5.48 0.00 0.00 0.00 0.00 0.00 0.00 8.51 14.38 3.95 6.46 2.35 5.63 19.55 17 ER3a ExonRegion 0 16.68 0.59 9.49 151.35 64.51 66.98 35.01 88.55 110.42 27.12 4.44 0.00 4.60 1.54 8.51 0.00 37.12 121.71 33.41 30.15 9.83 49.86 18.54