Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PCBP2 Gene 0 912.05 2503.10 2186.46 3064.48 1849.40 1327.81 2554.99 1355.04 1038.14 1957.22 1737.14 906.88 699.55 1630.68 1566.37 1363.47 1414.18 1878.03 2376.09 1438.86 1131.46 1085.05 920.61 2 439930 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 447282 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 359282 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 359462 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 437231 Transcript 0 1017.37 4963.39 3499.94 4563.16 2116.72 1189.77 4497.44 967.50 672.04 2083.12 888.65 340.46 360.85 927.13 937.76 707.68 611.03 4015.26 2955.00 2315.98 504.72 925.30 906.21 7 455667 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 379777 Transcript 1 146.10 531.48 453.50 535.30 148.22 186.03 457.39 216.71 154.25 413.08 448.69 183.81 108.76 460.36 373.32 213.79 371.39 301.08 251.02 348.48 137.15 106.85 123.69 9 IG28 Intergenic 0 6.44 1.94 3.81 2.88 3.98 1.30 3.00 2.64 2.48 1.51 5.06 6.67 3.99 4.45 8.63 4.31 4.44 1.30 1.24 3.24 9.36 11.06 9.56 10 IG28_SR1 SilentIntergenicRegion 0 6.50 2.99 2.19 3.25 5.36 0.00 3.36 0.34 1.97 1.14 7.74 9.52 2.06 6.99 6.06 3.97 3.08 1.84 0.85 4.26 5.28 10.57 10.98 11 IG28_AR1 ActiveIntergenicRegion 0 7.58 3.14 6.45 5.70 5.65 3.39 4.16 4.99 3.41 1.67 6.14 10.09 2.42 5.15 13.75 7.58 7.96 2.68 2.59 2.72 15.29 10.99 10.50 12 IG28_SR2 SilentIntergenicRegion 0 5.95 0.91 3.54 1.49 2.57 1.09 2.33 2.84 2.35 1.64 3.24 3.78 5.66 2.86 7.81 3.12 3.66 0.44 0.87 2.94 8.97 11.37 8.46 13 ER1a ExonRegion 0 1.15 4.07 0.00 0.00 3.65 0.00 3.73 0.00 0.00 0.00 1.05 0.00 10.23 5.32 8.18 4.86 9.90 0.00 2.32 0.00 13.82 6.44 0.00 14 ER1b ExonRegion 0 92.72 325.26 98.57 112.52 96.03 225.08 377.49 51.40 55.95 118.72 142.18 37.78 56.14 365.64 251.68 107.38 155.68 116.75 170.62 220.91 145.62 69.32 96.45 15 E1a_E2a KnownJunction 1 1314.60 3599.56 1079.00 1392.76 1394.40 2325.82 4060.36 616.48 595.91 1179.37 1346.24 141.95 300.30 1862.68 1805.80 1013.58 1251.52 1385.87 1570.59 1875.46 1212.75 635.79 898.53 16 ER2a ExonRegion 0 774.01 2374.39 1954.13 2481.80 1170.97 1233.18 2258.58 1325.15 1230.54 2381.83 2544.20 1052.12 856.78 2176.25 1680.75 1604.02 2021.41 2378.72 2733.59 2500.30 1730.29 1119.43 1129.51 17 E2a_E3a KnownJunction 0 1669.78 4289.50 2885.76 4759.13 2002.12 1749.28 3456.92 2086.52 1933.57 3418.51 4460.81 1858.36 1355.43 3622.95 2327.47 2378.35 3694.25 3217.07 4843.25 4473.31 2834.35 1765.12 1835.73 18 E3a_E4a KnownJunction 0 2073.18 2628.94 1717.24 2172.08 1474.45 889.15 1899.13 1141.24 873.02 2026.20 2860.15 1130.02 664.08 3137.87 2807.72 1565.32 2255.54 1465.00 2615.23 2349.72 1648.96 1313.15 1178.52 19 ER3a ExonRegion 0 1843.49 3456.92 3317.08 5027.23 1744.14 1347.54 2649.14 2412.71 2147.76 4173.16 4339.92 1504.31 921.79 3601.08 2499.91 2204.57 3373.93 3653.85 3990.46 3713.37 2622.87 1749.64 1689.67 20 ER4a ExonRegion 0 1639.47 2989.42 3474.48 4989.85 1507.26 1108.56 2269.67 2466.35 2119.34 4245.56 3865.04 1692.03 1161.14 3641.28 2996.64 2286.92 2996.11 3641.75 3695.79 3072.59 2348.29 1799.15 1605.54 21 E4a_E5a KnownJunction 0 1272.23 3222.45 3131.17 4367.38 1459.93 1173.98 2444.27 2142.30 1799.40 3564.50 3577.59 2361.02 1827.15 3674.40 3190.07 2405.61 2857.97 2997.20 4005.20 3263.23 2346.86 1822.62 1600.39 22 ER5a ExonRegion 0 1119.82 3596.98 3948.00 5366.02 3112.85 2442.53 4178.12 2824.77 2369.43 4489.14 4706.33 2297.32 1657.51 4051.91 3148.11 3016.48 3813.72 4293.57 5514.98 3970.11 2998.55 2259.96 2084.74 23 E5a_E6a KnownJunction 0 1058.48 5880.86 3841.47 6036.93 3890.24 3321.61 6337.88 2608.37 1999.86 3950.53 3738.84 2560.58 1428.48 4197.62 3445.96 3156.95 3171.48 3914.36 6035.19 3590.04 2668.23 2667.27 2154.65 24 E5a_E7a NovelJunction 0 2.74 24.40 35.19 26.07 12.82 17.94 27.65 16.27 23.38 26.03 32.80 12.60 6.66 36.73 8.90 20.34 12.90 52.23 28.99 26.33 18.72 21.98 12.04 25 ER6a ExonRegion 0 911.82 4026.84 4110.01 5901.30 2435.90 2735.68 4841.63 2480.24 2008.17 4014.89 3592.53 2668.10 1498.78 3703.16 3351.39 2838.36 3323.30 3717.32 4601.43 3382.40 2861.68 2346.67 1928.57 26 E6a_E7a KnownJunction 0 1462.56 4768.95 4968.22 6388.13 2801.95 2782.03 5933.35 3282.56 2575.32 5016.07 5176.26 3148.93 2033.31 4015.21 3306.76 3615.80 4062.27 6485.13 5749.15 4032.47 3610.08 1919.00 2532.38 27 ER7a ExonRegion 0 1620.45 5293.12 5380.34 7286.10 3025.75 3074.23 5650.25 3300.17 2719.27 5392.16 5248.70 2612.28 1723.90 4470.42 4209.38 4648.01 4153.50 7920.50 8723.20 3991.85 3541.00 3264.97 3022.33 28 E7a_E8a KnownJunction 0 1412.40 3699.87 2472.24 3261.09 1721.22 1653.08 3418.06 1542.04 1233.32 2414.46 2490.42 1011.48 911.14 2347.35 2586.08 2397.23 2290.60 3313.00 3219.95 1889.78 1757.13 1455.70 1437.86 29 E7a_E8b KnownJunction 0 1656.81 3794.78 3254.79 4603.18 2091.17 2187.43 4261.08 1599.59 1321.02 2731.81 2310.64 1220.20 965.68 2091.07 2393.11 2185.67 1953.34 3547.25 3384.00 2500.12 2000.72 1128.90 1407.64 30 E8_Ab NovelBoundary 0 512.16 1300.62 1158.68 1329.47 470.97 707.66 1415.86 693.78 540.65 1045.76 674.17 398.08 386.01 883.87 731.69 758.69 886.58 1239.58 914.94 799.35 680.66 441.06 467.28 31 ER8a ExonRegion 0 1146.18 3068.67 2269.29 2935.76 1450.05 1549.98 3044.70 1413.34 1171.36 2312.42 2416.72 1075.37 956.77 2363.59 2261.86 2211.72 2275.84 3359.35 2931.51 1832.07 1801.28 1304.12 1325.56 32 ER8b ExonRegion 0 1502.64 4539.97 5150.07 6335.43 2183.19 2779.44 4844.09 2932.51 2322.53 4770.78 3584.67 2075.75 1432.30 4166.52 3937.78 3188.37 3544.98 5728.25 5015.23 3557.35 2955.20 2016.09 2171.96 33 E8a_E9a KnownJunction 0 2695.37 5574.60 5226.31 7318.02 3057.98 4166.52 5715.18 3408.16 2676.42 5236.93 3182.91 1177.73 1166.64 2582.15 2652.83 4242.48 3211.78 7888.54 9338.62 3017.98 2776.15 3826.54 2872.90 34 E8a_E10a KnownJunction 0 715.46 1916.30 1669.13 1829.74 706.62 693.24 1687.24 857.54 600.05 1145.64 1338.81 702.83 411.50 1671.32 1728.67 1279.15 1092.19 1077.37 1923.91 1205.73 998.26 795.55 845.27 35 E8a_E11a KnownJunction 0 146.10 531.48 453.50 535.30 148.22 186.03 457.39 216.71 154.25 413.08 448.69 183.81 108.76 460.36 373.32 213.79 371.39 301.08 251.02 348.48 137.15 106.85 123.69 36 ER9a ExonRegion 0 1498.29 4078.07 3752.23 5299.48 1746.72 2207.14 3140.85 2203.89 1832.74 3445.35 2765.11 1212.34 1429.50 2859.08 2760.15 3374.61 2478.65 4968.96 6740.64 2619.03 2257.78 2224.30 2272.36 37 E9a_E10a KnownJunction 0 1286.82 4123.67 2999.10 4516.44 2003.57 2006.63 3365.02 1577.90 1366.02 2492.14 2332.54 931.50 1198.30 2797.77 2668.28 2665.88 2163.72 2676.35 4866.87 2547.04 1800.75 1652.63 1688.74 38 E9a_E11a NovelJunction 1 105.57 332.31 330.18 271.46 147.20 106.53 225.10 243.08 128.21 383.91 258.33 77.28 116.39 276.77 252.67 138.17 306.31 251.75 195.11 222.50 69.38 103.24 72.47 39 ER10a ExonRegion 0 1911.06 6256.31 5010.83 7039.53 2672.56 2588.10 4526.75 2888.12 2366.60 4254.88 4701.36 1430.58 1356.31 4343.51 4034.47 3272.52 3577.46 3659.38 5744.73 3453.23 3456.20 2220.34 2009.22 40 E10a_E11a KnownJunction 0 2957.26 8624.39 4892.70 7222.16 3577.17 2957.56 5560.22 2852.55 2302.38 3979.54 5327.14 1367.55 1256.90 3709.48 4096.43 2501.57 3998.31 3724.34 4744.61 3520.05 3890.74 1840.07 1566.50 41 ER11a ExonRegion 0 2475.40 8310.21 5690.67 7866.40 3634.58 3198.80 5984.23 2929.49 2382.27 4500.12 4842.04 1588.56 1627.83 3819.77 3923.45 2785.09 3882.44 4726.77 4555.07 3721.00 3495.20 1795.39 1687.56 42 E11a_E12a KnownJunction 0 1609.25 3687.44 2115.77 3265.92 2311.29 2211.96 3347.27 1519.08 1297.64 1812.86 2593.34 1481.73 1545.68 2966.93 3281.05 2029.72 1992.42 1040.98 2242.61 1363.67 1900.77 1145.25 990.98 43 E11a_E13a KnownJunction 0 1017.37 4963.39 3499.94 4563.16 2116.72 1189.77 4497.44 967.50 672.04 2083.12 888.65 340.46 360.85 927.13 937.76 707.68 611.03 4015.26 2955.00 2315.98 504.72 925.30 906.21 44 E11a_E13b NovelJunction 0 110.46 391.44 309.66 373.21 180.05 72.74 320.84 79.56 80.50 204.23 53.91 29.56 13.47 85.76 100.62 30.08 24.96 288.60 339.30 203.45 23.10 68.40 77.60 45 E12_Aa NovelBoundary 0 607.22 365.40 103.40 265.10 532.26 508.85 752.71 189.93 184.72 316.70 270.28 190.11 61.52 227.21 141.17 321.03 118.75 108.77 169.51 126.04 115.03 186.21 150.75 46 ER12a ExonRegion 0 1206.63 3226.87 2761.14 4693.64 2069.11 2012.66 3131.91 2057.08 1753.32 2436.50 2970.67 1429.50 1397.27 3037.02 3272.84 2304.01 2190.19 1845.05 2632.01 1418.60 1921.69 1297.66 1076.62 47 E12a_E13a KnownJunction 0 2211.73 4210.11 4038.86 5412.86 2870.97 2989.47 4412.12 2515.21 1987.74 3183.36 6133.66 1749.87 1629.11 4167.48 4278.15 4715.43 4561.47 3496.92 4547.14 2428.28 3194.14 2665.00 2338.69 48 E12a_E13b KnownJunction 0 331.24 596.93 561.69 931.55 440.49 513.74 701.83 358.99 274.68 372.47 777.62 228.22 285.37 625.17 644.54 634.71 459.75 296.81 739.22 392.77 436.27 425.94 317.29 49 I12 Intron 0 487.25 376.81 133.10 313.63 457.77 326.25 420.86 204.73 200.93 232.05 237.49 231.87 174.49 275.77 192.46 307.04 191.44 151.71 244.50 169.60 175.22 252.44 186.67 50 I12_AR1 ActiveIntronRegion 0 488.33 377.65 133.40 314.33 458.78 326.98 421.79 205.19 201.38 232.56 238.02 232.39 174.87 276.38 192.89 307.73 191.87 152.04 245.04 169.98 175.60 253.01 187.09 51 ER13a ExonRegion 0 2049.85 7499.84 6147.38 9170.51 4045.06 3278.37 6929.61 3255.98 2513.77 4690.84 4157.18 1512.07 1560.61 3731.82 3998.65 3333.24 3037.65 6183.96 6092.80 3586.69 2467.05 2243.95 2159.17 52 ER13b ExonRegion 0 2723.84 8525.27 6569.66 9641.34 6641.15 4838.83 9040.06 3723.95 2781.29 5156.84 5546.38 2047.17 2230.11 5172.82 5488.61 4429.95 4348.80 6198.42 7375.28 4313.98 3673.20 2959.36 2713.29 53 E13a_E14a KnownJunction 0 3029.13 9109.43 5943.85 8531.58 8388.54 5502.97 11035.77 3570.69 2577.87 4626.89 4823.54 2354.27 2674.50 5898.61 6055.27 4099.27 4196.07 4710.68 6285.26 4516.39 3841.63 2516.21 2522.65 54 ER14a ExonRegion 0 1989.97 6706.35 6294.31 8899.18 5940.69 3816.94 7313.85 3438.45 2489.14 4694.10 3892.44 1896.94 1621.76 3985.15 4311.96 3199.32 3055.31 4353.33 5648.40 3404.43 2501.26 2406.53 2212.48 55 E14a_E15a KnownJunction 0 2039.10 6736.37 6191.35 8428.60 5521.40 2758.13 5715.45 3062.19 2211.38 4411.81 3495.67 1418.86 1030.45 3701.71 3533.73 2098.85 2777.09 2916.83 3882.84 2719.68 2195.44 1841.96 1307.85 56 I14_SR5 SilentIntronRegion 0 264.25 63.10 62.78 71.46 230.84 59.13 212.98 48.51 31.46 50.82 24.06 37.39 28.52 11.96 57.79 83.74 52.28 65.45 74.99 34.99 26.98 48.03 71.19 57 ER15a ExonRegion 0 2123.04 6507.73 6254.93 8826.74 5380.16 2612.84 6111.94 4036.43 2646.32 5054.30 3373.54 2030.84 1533.20 2922.87 3129.44 2544.61 2531.65 2830.94 4707.62 2463.50 1460.95 2572.81 1777.52 58 E15_Da KnownBoundary 0 1245.85 3166.15 6649.62 10770.76 3962.99 1753.42 3601.25 4367.65 2764.70 5070.30 1451.68 942.61 660.83 1601.34 2295.08 1405.27 926.04 1827.35 1917.89 1312.28 328.84 1879.62 652.34 59 ER15b ExonRegion 0 442.44 609.38 304.09 461.12 766.29 348.56 775.66 234.28 157.90 240.95 170.60 183.88 128.66 158.46 182.91 174.02 137.19 108.14 268.59 117.69 70.36 256.27 132.86