Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RNF41 Gene 0 18.95 23.91 36.87 16.89 20.47 57.67 32.60 25.28 31.44 50.53 64.13 31.06 51.37 61.07 39.25 59.48 55.10 49.71 52.23 35.08 64.67 39.85 42.93 2 448057 Transcript 0 33.71 27.55 10.29 0.87 31.10 60.01 52.05 12.83 8.00 17.32 73.86 3.22 2.92 62.60 58.84 83.85 71.61 29.15 47.44 30.22 51.89 17.14 28.67 3 394013 Transcript 0 2.00 0.49 4.49 0.48 13.46 3.14 8.18 10.57 4.20 8.38 30.89 17.72 20.35 32.26 34.89 57.01 34.38 6.49 3.04 3.12 6.05 13.15 11.05 4 345093 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 352641 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 6.75 6.35 3.03 0.09 12.12 15.82 11.13 5.13 3.36 6.81 18.00 0.14 0.00 11.83 17.68 16.63 20.73 7.68 12.24 7.65 16.73 4.82 4.59 7 E1_Da NovelBoundary 0 21.26 16.64 9.34 4.76 27.25 117.77 115.62 11.13 15.48 19.90 30.17 0.00 0.00 74.22 33.87 36.06 21.69 29.06 30.97 20.90 19.58 22.72 25.78 8 E1a_E2a KnownJunction 0 60.68 48.74 17.56 1.66 50.08 104.20 92.96 20.54 12.64 27.83 129.72 6.30 5.84 113.37 100.01 151.07 122.49 50.61 82.64 52.80 87.04 29.45 52.75 9 E1a_E3a NovelJunction 0 3.78 0.00 3.67 0.00 0.00 0.00 0.00 2.34 0.00 1.37 2.42 0.00 0.00 2.47 9.77 8.72 13.18 0.00 0.00 0.00 3.15 3.12 0.00 10 ER1b ExonRegion 0 41.58 39.95 17.23 2.81 42.34 109.60 80.22 10.88 15.98 26.31 102.44 4.33 3.59 103.75 74.58 110.84 94.76 41.95 61.08 41.68 71.30 29.78 44.74 11 ER1c ExonRegion 0 22.36 31.44 16.57 10.34 29.45 108.67 53.39 7.51 18.74 29.23 34.74 0.00 3.57 30.28 15.85 37.93 41.92 29.40 71.53 26.19 47.73 36.09 45.36 12 E1b_E2a KnownJunction 0 0.00 0.00 21.82 5.79 0.00 18.57 4.42 17.21 19.88 23.18 44.27 0.00 6.82 16.60 10.01 11.45 71.25 0.00 12.99 18.73 52.76 11.14 7.94 13 ER2a ExonRegion 0 17.57 29.67 53.39 28.33 26.84 76.23 39.60 44.46 62.39 102.98 159.67 40.77 41.96 110.02 76.31 118.10 149.20 117.53 117.62 83.51 165.40 92.77 89.50 14 E2a_E3a KnownJunction 0 13.19 37.69 87.73 49.04 88.96 235.21 128.96 39.76 84.89 137.40 137.56 72.77 112.49 229.68 114.96 251.30 181.86 163.66 141.84 108.40 188.98 104.71 64.53 15 ER3a ExonRegion 0 14.05 63.53 93.45 48.79 72.32 212.23 122.96 71.57 88.33 157.90 190.21 87.24 91.43 159.21 100.82 212.15 137.59 144.32 120.76 118.13 196.54 117.95 112.53 16 E3a_E4a KnownJunction 0 0.00 0.00 1.36 0.00 15.79 2.84 11.35 7.68 5.24 6.69 17.32 18.91 13.64 16.19 34.12 47.68 34.78 0.00 0.00 2.56 5.68 8.45 10.93 17 E3a_E5a KnownJunction 0 44.82 84.85 96.27 59.70 80.65 161.10 107.40 78.62 99.97 182.31 184.15 75.92 170.28 107.72 120.16 115.61 136.04 143.47 100.71 93.06 212.39 128.77 101.75 18 E4_Aa NovelBoundary 0 11.71 12.56 10.59 3.30 7.56 7.04 18.11 7.11 8.42 5.48 5.11 5.85 14.12 8.71 8.90 7.09 16.55 10.28 0.00 6.14 2.66 0.00 0.00 19 ER4a ExonRegion 0 5.99 1.46 7.28 1.44 14.05 4.30 11.34 12.23 5.83 9.95 35.08 16.26 20.63 40.80 28.38 50.55 40.21 8.44 5.26 6.80 6.66 12.40 14.11 20 E4_Da NovelBoundary 0 10.45 0.00 3.19 9.36 11.12 0.00 9.72 8.54 5.18 6.02 2.58 11.85 20.29 0.00 0.00 0.00 8.88 0.00 4.80 14.76 2.59 3.12 0.00 21 E4a_E5a KnownJunction 0 0.00 0.00 4.85 0.00 10.53 2.27 1.85 11.79 1.53 8.52 40.27 18.01 26.78 39.79 42.15 72.80 28.14 11.03 3.86 0.00 5.81 18.61 8.11 22 I4 Intron 0 11.82 3.33 2.86 4.77 11.26 5.26 12.76 6.52 4.52 3.18 4.96 5.65 9.57 4.00 6.99 11.40 7.99 4.17 5.45 5.54 1.97 1.55 4.59 23 I4_SR1 SilentIntronRegion 0 12.69 3.80 3.17 5.21 12.79 6.06 14.32 7.27 5.12 3.56 5.46 6.28 9.65 4.33 7.58 12.01 8.75 4.51 5.54 5.82 1.82 1.63 4.98 24 E5_Aa NovelBoundary 0 3.48 3.16 6.09 3.73 23.17 7.61 18.50 5.96 3.50 9.78 9.95 0.00 8.28 7.36 8.90 18.37 4.77 14.47 0.00 9.14 10.63 0.00 11.27 25 ER5a ExonRegion 0 56.78 66.26 124.51 60.81 42.80 120.22 67.89 83.31 107.74 169.80 199.22 113.35 173.58 200.05 123.98 192.14 186.33 158.57 141.42 119.43 215.42 127.17 116.05 26 E5_Da NovelBoundary 0 21.49 2.83 8.57 6.66 19.44 11.07 14.00 17.99 16.67 9.16 20.95 0.00 7.95 28.49 30.41 57.08 21.41 18.28 22.49 17.39 26.32 15.25 8.37 27 E5a_E6a KnownJunction 0 59.94 100.90 109.93 67.06 59.76 186.65 84.44 115.91 118.40 171.14 236.59 111.34 170.28 253.75 131.03 254.04 203.83 187.08 224.48 162.22 245.81 150.45 159.63 28 I5 Intron 0 8.93 6.33 6.32 3.79 16.11 9.14 10.53 6.42 7.39 5.80 8.70 8.64 10.65 9.12 8.89 14.19 5.48 5.91 5.73 5.74 4.12 3.17 6.30 29 I5_AR1 ActiveIntronRegion 0 6.04 6.14 3.90 5.26 14.77 5.59 10.04 4.40 10.57 7.47 8.84 7.02 8.84 13.22 12.09 14.45 9.70 8.08 2.39 6.08 5.21 5.31 6.97 30 I5_AR2 ActiveIntronRegion 0 15.82 7.15 10.44 3.57 21.76 15.72 12.81 10.76 6.47 4.51 12.75 11.42 14.68 8.48 9.79 18.29 2.90 3.23 8.40 5.14 6.30 1.83 8.39 31 E6_Aa NovelBoundary 0 32.01 10.06 9.55 13.02 12.22 15.28 17.97 36.10 16.72 7.82 15.11 11.70 0.00 10.07 20.40 25.55 18.33 6.22 9.60 6.26 6.30 5.51 4.35 32 ER6a ExonRegion 0 50.27 85.54 119.85 51.82 70.14 206.17 112.58 84.35 96.34 166.57 226.68 104.19 177.29 187.97 131.32 173.48 168.66 163.96 160.63 102.96 218.75 96.39 142.06 33 E6_Da NovelBoundary 0 10.52 5.13 12.89 5.66 4.33 5.74 2.25 1.81 1.77 7.66 0.00 0.00 0.00 2.12 4.45 4.36 4.11 4.10 0.00 7.80 11.80 2.39 0.00 34 E6a_E7a KnownJunction 0 58.53 63.74 175.63 48.98 119.52 265.42 110.58 110.57 96.90 178.77 218.48 55.52 177.42 149.27 110.88 137.74 167.27 239.85 154.55 116.71 198.24 126.45 114.81 35 E7_Aa NovelBoundary 0 7.41 2.50 10.79 5.16 11.38 5.68 19.61 4.60 6.71 7.84 0.00 18.91 0.00 0.00 0.00 3.59 3.74 4.10 4.24 8.37 0.00 0.00 0.00 36 ER7a ExonRegion 0 78.35 59.11 139.40 69.18 79.27 206.32 105.38 97.14 109.30 185.79 259.70 98.70 226.74 228.44 169.08 247.72 199.64 192.40 217.00 116.94 214.37 167.58 188.79 37 E7_Da NovelBoundary 0 9.93 2.96 2.96 2.06 0.00 11.19 4.28 17.54 1.71 7.84 2.58 6.30 6.82 14.42 4.45 4.36 8.32 7.71 4.80 9.33 3.03 2.88 4.18 38 E7a_E8a KnownJunction 0 34.08 69.00 171.02 66.76 88.96 157.35 126.92 83.13 121.06 199.72 227.90 150.95 222.71 293.25 185.55 242.07 165.59 157.23 315.02 101.50 221.22 219.71 204.36 39 I7_AR1 ActiveIntronRegion 0 10.79 6.10 7.01 2.10 11.46 6.91 6.14 6.44 5.62 8.81 6.57 10.54 12.82 8.36 3.21 6.21 7.22 2.11 7.05 5.80 3.28 1.59 3.66 40 ER8a ExonRegion 0 10.87 12.28 16.53 6.47 8.94 25.96 15.35 10.13 12.61 18.52 19.72 13.84 26.23 24.27 14.02 18.35 16.56 17.93 21.34 12.00 21.57 14.76 16.76