Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CNPY2 Gene 0 148.20 167.37 300.41 186.60 177.21 265.19 174.87 192.22 141.23 185.00 195.85 101.00 124.28 261.59 426.17 236.35 180.88 207.92 255.58 176.91 248.97 264.99 234.01 2 273308 Transcript 0 175.71 209.60 469.69 278.95 240.50 352.38 223.57 289.97 207.96 277.33 292.91 127.34 151.37 367.44 621.14 309.54 254.66 296.12 355.73 237.11 352.19 390.48 327.51 3 ER1a ExonRegion 1 67.74 72.66 58.35 25.79 52.90 144.65 81.70 37.11 26.54 41.88 47.72 5.41 4.77 60.99 103.46 68.77 62.07 63.77 64.86 53.93 84.45 54.84 75.98 4 E1a_E2a KnownJunction 1 137.28 151.03 305.58 118.43 98.47 177.11 58.25 206.27 138.80 221.75 180.31 6.30 12.01 216.79 316.58 176.79 227.86 242.71 209.98 202.11 225.67 226.75 195.05 5 ER2a ExonRegion 1 104.12 150.68 333.08 141.50 101.63 210.03 115.56 198.97 146.76 223.91 200.82 29.96 32.21 306.28 543.18 335.01 253.64 274.89 288.49 229.82 271.21 305.95 305.25 6 E2a_E3a KnownJunction 1 73.64 235.55 460.86 252.12 276.83 467.69 368.18 306.78 235.07 296.61 308.66 56.57 38.80 446.94 765.19 410.49 335.02 418.51 406.79 246.72 445.17 405.49 408.04 7 I2 Intron 0 7.28 38.18 16.58 14.62 24.28 22.38 29.00 18.54 11.52 11.23 10.28 10.12 6.04 10.85 17.03 36.27 14.46 38.21 38.87 20.64 7.57 9.78 21.13 8 I2_AR1 ActiveIntronRegion 0 7.36 38.65 16.78 14.80 24.56 22.65 29.35 18.77 11.66 11.37 10.41 10.25 6.12 10.98 17.25 36.72 14.64 38.69 39.33 20.89 7.65 9.89 21.40 9 E3_Aa NovelBoundary 0 38.15 101.03 50.74 17.28 20.54 14.99 35.46 16.14 34.00 28.29 14.32 6.30 14.45 24.90 8.90 40.25 28.52 27.73 54.31 34.64 25.39 18.00 7.68 10 ER3a ExonRegion 0 153.54 285.91 495.26 288.14 341.90 606.26 392.83 321.30 223.26 310.17 325.88 96.74 117.53 462.71 763.10 456.55 298.96 419.20 480.47 274.83 439.56 429.04 422.90 11 E3_Da NovelBoundary 0 227.23 226.87 165.31 65.59 316.47 297.33 282.95 147.70 119.53 132.78 84.50 92.58 99.18 130.67 225.48 245.06 159.42 141.19 252.62 119.08 113.55 170.84 145.54 12 E3a_E4a KnownJunction 0 155.58 241.21 532.92 321.87 281.41 714.30 241.53 300.37 194.07 296.34 408.95 106.23 146.09 375.42 904.26 337.01 216.08 345.97 407.82 235.53 429.79 415.10 358.01 13 I3 Intron 0 48.21 72.44 56.07 34.13 96.25 49.91 73.63 51.81 51.40 39.34 29.39 50.38 42.39 70.54 85.76 74.04 43.95 33.38 80.47 56.40 26.07 47.46 41.18 14 I3_AR1 ActiveIntronRegion 0 62.37 118.38 91.57 52.28 146.44 83.38 112.91 82.71 80.36 67.84 49.28 73.92 63.07 104.76 125.97 119.77 72.27 50.85 114.94 85.99 45.85 74.18 60.40 15 I3_SR3 SilentIntronRegion 0 20.30 17.95 21.65 17.32 41.54 14.10 28.88 20.91 26.19 10.74 8.23 26.78 26.32 46.96 52.15 33.29 22.19 12.30 61.95 28.80 5.77 25.79 25.69 16 I3_AR4 ActiveIntronRegion 0 11.99 12.61 15.03 7.27 21.41 9.29 16.24 15.21 10.62 1.45 3.61 21.07 4.69 4.11 31.72 21.40 5.06 6.78 35.68 11.21 1.76 9.03 11.55 17 I3_AR5 ActiveIntronRegion 0 85.47 66.41 38.00 28.17 94.96 36.66 74.52 39.92 36.81 23.00 21.29 44.96 30.62 42.33 66.36 46.08 20.20 36.35 57.18 47.74 14.39 31.45 34.79 18 E4_Aa NovelBoundary 1 294.72 154.51 140.71 78.15 184.47 111.98 140.66 112.42 86.37 90.23 10.16 45.16 62.66 66.87 108.29 128.00 80.32 112.17 174.12 79.77 62.89 34.35 64.36 19 ER4a ExonRegion 0 290.49 305.32 647.99 432.21 312.45 443.88 281.83 418.94 298.44 381.64 423.42 250.39 316.05 558.51 906.41 440.36 346.21 414.77 480.96 356.07 510.01 518.64 446.95 20 E4_Da NovelBoundary 0 52.23 75.45 72.23 60.10 94.31 85.06 95.61 54.42 40.83 67.15 11.48 36.31 6.82 18.60 81.22 34.86 24.12 61.72 56.57 14.57 35.52 5.45 4.27 21 E4a_E5a KnownJunction 0 198.33 178.98 709.11 380.67 346.27 335.09 233.75 462.66 303.70 388.69 452.69 230.18 158.43 551.12 757.65 198.41 375.22 292.25 304.01 313.64 442.82 388.47 320.62 22 I4 Intron 0 35.29 47.20 22.69 31.87 27.99 17.97 26.84 34.52 21.06 40.79 12.64 24.15 15.96 31.95 45.92 54.41 21.58 59.48 70.81 34.08 24.50 19.75 34.56 23 I4_AR1 ActiveIntronRegion 0 40.61 54.61 29.22 37.26 33.37 22.29 28.96 40.62 26.29 47.17 14.12 25.86 19.11 32.99 51.17 58.59 25.98 68.57 74.00 39.28 25.00 20.62 38.31 24 I4_SR1 SilentIntronRegion 0 47.91 61.38 17.82 40.27 26.27 16.67 42.25 38.03 18.98 45.88 15.11 32.67 14.07 51.68 65.94 68.36 25.81 73.41 111.49 41.59 33.86 27.09 42.71 25 E5_Aa NovelBoundary 0 66.38 36.70 86.37 65.86 38.12 28.22 38.82 72.21 79.05 76.56 14.74 28.21 6.82 27.14 55.63 63.23 50.58 73.29 74.36 55.74 32.37 13.35 7.09 26 ER5a ExonRegion 0 243.40 226.15 586.21 397.23 311.52 271.86 249.51 380.08 298.57 347.75 414.22 224.02 245.91 478.80 724.72 359.44 297.22 315.66 427.43 307.52 427.13 511.13 393.69 27 E5_Da NovelBoundary 1 152.40 139.05 84.27 57.70 115.87 57.81 80.91 63.38 69.15 90.44 28.27 30.76 33.76 31.43 64.90 91.69 27.96 106.58 108.61 40.27 23.35 34.35 57.45 28 E5a_E6a KnownJunction 0 313.76 271.40 736.93 488.62 265.37 290.68 258.57 366.05 270.63 362.85 305.29 199.26 334.39 362.65 699.80 408.95 242.64 325.12 550.04 230.17 412.24 718.76 487.17 29 I5 Intron 0 36.38 70.48 35.50 33.20 49.01 31.52 35.81 38.10 35.01 41.66 15.25 24.29 33.19 20.90 33.06 43.55 18.60 33.28 45.33 50.95 14.59 19.96 23.17 30 I5_AR1 ActiveIntronRegion 0 36.58 70.87 35.70 33.38 49.28 31.69 36.00 38.29 35.19 41.87 15.33 24.43 33.38 21.01 33.23 43.79 18.71 33.46 45.58 51.24 14.67 20.07 23.30 31 E6_Aa NovelBoundary 0 86.83 220.88 68.12 60.30 12.05 23.91 45.00 29.24 52.23 62.91 9.63 18.46 36.20 16.66 32.76 33.75 25.34 40.83 22.40 44.55 14.58 5.88 4.35 32 ER6a ExonRegion 1 194.95 186.75 300.32 221.89 256.72 214.67 177.58 191.18 151.72 179.07 154.05 195.70 258.87 221.68 348.20 213.15 146.35 144.48 292.13 157.86 186.04 321.17 188.92 33 IG20 Intergenic 0 40.60 88.95 52.07 50.14 78.12 51.87 68.64 60.67 67.39 58.09 13.72 32.89 26.42 22.79 37.91 28.41 23.85 32.14 49.75 72.53 10.14 18.84 18.46 34 IG20_AR2 ActiveIntergenicRegion 0 47.03 98.55 66.21 66.39 91.00 71.65 80.30 87.22 94.21 79.90 20.09 45.69 46.30 34.75 51.42 36.30 36.89 47.82 66.10 101.21 15.98 19.77 25.43 35 IG20_SR2 SilentIntergenicRegion 0 23.45 40.41 30.27 31.35 57.43 55.31 58.50 44.43 50.43 51.49 16.92 21.93 6.66 32.93 46.25 38.44 19.21 54.86 39.42 64.49 8.89 12.11 25.03 36 IG20_AR1 ActiveIntergenicRegion 0 61.45 145.42 68.34 67.89 97.22 54.76 84.42 65.40 78.46 67.68 10.53 35.34 19.54 16.37 35.57 26.08 23.94 22.48 54.09 81.17 7.64 31.68 16.57 37 IG20_SR1 SilentIntergenicRegion 0 19.81 43.34 26.64 19.82 51.72 22.93 43.40 27.40 28.60 23.86 7.26 17.68 12.64 9.79 20.03 17.24 8.37 13.33 28.18 30.69 5.12 8.77 9.13