Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SUOX Gene 0 42.79 26.81 38.53 29.55 36.14 43.70 30.10 46.61 49.80 55.14 37.49 20.69 24.79 49.37 74.34 64.57 42.51 37.21 31.71 40.86 69.10 25.26 30.32 2 266971 Transcript 1 0.00 0.00 7.84 0.00 0.00 0.00 0.00 7.39 7.70 7.76 17.21 0.00 0.00 7.30 9.77 0.00 20.94 8.25 11.86 0.00 46.77 5.82 4.35 3 356124 Transcript 0 9.85 19.86 7.81 4.13 4.33 27.48 31.27 1.81 3.59 2.63 5.32 0.00 0.00 14.54 5.81 19.82 4.11 14.18 23.06 5.69 11.74 20.45 28.94 4 394115 Transcript 0 3.14 1.09 1.72 6.09 10.23 7.57 4.46 4.83 6.50 12.56 12.46 6.16 3.85 14.18 13.61 14.61 15.45 5.78 5.91 12.04 21.51 3.83 8.57 5 394109 Transcript 0 19.06 10.86 7.48 10.14 16.09 11.18 11.00 11.78 12.02 16.21 5.04 11.58 9.08 7.41 8.15 11.65 6.41 10.51 5.35 11.17 10.10 1.92 2.82 6 IG3 Intergenic 0 5.15 9.72 7.63 4.37 16.59 9.34 15.88 21.84 35.35 11.14 4.53 5.96 5.46 5.44 5.09 4.23 6.06 11.72 5.74 16.16 2.79 6.66 4.55 7 IG3_AR1 ActiveIntergenicRegion 0 8.99 13.30 8.36 7.64 36.30 17.09 27.92 38.74 69.20 17.04 6.32 14.82 6.58 4.12 5.05 5.83 4.32 13.70 10.93 19.82 1.44 14.30 8.64 8 IG3_AR2 ActiveIntergenicRegion 0 3.82 16.67 5.09 4.33 13.60 12.63 21.28 16.05 32.90 8.41 6.66 3.17 5.34 5.50 6.10 6.34 3.25 20.50 3.66 25.82 4.34 7.86 7.22 9 IG3_SR2 SilentIntergenicRegion 0 7.36 12.62 13.65 5.55 21.38 10.61 15.05 32.51 42.19 15.46 6.10 7.12 7.69 7.93 8.17 5.00 9.39 10.34 9.04 19.69 4.17 7.45 4.63 10 IG3_AR4 ActiveIntergenicRegion 0 1.81 0.00 2.45 1.56 5.35 0.00 3.97 6.91 10.94 4.59 0.00 0.00 0.00 4.18 0.00 0.00 13.20 9.24 0.00 4.26 0.31 0.00 0.00 11 ER1a ExonRegion 0 18.42 19.53 13.04 7.00 26.92 77.45 35.80 8.26 14.27 18.68 30.66 4.97 0.00 46.38 34.10 97.97 35.17 25.91 32.95 22.22 58.60 25.34 42.74 12 E1_Da NovelBoundary 0 44.97 0.00 1.77 2.06 4.33 0.00 1.99 7.31 8.04 4.35 7.37 0.00 0.00 17.42 4.45 11.62 4.77 13.35 19.11 5.88 0.00 0.00 8.11 13 E1a_E2a KnownJunction 0 32.60 46.18 21.23 12.25 44.65 125.67 49.42 20.95 23.73 37.45 51.07 0.00 0.00 58.86 76.15 214.82 80.69 50.95 84.24 33.62 83.21 37.41 71.11 14 E1a_E3a NovelJunction 0 2.96 0.00 4.32 2.03 0.00 8.63 0.00 0.00 0.00 1.48 0.00 0.00 0.00 0.00 13.35 3.93 0.00 0.00 12.61 9.52 0.00 0.00 8.71 15 E1a_E4b KnownJunction 0 9.85 19.86 7.81 4.13 4.33 27.48 31.27 1.81 3.59 2.63 5.32 0.00 0.00 14.54 5.81 19.82 4.11 14.18 23.06 5.69 11.74 20.45 28.94 16 E2_Aa NovelBoundary 0 0.00 0.00 9.96 11.39 4.16 0.00 3.93 8.34 23.47 13.65 2.68 0.00 0.00 17.25 4.94 11.79 7.95 21.14 8.94 36.94 5.00 2.33 18.69 17 ER2a ExonRegion 0 7.24 7.56 12.03 6.85 10.95 29.96 14.25 14.79 23.15 25.85 29.92 13.11 12.87 28.49 25.63 54.89 36.16 28.63 22.44 23.70 59.10 14.47 21.20 18 E2_Da NovelBoundary 1 0.00 0.00 6.59 2.06 4.16 0.00 2.12 11.58 11.49 9.00 5.21 5.40 0.00 9.12 9.64 0.00 21.22 5.51 21.46 12.27 18.47 2.69 3.24 19 E2a_E3a KnownJunction 0 0.00 0.00 0.00 3.66 3.57 2.21 4.11 1.52 0.00 3.52 14.69 6.30 0.00 14.95 0.00 6.84 13.37 2.32 3.86 2.94 20.70 3.12 4.35 20 E2a_E4b KnownJunction 0 0.00 0.00 7.84 0.00 0.00 0.00 0.00 7.39 7.70 7.76 17.21 0.00 0.00 7.30 9.77 0.00 20.94 8.25 11.86 0.00 46.77 5.82 4.35 21 I2 Intron 0 5.47 1.97 3.14 6.56 6.34 8.48 7.27 5.27 6.73 10.30 5.82 4.77 5.58 11.61 10.28 18.55 5.33 9.79 6.51 10.99 7.82 2.02 8.53 22 I2_SR1 SilentIntronRegion 0 5.48 1.97 3.15 6.57 6.35 8.50 7.28 5.28 6.75 10.32 5.83 4.78 5.59 11.64 10.30 18.59 5.34 9.81 6.53 11.01 7.84 2.02 8.55 23 E3_Aa NovelBoundary 0 18.30 13.29 10.26 8.69 27.25 0.00 20.01 11.01 11.43 13.51 2.68 0.00 6.82 16.66 18.42 16.32 9.35 21.31 4.80 18.60 26.44 8.88 3.59 24 ER3a ExonRegion 0 9.41 3.28 5.17 11.36 14.99 6.87 9.27 9.31 16.15 21.77 13.73 12.16 11.54 27.60 26.13 28.71 21.38 15.03 13.88 23.40 31.24 5.67 13.52 25 E3_Da NovelBoundary 1 46.38 41.83 101.39 44.52 94.99 71.66 49.06 86.71 62.62 59.96 40.22 12.30 13.96 22.90 34.74 15.38 51.24 101.48 48.75 103.74 62.58 27.07 18.44 26 E3a_E4b KnownJunction 0 0.00 0.00 0.00 3.26 12.14 13.63 0.00 3.66 3.36 12.38 8.95 0.00 0.00 0.00 14.71 8.29 11.59 0.00 0.00 9.78 12.60 2.69 7.85 27 E4_Aa NovelBoundary 0 45.93 26.71 12.92 23.81 38.37 21.92 10.60 13.10 30.18 23.34 6.00 26.26 6.82 14.54 10.01 20.17 7.76 9.04 8.66 20.90 13.47 5.51 4.18 28 ER4a ExonRegion 0 32.30 21.73 12.51 19.94 26.83 18.68 21.34 22.70 23.73 32.42 10.08 15.58 18.16 14.00 16.30 23.29 12.83 21.02 10.71 21.27 20.19 3.84 5.64 29 E4_Ab KnownBoundary 1 33.93 18.15 11.71 15.02 34.89 25.38 13.78 18.48 16.46 43.44 7.00 7.65 34.74 17.19 13.72 12.30 12.62 8.91 7.81 18.09 20.63 5.51 7.85 30 ER4b ExonRegion 0 28.59 21.16 36.55 25.73 36.05 53.34 28.86 34.92 41.53 66.38 44.59 18.42 25.36 49.71 59.99 56.62 62.33 42.31 37.79 40.50 78.92 32.91 36.33 31 E4_Da NovelBoundary 0 3.56 9.93 1.18 0.00 3.57 0.00 19.96 13.14 8.77 18.48 2.05 0.00 6.82 2.24 0.00 12.13 0.00 16.62 3.48 8.76 3.15 0.00 4.35 32 E4a_E5a KnownJunction 0 51.27 15.66 44.97 38.09 62.73 59.91 27.82 40.75 50.58 62.53 29.22 12.60 18.99 45.44 91.35 103.82 35.81 47.63 57.32 35.47 71.48 53.40 32.10 33 ER5a ExonRegion 0 49.67 23.20 29.22 27.68 35.36 58.51 32.77 42.16 47.03 50.75 45.94 20.36 44.63 66.31 86.48 86.54 42.65 31.78 44.33 46.35 92.31 35.40 46.23 34 E5a_E6a KnownJunction 0 37.78 58.02 31.46 34.39 25.04 62.52 33.03 38.73 55.32 47.14 27.53 24.61 32.79 60.27 70.59 55.46 44.97 40.75 13.37 56.63 94.83 28.96 47.38 35 E6_Aa NovelBoundary 0 14.22 6.25 3.58 3.36 11.80 19.02 12.19 7.02 5.38 9.94 2.42 0.00 5.84 2.47 12.36 15.38 13.00 6.67 9.41 0.00 5.00 5.45 7.68 36 ER6a ExonRegion 0 51.88 32.26 54.12 36.97 43.00 53.28 35.29 62.39 65.47 69.28 49.15 24.40 28.07 63.93 103.29 79.91 55.20 46.16 39.96 50.74 88.66 34.09 39.08 37 ER6b ExonRegion 0 5.82 0.00 2.45 0.34 5.35 3.67 0.66 0.86 0.31 0.00 0.00 7.58 0.00 0.81 0.00 0.00 0.00 0.00 0.00 1.06 0.00 0.00 0.00 38 IG4_SR3 SilentIntergenicRegion 0 6.55 25.61 5.17 11.97 13.46 6.22 23.07 7.40 11.39 11.33 3.26 6.70 0.00 0.08 1.63 3.06 3.46 7.25 5.67 15.86 1.24 4.00 1.88 39 IG4_AR3 ActiveIntergenicRegion 0 6.24 27.78 7.69 13.08 19.60 9.14 18.26 7.75 11.10 7.77 3.49 4.59 5.42 2.72 1.97 4.55 4.07 10.14 6.96 19.22 3.20 3.82 2.94 40 IG4_SR4 SilentIntergenicRegion 0 0.57 25.60 6.77 9.26 24.76 10.33 13.98 14.71 6.18 7.96 2.02 0.48 9.31 0.70 6.12 19.67 7.28 8.33 14.61 26.82 3.74 3.04 4.38 41 IG4_AR4 ActiveIntergenicRegion 0 3.70 24.60 4.82 9.99 19.64 10.88 11.47 11.95 9.16 10.91 6.45 3.87 4.72 3.66 6.38 12.93 6.79 20.95 8.21 15.00 3.71 6.02 7.50 42 IG4_AR5 ActiveIntergenicRegion 0 2.39 11.72 8.02 13.65 16.25 13.94 15.62 4.46 4.29 10.30 4.11 11.97 0.00 12.46 4.59 3.89 14.82 12.83 4.11 13.27 3.41 5.30 5.71 43 IG4_SR6 SilentIntergenicRegion 0 3.90 11.75 6.96 6.87 12.33 11.03 16.00 9.05 7.92 7.52 0.85 5.45 4.75 2.09 3.04 1.67 1.49 15.29 6.22 19.12 3.33 2.04 6.41 44 IG4_AR6 ActiveIntergenicRegion 0 3.13 7.82 5.89 8.09 10.54 6.96 8.79 12.56 4.15 11.93 6.96 12.37 15.65 5.52 4.26 1.55 13.71 7.13 5.62 9.68 5.91 8.31 3.45 45 IG4_SR7 SilentIntergenicRegion 0 6.90 14.70 14.42 10.37 13.69 9.14 14.16 8.69 11.06 13.63 3.86 3.57 2.67 2.94 2.73 4.68 4.96 20.01 9.93 18.36 5.40 6.08 6.65