Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RDH5 Gene 0 33.53 8.23 24.60 7.91 19.82 18.97 21.63 20.94 12.02 21.53 12.03 5.71 3.61 16.57 14.35 21.33 17.52 12.13 9.36 13.64 89.65 29.27 17.15 2 257895 Transcript 0 33.28 5.76 14.79 5.13 13.47 10.52 15.91 13.00 7.08 14.36 8.94 3.55 2.16 10.93 9.32 15.64 11.63 6.23 5.16 7.83 80.08 24.39 13.65 3 IG40 Intergenic 0 5.54 3.75 8.15 5.62 14.82 12.70 13.65 9.71 7.79 14.86 12.19 4.11 3.63 12.38 9.91 24.69 24.38 10.11 6.37 8.02 12.71 9.78 9.49 4 IG40_AR1 ActiveIntergenicRegion 0 5.55 3.77 8.17 5.64 14.86 12.74 13.69 9.74 7.81 14.90 12.23 4.13 3.64 12.42 9.94 24.77 24.45 10.14 6.39 8.04 12.75 9.81 9.52 5 ER1a ExonRegion 0 40.27 6.18 5.62 5.49 15.35 8.05 15.20 8.70 6.22 15.79 8.47 2.41 2.83 10.57 4.71 29.21 21.25 5.90 8.61 11.50 74.75 27.80 22.77 6 E1_Da NovelBoundary 0 23.56 9.80 9.05 3.53 13.75 18.80 25.84 22.14 5.24 18.91 14.16 0.00 0.00 12.07 23.98 3.25 22.53 12.97 12.24 8.82 18.41 5.02 19.46 7 E1a_E2a KnownJunction 0 3.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.03 3.12 0.00 8 I1 Intron 0 12.17 6.47 8.49 3.48 12.11 12.56 19.11 11.03 6.75 11.08 8.98 14.02 11.67 15.68 11.02 23.63 13.72 8.65 8.18 5.20 21.56 11.21 8.62 9 I1_AR1 ActiveIntronRegion 0 12.22 6.49 8.53 3.49 12.17 12.62 19.20 11.08 6.79 11.13 9.03 14.08 11.73 15.76 11.07 23.74 13.77 8.69 8.21 5.23 21.66 11.27 8.65 10 E2_Aa NovelBoundary 0 33.19 14.67 17.89 7.76 10.70 16.07 10.20 11.50 11.23 9.75 5.37 11.55 0.00 14.01 6.30 32.90 7.85 18.90 21.46 6.52 28.29 15.06 6.49 11 ER2a ExonRegion 0 10.60 4.55 12.21 3.66 11.73 6.70 11.85 4.20 5.14 5.54 6.88 2.81 2.45 10.58 10.72 14.14 8.88 6.58 4.28 4.44 70.49 16.63 5.24 12 E2_Da NovelBoundary 0 16.45 9.21 11.06 1.73 0.00 2.67 6.54 11.75 8.77 9.62 13.95 0.00 0.00 24.37 9.64 25.55 4.77 8.21 0.00 2.81 14.21 15.98 8.28 13 E2a_E3a KnownJunction 0 38.38 0.00 1.15 0.00 4.24 0.00 6.05 0.00 1.74 0.00 8.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 92.23 17.39 3.41 14 I2 Intron 0 5.56 3.21 6.24 3.74 2.11 2.89 5.22 7.45 4.84 10.33 8.64 0.00 1.02 11.95 8.39 10.16 12.15 8.46 9.21 6.15 25.47 10.41 6.18 15 I2_AR1 ActiveIntronRegion 0 5.62 3.24 6.31 3.78 2.13 2.92 5.28 7.52 4.89 10.44 8.73 0.00 1.03 12.07 8.48 10.26 12.28 8.55 9.31 6.22 25.73 10.52 6.24 16 E3_Aa NovelBoundary 0 3.19 2.57 11.80 4.13 16.89 13.23 6.62 10.72 4.66 17.35 4.90 0.00 6.82 19.78 9.89 12.82 4.77 4.19 0.00 3.26 28.36 24.80 0.00 17 ER3a ExonRegion 0 20.05 6.81 12.24 4.83 16.24 27.66 25.87 15.08 12.92 18.95 12.00 2.11 1.52 20.66 15.51 18.80 21.05 10.35 11.29 20.95 100.03 29.49 11.85 18 E3_Da NovelBoundary 0 7.48 18.94 29.30 7.13 27.67 5.17 16.30 24.03 30.67 15.55 9.53 7.65 6.82 7.18 28.80 14.61 0.00 21.89 21.84 20.45 45.16 8.63 15.19 19 E3a_E4a KnownJunction 0 19.11 0.00 5.94 3.00 0.00 0.00 6.32 2.55 1.62 7.79 2.58 0.00 0.00 7.24 0.00 7.69 4.77 0.00 0.00 0.00 87.29 19.35 16.39 20 I3 Intron 0 49.98 17.76 19.65 4.97 43.93 34.98 36.91 30.96 13.12 21.25 16.47 10.89 7.04 19.02 14.37 25.75 18.22 9.11 11.57 13.67 35.25 18.05 11.28 21 I3_AR1 ActiveIntronRegion 0 50.12 17.81 19.70 4.98 44.05 35.07 37.01 31.04 13.16 21.31 16.52 10.92 7.05 19.07 14.41 25.82 18.26 9.14 11.60 13.71 35.35 18.10 11.31 22 E4_Aa NovelBoundary 0 74.16 18.22 61.00 7.46 36.67 62.18 71.59 55.98 38.86 50.23 11.79 18.01 13.64 18.95 45.37 19.48 21.41 14.38 14.12 15.28 75.62 21.86 25.87 23 ER4a ExonRegion 0 50.86 9.49 30.91 9.52 32.22 28.48 34.08 29.24 12.71 29.32 16.16 17.98 8.41 19.66 15.48 33.27 19.87 13.93 9.91 17.86 123.81 39.09 20.81 24 E4_Da NovelBoundary 0 15.11 5.53 35.04 5.29 19.10 71.61 27.43 36.39 17.97 24.07 11.95 0.00 5.84 22.25 5.19 12.30 16.74 7.83 0.00 14.96 46.70 2.51 8.02 25 E4a_E5a KnownJunction 0 65.34 12.50 18.33 6.13 16.04 0.00 19.39 17.87 4.54 15.10 9.58 0.00 0.00 9.77 17.80 16.41 8.79 0.00 0.00 0.00 78.27 30.49 15.71 26 I4 Intron 0 15.48 8.39 23.97 8.76 16.05 28.87 26.82 22.22 18.64 25.64 7.25 5.49 2.79 12.22 15.90 12.26 10.52 12.23 10.75 21.54 30.56 11.33 12.11 27 I4_AR1 ActiveIntronRegion 0 15.59 8.45 24.14 8.82 16.17 29.08 27.02 22.37 18.77 25.83 7.30 5.53 2.81 12.30 16.02 12.34 10.60 12.32 10.83 21.69 30.79 11.41 12.20 28 E5_Aa NovelBoundary 1 23.49 18.94 46.95 14.65 35.48 43.61 41.56 52.57 50.98 53.13 17.43 6.30 6.82 11.48 44.38 29.48 9.26 32.79 29.37 42.06 47.38 13.72 27.49 29 ER5a ExonRegion 0 51.34 12.35 46.68 13.51 25.37 23.83 24.44 39.36 18.87 35.16 15.90 6.68 4.25 19.88 19.62 21.25 20.10 19.30 12.38 15.76 90.86 36.12 26.67 30 IG41 Intergenic 0 5.34 6.16 9.09 4.40 7.53 6.22 8.02 10.03 5.05 6.91 2.09 1.03 2.27 1.12 3.69 1.07 1.43 4.05 6.66 6.60 15.10 9.92 15.46 31 IG41_SR1 SilentIntergenicRegion 0 2.32 6.21 10.15 3.63 5.83 5.99 8.40 6.57 2.96 3.94 2.52 0.00 0.42 1.33 1.63 0.85 0.00 1.22 7.39 2.49 15.86 9.30 14.37 32 IG41_AR1 ActiveIntergenicRegion 0 12.16 10.94 16.41 5.25 15.27 12.92 12.04 15.07 8.89 7.54 3.69 0.97 4.11 1.34 6.70 0.54 0.32 4.22 9.93 9.10 21.60 17.44 19.16 33 IG41_SR2 SilentIntergenicRegion 0 3.44 4.52 6.31 4.77 4.97 3.60 6.69 9.73 4.43 8.24 1.24 1.01 2.39 0.88 3.24 1.45 2.88 5.32 5.93 7.19 13.22 7.10 14.21 34 IG41_AR2 ActiveIntergenicRegion 0 4.23 4.07 4.90 4.09 5.35 3.67 0.66 8.27 2.82 9.58 0.00 6.49 0.00 3.25 0.00 2.97 0.00 6.07 5.01 4.26 10.86 8.04 27.27