Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ITGA7 Gene 0 62.20 3.68 108.32 26.25 26.61 10.42 26.49 47.25 39.88 31.70 4.05 1.30 0.77 3.29 2.03 11.50 9.34 17.66 3.86 3.30 300.32 51.30 47.45 2 452168 Transcript 0 2.01 0.00 0.52 0.00 0.63 0.00 0.00 0.00 0.00 0.00 0.24 0.00 0.00 0.32 0.00 0.35 0.80 1.03 0.00 0.00 0.54 0.25 0.35 3 257880 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 394230 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 353687 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 257879 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 347027 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 394229 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ER1a ExonRegion 0 0.00 0.00 0.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.40 0.00 0.00 0.00 0.00 0.00 0.00 10 E1a_E2a KnownJunction 0 0.00 0.00 1.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER2a ExonRegion 0 11.91 0.00 0.88 0.00 3.79 0.00 0.00 0.00 0.00 0.00 1.29 0.00 0.00 1.89 0.00 2.11 4.40 5.39 0.00 0.00 3.12 1.48 2.08 12 E2a_E4a NovelJunction 0 18.97 0.00 6.50 0.00 0.00 0.00 0.00 4.60 0.00 1.42 5.37 0.00 5.84 2.30 4.45 0.00 12.34 0.00 0.00 0.00 0.00 2.82 0.00 13 E2a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER3a ExonRegion 0 8.99 1.14 33.10 7.32 3.52 4.01 5.10 10.97 17.62 13.72 0.00 0.00 0.00 0.00 0.00 0.84 0.40 10.07 3.70 0.76 138.37 16.96 22.02 15 E3a_E4a KnownJunction 0 6.96 6.12 35.01 14.12 11.29 2.50 12.10 22.59 26.94 23.64 0.00 0.00 0.00 0.00 0.00 4.27 0.00 5.97 4.71 0.00 196.14 12.31 15.88 16 ER4a ExonRegion 0 12.83 2.18 53.46 10.24 4.29 7.05 13.20 30.17 25.49 24.67 1.18 0.00 0.00 1.64 2.79 5.48 5.91 12.20 4.16 2.49 279.22 28.16 27.30 17 E4a_E5a KnownJunction 0 60.90 3.22 66.59 25.04 0.00 10.51 21.86 58.57 47.22 22.24 2.68 0.00 0.00 2.41 0.00 11.19 12.81 13.18 0.00 0.00 314.88 37.54 58.39 18 ER5a ExonRegion 0 55.32 2.08 77.66 29.06 11.14 6.76 29.43 47.10 51.07 28.49 1.98 0.00 1.76 4.61 0.00 12.19 9.49 25.78 2.03 5.64 374.82 45.99 63.47 19 E5a_E7a KnownJunction 0 49.12 0.00 94.97 40.42 22.92 2.67 14.49 43.21 43.55 28.98 6.63 0.00 6.82 4.83 0.00 4.36 0.00 31.01 0.00 2.56 306.11 64.66 55.74 20 ER6a ExonRegion 0 0.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.15 0.00 0.00 0.00 0.00 0.00 0.00 0.78 0.00 0.00 0.12 0.00 0.00 21 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER7a ExonRegion 0 39.92 2.81 102.39 27.66 20.77 9.15 23.12 53.01 44.33 36.80 3.84 1.42 1.06 2.80 1.97 9.22 7.89 22.74 1.90 5.99 389.90 58.69 50.32 23 E7_Da NovelBoundary 0 3.56 0.00 19.57 3.50 21.05 0.00 14.75 13.72 10.59 5.21 2.00 0.00 0.00 2.47 6.30 12.90 12.34 11.94 0.00 8.82 16.06 10.84 7.43 24 E7a_E8a KnownJunction 0 47.79 6.71 55.08 22.08 39.56 7.55 2.25 43.66 14.09 19.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 354.35 65.64 29.36 25 E7a_E9a KnownJunction 0 3.78 0.00 6.12 1.53 0.00 0.00 13.16 17.09 8.16 8.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.67 0.00 2.75 11.12 5.51 6.91 26 I7 Intron 0 6.41 0.62 17.52 3.28 6.76 1.48 5.21 14.05 6.51 9.32 4.10 0.36 1.95 2.15 0.71 9.91 6.00 7.89 2.25 1.07 13.34 6.94 13.05 27 I7_AR1 ActiveIntronRegion 0 6.95 0.77 21.06 3.66 8.11 1.85 5.59 15.72 7.12 10.45 4.88 0.45 2.44 2.54 0.88 12.38 7.26 9.70 2.81 1.31 13.60 7.96 15.20 28 ER8a ExonRegion 0 33.48 4.01 48.62 17.44 12.16 5.88 8.01 23.19 14.50 13.88 1.49 3.94 2.98 1.66 0.00 4.62 8.93 5.63 0.00 2.47 281.94 46.78 38.20 29 E8_Da NovelBoundary 0 34.38 2.50 64.96 12.75 38.79 10.05 31.49 23.08 25.32 24.55 0.00 0.00 0.00 4.77 0.00 0.00 4.11 6.26 0.00 0.00 139.25 15.74 6.49 30 E8a_E9a KnownJunction 0 6.08 0.00 6.21 3.86 3.57 0.00 5.70 7.43 3.01 4.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42.26 8.27 3.59 31 E8a_E10a KnownJunction 0 15.63 0.00 12.89 7.03 0.00 5.74 1.90 13.27 11.69 4.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 230.37 22.72 14.17 32 E9_Aa NovelBoundary 0 75.05 5.79 52.19 21.21 54.33 14.25 42.09 13.47 15.36 11.79 0.00 0.00 0.00 0.00 0.00 3.85 8.23 6.47 0.00 0.00 110.15 40.90 24.50 33 ER9a ExonRegion 0 22.26 1.95 40.00 13.36 18.33 2.81 27.68 37.54 20.59 21.06 3.12 1.70 4.53 4.17 0.87 3.17 8.25 11.64 1.35 4.33 107.03 22.31 34.29 34 E9_Da NovelBoundary 0 23.63 0.00 22.06 5.53 16.89 5.00 42.88 9.98 8.19 4.84 0.00 0.00 0.00 0.00 0.00 0.00 7.76 4.56 8.85 0.00 68.33 17.45 12.29 35 E9a_E10a KnownJunction 0 20.30 2.89 21.29 6.19 15.37 2.90 12.19 11.79 15.19 19.02 0.00 0.00 0.00 4.83 0.00 11.54 0.00 5.39 0.00 5.43 38.43 13.72 20.23 36 I9 Intron 0 13.35 0.73 23.04 6.16 10.99 2.95 8.75 10.88 11.61 7.83 2.42 0.52 0.43 0.84 0.53 3.89 3.54 4.26 1.90 0.13 59.27 11.04 11.53 37 I9_AR1 ActiveIntronRegion 0 19.50 0.47 19.25 8.65 13.34 1.34 8.92 13.24 16.20 8.62 0.45 0.00 0.76 1.95 0.58 3.41 5.31 8.50 1.42 0.49 61.96 7.50 8.33 38 I9_SR1 SilentIntronRegion 0 14.02 0.00 27.03 10.05 9.53 1.83 4.47 7.13 23.00 13.69 1.93 0.00 0.00 1.62 2.90 0.00 6.40 5.66 1.59 0.00 60.19 5.86 9.54 39 I9_AR2 ActiveIntronRegion 0 11.94 0.93 26.90 5.73 10.78 3.93 9.50 11.22 10.71 8.19 3.47 0.79 0.35 0.47 0.50 4.61 3.13 3.00 2.30 0.00 63.12 13.77 13.83 40 E10_Aa NovelBoundary 0 31.86 2.63 33.23 5.33 8.15 5.34 8.08 15.28 6.02 12.09 0.00 0.00 0.00 0.00 0.00 4.10 11.97 0.00 0.00 0.00 42.87 8.08 12.38 41 ER10a ExonRegion 0 20.53 1.72 62.04 11.70 12.18 8.80 22.97 36.05 27.19 23.22 4.58 2.52 1.65 3.15 0.71 8.19 3.06 7.52 5.96 2.08 282.69 39.34 42.31 42 E10a_E11a KnownJunction 0 54.16 3.09 67.15 13.72 11.21 8.06 26.98 34.26 34.35 23.85 9.27 0.00 0.00 2.47 0.00 7.69 13.37 6.96 4.52 0.00 232.28 56.95 57.96 43 ER11a ExonRegion 0 37.30 4.41 96.51 18.54 19.12 8.74 27.24 44.57 40.11 27.83 2.74 0.00 0.12 5.61 1.42 15.40 7.59 14.22 6.22 1.68 306.15 48.31 53.80 44 E11a_E12a KnownJunction 0 55.19 0.00 155.05 19.54 36.59 15.16 43.50 56.07 48.26 43.87 4.05 0.00 0.00 4.65 6.30 3.76 4.77 30.14 9.60 0.00 336.62 60.25 65.13 45 ER12a ExonRegion 0 53.91 1.99 120.21 21.76 33.76 8.10 41.53 56.18 50.82 40.55 1.63 2.04 0.00 4.93 2.09 10.49 6.49 22.21 2.00 2.13 363.46 65.10 65.89 46 E12a_E13a KnownJunction 0 72.83 3.22 142.31 32.53 26.40 8.01 40.28 77.38 83.16 48.97 4.26 0.00 0.00 0.00 0.00 15.89 27.30 31.17 0.00 6.07 398.83 60.01 70.42 47 ER13a ExonRegion 0 36.92 6.12 132.68 27.49 22.97 10.90 29.08 57.82 62.62 42.57 4.41 0.95 0.00 5.33 3.76 14.05 6.24 27.20 6.07 7.03 397.92 56.29 67.91 48 E13a_E14a KnownJunction 0 47.93 6.31 153.69 28.80 31.41 16.30 32.64 62.68 72.19 62.27 4.32 6.30 0.00 5.00 6.30 17.35 19.92 13.56 11.29 5.37 387.90 65.70 89.20 49 ER14a ExonRegion 0 46.14 3.35 153.96 31.67 24.36 10.81 25.07 76.38 62.97 37.79 3.20 0.72 0.00 6.72 3.08 16.56 12.14 27.35 7.47 5.65 427.63 67.74 64.88 50 E14a_E15a KnownJunction 0 41.04 6.45 185.09 56.77 30.39 20.78 25.44 101.58 62.18 52.06 2.42 5.70 0.00 8.06 4.45 8.29 8.13 20.40 12.71 5.24 373.32 70.48 52.93 51 ER15a ExonRegion 0 43.18 5.87 138.76 44.65 44.80 28.07 32.57 85.42 51.22 42.34 1.50 3.07 0.00 4.61 4.35 16.73 16.13 21.58 5.81 12.70 382.38 67.58 80.95 52 E15a_E16a KnownJunction 0 40.90 9.47 109.19 32.36 43.80 20.95 32.02 60.63 47.22 33.07 2.26 0.00 0.00 7.53 15.95 15.30 21.22 17.99 4.80 14.64 391.79 81.56 58.22 53 ER16a ExonRegion 0 59.72 5.26 146.01 29.24 27.18 12.76 28.88 64.40 56.56 46.73 5.63 1.63 0.00 6.48 5.00 14.80 16.57 21.86 10.98 2.91 381.55 59.33 68.04 54 E16_Da KnownBoundary 0 97.35 6.31 166.64 39.66 35.57 15.62 56.31 101.00 47.42 40.43 6.16 0.00 0.00 10.07 11.50 8.29 16.92 27.82 4.80 0.00 348.73 60.56 56.34 55 E16a_E19b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 ER16b ExonRegion 0 61.32 8.13 122.32 37.45 26.37 7.79 31.43 68.96 50.57 41.39 5.55 0.69 1.36 4.43 2.35 6.81 15.83 26.22 1.43 10.36 394.82 67.85 64.56 57 E16b_E17a KnownJunction 0 99.87 15.92 104.05 35.49 49.24 13.69 20.14 48.26 66.98 45.96 7.79 6.30 6.82 7.95 4.57 12.22 11.97 26.65 0.00 3.26 459.50 102.57 116.78 58 ER17a ExonRegion 0 63.88 5.94 134.16 32.98 30.04 18.26 27.77 65.91 53.79 38.57 9.12 2.11 2.00 4.16 4.70 9.59 13.67 22.88 4.33 2.87 407.14 69.27 63.88 59 E17a_E18a KnownJunction 0 80.68 0.00 113.57 48.71 27.08 13.00 29.28 66.13 45.63 23.85 2.26 0.00 0.00 0.00 0.00 4.19 20.20 40.46 0.00 3.26 396.92 55.78 91.34 60 ER18a ExonRegion 0 54.26 1.86 110.44 33.85 32.43 7.84 33.10 47.04 49.26 31.63 5.62 1.57 1.70 2.65 1.55 8.25 8.37 26.17 1.40 1.27 385.86 56.45 70.81 61 E18_Da NovelBoundary 0 7.56 0.00 15.97 5.93 16.30 5.62 12.01 15.73 12.70 2.74 2.68 0.00 0.00 2.47 0.00 0.00 3.65 1.95 0.00 2.68 33.11 9.06 12.12 62 E18a_E19a KnownJunction 0 57.86 0.00 63.30 12.95 23.85 4.60 29.15 46.45 32.12 20.84 7.84 0.00 0.00 2.30 4.45 15.81 8.51 2.03 0.00 0.00 333.72 40.84 72.81 63 I18 Intron 0 51.98 0.88 27.70 5.87 19.33 7.68 19.13 11.54 9.04 7.65 1.12 0.00 0.00 1.52 0.64 3.44 8.11 6.77 0.92 0.92 72.90 8.13 6.36 64 I18_AR1 ActiveIntronRegion 0 52.26 0.89 27.86 5.90 19.44 7.73 19.23 11.60 9.09 7.70 1.12 0.00 0.00 1.53 0.64 3.45 8.15 6.81 0.93 0.93 73.31 8.17 6.40 65 E19_Aa NovelBoundary 0 191.89 0.00 70.75 16.58 45.93 18.00 34.80 26.08 26.45 14.21 0.00 0.00 0.00 0.00 0.00 0.00 7.95 16.87 0.00 2.62 124.17 23.70 16.13 66 ER19a ExonRegion 0 100.47 2.79 140.28 30.93 38.24 19.72 34.24 65.82 43.40 34.89 7.20 0.00 1.10 3.03 3.42 10.71 7.25 23.55 1.82 4.07 415.17 64.01 64.85 67 E19a_E20a KnownJunction 0 85.87 12.23 112.50 31.30 38.37 14.54 33.17 54.71 45.20 37.55 9.58 0.00 0.00 0.00 4.45 15.72 0.00 18.03 4.80 0.00 336.69 81.38 62.66 68 ER19b ExonRegion 0 57.45 8.13 93.65 26.19 26.57 11.66 30.26 48.03 40.32 33.34 9.80 0.00 0.00 0.00 3.73 16.56 3.54 23.89 5.92 3.04 323.16 71.73 50.76 69 ER20a ExonRegion 0 99.97 7.41 148.78 36.83 59.92 14.74 46.14 64.72 48.76 44.28 7.64 0.00 0.00 6.10 2.65 17.54 11.86 21.37 2.79 3.94 409.16 80.64 78.60 70 E20a_E21a KnownJunction 0 98.24 8.88 232.13 58.63 70.63 21.86 67.26 75.21 70.05 64.36 7.05 5.70 0.00 11.89 0.00 30.08 21.60 26.57 0.00 5.94 421.63 93.93 83.57 71 ER21a ExonRegion 0 100.27 6.41 192.70 49.83 51.47 18.68 45.40 78.60 65.68 59.19 7.08 0.00 0.00 2.23 2.43 12.07 19.10 23.10 4.10 3.78 430.77 75.16 54.77 72 E21a_E22a KnownJunction 0 124.17 3.22 237.57 60.00 21.99 34.30 28.97 87.82 82.09 49.21 9.58 0.00 0.00 0.00 0.00 23.33 15.90 21.85 0.00 3.20 446.40 61.78 33.46 73 ER22a ExonRegion 0 110.85 2.77 155.18 34.27 32.43 14.99 31.32 53.05 48.10 38.96 5.90 0.00 0.00 4.27 2.71 16.41 21.92 23.01 3.53 1.93 380.80 67.03 51.88 74 E22a_E23a KnownJunction 0 205.07 3.22 165.46 48.08 43.46 7.67 44.30 84.33 51.19 48.57 4.74 0.00 0.00 2.94 0.00 28.03 17.95 26.65 4.80 0.00 437.94 93.56 56.17 75 ER23a ExonRegion 0 139.42 3.83 188.08 46.42 55.59 8.90 42.15 66.70 50.63 41.99 6.34 1.77 0.00 4.97 0.06 17.54 11.18 23.75 5.44 3.95 449.90 64.99 47.53 76 E23a_E24a KnownJunction 0 162.84 12.89 194.82 57.30 73.60 8.18 58.87 58.12 53.18 40.78 14.74 0.00 0.00 0.00 0.00 36.06 4.39 43.44 0.00 6.14 411.93 68.34 64.11 77 ER24a ExonRegion 0 129.96 9.74 149.05 36.81 48.25 18.75 45.67 52.02 40.35 45.05 5.70 1.03 0.00 4.60 1.87 20.05 8.26 25.53 7.34 4.52 382.62 65.22 54.78 78 E24a_E25a KnownJunction 0 161.51 3.16 160.22 38.42 48.30 27.37 50.30 62.39 46.56 41.80 2.32 0.00 0.00 4.47 0.00 16.92 3.83 30.34 0.00 11.70 395.87 47.03 46.52 79 ER25a ExonRegion 0 134.62 3.85 140.43 30.61 47.39 14.92 43.71 61.91 39.64 45.71 9.69 1.38 0.00 3.01 1.58 24.43 9.73 30.66 5.19 4.29 338.37 55.72 46.81 80 E25a_E26a KnownJunction 0 214.26 6.71 172.41 42.85 72.58 23.23 64.21 90.20 34.40 58.16 10.42 0.00 0.00 2.47 0.00 36.23 15.99 29.89 3.95 5.75 386.97 95.59 72.73 81 E26_Aa NovelBoundary 0 0.00 0.00 2.81 0.00 7.98 0.00 0.00 1.85 7.52 1.07 0.00 0.00 0.00 0.00 0.00 15.30 0.00 0.00 0.00 0.00 2.35 0.00 0.00 82 ER26a ExonRegion 0 124.65 8.87 168.05 40.81 46.33 19.77 50.10 72.26 58.55 45.38 5.19 2.28 0.00 4.69 5.60 17.70 9.29 20.20 1.12 0.58 317.53 61.85 47.60 83 E26a_E27a KnownJunction 0 145.66 5.79 194.17 50.61 68.68 26.41 58.52 70.93 68.17 40.64 1.95 6.30 0.00 2.47 6.18 12.13 17.67 32.42 0.00 0.00 372.76 94.30 42.68 84 ER27a ExonRegion 0 170.41 5.44 234.66 56.29 60.81 26.75 45.60 94.91 79.08 52.49 6.33 2.89 0.00 6.32 5.22 25.19 15.40 41.42 1.64 4.69 396.27 86.12 66.42 85 E27a_E28a KnownJunction 0 199.52 11.77 311.46 79.61 56.54 30.44 43.46 126.34 74.42 47.63 2.68 6.45 0.00 9.54 8.90 39.14 8.04 36.31 0.00 2.88 436.89 77.28 75.20 86 ER28a ExonRegion 0 119.67 5.79 208.71 52.14 31.41 13.43 35.65 73.83 49.46 35.53 4.59 2.89 0.00 4.86 2.81 17.57 17.26 21.97 1.24 4.20 328.02 60.36 37.66 87 E28a_E29a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 88 E28a_E30a KnownJunction 0 223.37 13.68 225.89 47.48 63.16 24.08 66.11 69.87 53.79 28.90 4.84 0.00 0.00 4.94 4.45 40.67 21.13 21.97 0.00 9.08 326.99 82.67 58.56 89 I28_AR1 ActiveIntronRegion 0 5.03 0.00 2.45 0.00 6.02 0.00 4.47 1.73 4.01 1.86 0.00 0.00 0.00 0.00 0.00 6.50 13.20 0.00 0.00 0.00 28.65 0.00 0.00 90 ER29a ExonRegion 0 0.00 0.92 0.86 1.83 2.42 0.00 3.59 1.16 0.02 0.04 0.00 1.38 1.49 0.00 0.00 1.34 4.53 0.00 0.00 0.00 3.10 0.00 2.65 91 E29a_E30a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 92 E30_Aa NovelBoundary 0 9.48 2.83 8.46 3.63 4.33 0.00 6.18 0.00 0.00 1.48 0.00 0.00 6.66 0.00 0.00 0.00 12.90 0.00 0.00 0.00 22.30 0.00 0.00 93 ER30a ExonRegion 0 76.37 3.12 123.00 30.09 32.58 8.77 26.11 46.34 45.03 34.42 4.17 1.93 1.13 2.81 2.36 15.25 13.98 12.89 5.35 3.23 271.57 64.38 49.68