Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IKZF4 Gene 0 29.27 50.75 26.44 21.94 58.16 48.86 49.93 61.47 81.28 58.99 32.66 17.00 20.10 27.36 16.90 24.30 26.13 68.14 46.83 58.31 40.81 41.47 37.41 2 262032 Transcript 0 0.89 6.81 3.44 3.84 6.83 11.62 9.73 10.57 19.53 13.21 4.74 4.95 3.24 4.93 1.00 3.42 1.79 14.34 21.23 19.25 5.80 2.96 10.00 3 431367 Transcript 0 0.57 3.45 1.37 3.10 2.31 2.58 1.84 12.33 4.35 9.72 3.28 3.89 0.08 1.68 2.11 3.27 2.07 6.58 1.84 8.94 3.85 3.85 10.75 4 IG4_SR3 SilentIntergenicRegion 0 6.55 25.61 5.17 11.97 13.46 6.22 23.07 7.40 11.39 11.33 3.26 6.70 0.00 0.08 1.63 3.06 3.46 7.25 5.67 15.86 1.24 4.00 1.88 5 IG4_AR3 ActiveIntergenicRegion 0 6.24 27.78 7.69 13.08 19.60 9.14 18.26 7.75 11.10 7.77 3.49 4.59 5.42 2.72 1.97 4.55 4.07 10.14 6.96 19.22 3.20 3.82 2.94 6 IG4_SR4 SilentIntergenicRegion 0 0.57 25.60 6.77 9.26 24.76 10.33 13.98 14.71 6.18 7.96 2.02 0.48 9.31 0.70 6.12 19.67 7.28 8.33 14.61 26.82 3.74 3.04 4.38 7 IG4_AR4 ActiveIntergenicRegion 0 3.70 24.60 4.82 9.99 19.64 10.88 11.47 11.95 9.16 10.91 6.45 3.87 4.72 3.66 6.38 12.93 6.79 20.95 8.21 15.00 3.71 6.02 7.50 8 IG4_AR5 ActiveIntergenicRegion 0 2.39 11.72 8.02 13.65 16.25 13.94 15.62 4.46 4.29 10.30 4.11 11.97 0.00 12.46 4.59 3.89 14.82 12.83 4.11 13.27 3.41 5.30 5.71 9 IG4_SR6 SilentIntergenicRegion 0 3.90 11.75 6.96 6.87 12.33 11.03 16.00 9.05 7.92 7.52 0.85 5.45 4.75 2.09 3.04 1.67 1.49 15.29 6.22 19.12 3.33 2.04 6.41 10 IG4_AR6 ActiveIntergenicRegion 0 3.13 7.82 5.89 8.09 10.54 6.96 8.79 12.56 4.15 11.93 6.96 12.37 15.65 5.52 4.26 1.55 13.71 7.13 5.62 9.68 5.91 8.31 3.45 11 IG4_SR7 SilentIntergenicRegion 0 6.90 14.70 14.42 10.37 13.69 9.14 14.16 8.69 11.06 13.63 3.86 3.57 2.67 2.94 2.73 4.68 4.96 20.01 9.93 18.36 5.40 6.08 6.65 12 ER1a ExonRegion 0 2.40 3.83 5.27 2.78 4.92 11.11 7.83 6.49 6.79 6.38 2.30 1.13 3.05 3.28 1.62 2.47 1.49 14.60 16.79 19.26 7.32 3.52 6.70 13 E1_Da NovelBoundary 0 3.04 18.09 4.17 7.13 6.79 17.66 4.11 0.00 7.12 4.75 0.00 0.00 0.00 0.00 0.00 7.78 0.00 30.26 3.86 17.51 5.44 8.14 11.87 14 E1a_E2a KnownJunction 0 0.00 5.72 1.54 1.40 4.16 7.89 1.94 7.15 24.31 12.95 2.26 0.00 0.00 0.00 0.00 0.00 0.00 7.83 29.74 17.39 0.00 3.12 12.80 15 E1a_E3b NovelJunction 0 0.00 2.50 3.22 0.00 4.33 0.00 1.90 4.89 2.60 4.38 2.58 0.00 0.00 2.47 0.00 0.00 0.00 18.03 7.91 11.70 2.41 2.76 0.00 16 I1 Intron 0 2.73 10.30 2.03 5.65 9.71 8.59 9.57 9.95 14.76 8.46 3.11 2.87 3.43 3.10 2.22 3.74 3.00 14.34 4.38 12.33 4.78 5.06 5.93 17 I1_AR1 ActiveIntronRegion 0 1.15 2.17 3.24 2.82 0.00 4.76 4.87 6.12 8.27 7.08 3.57 2.27 7.71 3.47 1.67 0.00 0.00 15.97 3.02 9.41 3.17 5.33 5.57 18 I1_SR2 SilentIntronRegion 0 2.90 11.67 2.03 6.34 11.08 8.96 10.46 11.10 16.49 9.27 3.43 3.09 3.51 3.25 2.35 4.24 3.25 14.77 4.74 13.43 5.22 5.50 6.41 19 E2_Aa NovelBoundary 0 0.00 14.54 0.00 15.45 28.61 4.77 9.14 20.17 24.39 10.77 0.00 7.65 0.00 9.54 0.00 4.19 0.00 4.02 0.00 11.06 0.00 5.57 16.13 20 ER2a ExonRegion 0 1.15 17.67 4.34 5.97 11.10 10.63 16.44 11.22 32.38 20.14 9.09 1.11 9.93 9.02 2.38 7.02 1.19 20.25 20.67 37.35 13.34 5.21 12.06 21 E2_Da NovelBoundary 0 10.67 28.42 2.84 4.76 16.55 20.50 21.82 20.58 15.48 13.38 2.68 0.00 12.66 2.12 0.00 3.16 4.77 6.59 4.80 36.43 8.22 6.25 11.78 22 E2a_E3b KnownJunction 0 0.00 0.00 2.60 5.23 7.13 16.87 12.72 17.42 14.67 13.38 5.32 17.56 0.00 7.42 0.00 4.19 4.49 14.67 17.69 3.00 2.53 0.00 8.45 23 I2 Intron 0 5.27 12.07 2.32 6.78 15.32 11.66 16.42 16.52 22.44 13.95 3.38 9.29 8.61 4.75 3.18 3.78 4.90 8.57 3.55 16.47 4.67 10.38 6.23 24 I2_AR1 ActiveIntronRegion 0 5.55 12.46 2.97 7.39 18.46 14.36 17.85 18.94 23.70 14.80 3.15 12.76 14.27 5.39 2.04 2.16 4.92 4.76 3.57 18.45 1.86 10.60 3.69 25 I2_AR2 ActiveIntronRegion 1 10.94 24.74 4.90 13.63 14.27 22.31 27.14 35.15 47.96 26.95 3.87 8.66 13.29 3.25 2.90 0.00 19.26 3.70 3.19 31.91 6.61 5.21 11.75 26 I2_SR1 SilentIntronRegion 0 6.65 13.74 2.60 8.88 8.15 10.96 19.19 13.57 22.25 9.82 1.53 5.95 5.09 3.64 3.79 1.81 6.06 3.09 1.34 10.67 4.42 9.93 6.40 27 I2_AR3 ActiveIntronRegion 0 4.25 10.68 1.22 4.98 13.54 7.78 13.11 13.79 20.24 14.08 4.44 5.53 1.56 4.29 4.64 7.04 4.15 16.46 4.39 15.53 8.91 10.40 9.82 28 E3_Aa NovelBoundary 0 13.71 12.56 4.61 8.69 10.95 20.56 7.99 29.16 37.56 24.52 4.53 6.00 0.00 0.00 6.30 7.86 9.07 24.46 8.47 12.21 17.67 7.59 12.55 29 ER3a ExonRegion 0 0.57 3.45 1.37 3.10 2.31 2.58 1.84 12.33 4.35 9.72 3.28 3.89 0.08 1.68 2.11 3.27 2.07 6.58 1.84 8.94 3.85 3.85 10.75 30 E3_Ab KnownBoundary 0 3.41 8.68 2.75 12.55 8.40 10.79 4.11 25.71 16.58 22.21 7.05 18.91 0.00 2.30 0.00 8.37 4.39 21.60 4.80 12.72 0.00 6.12 16.82 31 ER3b ExonRegion 0 1.79 14.27 5.68 9.61 8.70 17.72 14.74 32.21 48.45 30.79 21.35 10.41 3.97 21.38 4.66 14.77 12.76 41.24 21.13 34.70 21.38 17.11 31.06 32 E3a_E4a KnownJunction 0 6.52 9.67 5.38 11.55 16.64 7.72 27.60 30.72 54.34 36.53 27.80 12.60 0.00 34.38 4.45 22.99 21.97 66.86 21.93 30.10 28.23 23.27 15.37 33 ER4a ExonRegion 1 2.91 10.82 8.39 9.84 17.25 22.89 21.49 41.46 66.06 37.64 27.29 7.78 3.25 29.18 7.16 22.80 28.91 94.27 32.37 55.09 50.23 25.99 37.35 34 E4a_E5a KnownJunction 0 0.00 19.08 10.47 17.21 15.53 26.58 19.70 36.15 92.22 40.40 38.17 23.26 6.82 42.32 4.94 15.98 37.21 94.97 49.51 71.40 45.90 19.84 23.30 35 ER5a ExonRegion 0 7.33 13.55 8.99 13.51 17.12 27.17 22.49 45.27 91.15 53.69 34.55 7.11 9.30 30.81 10.43 23.64 35.76 120.86 43.97 71.18 51.08 22.55 33.23 36 E5a_E6a KnownJunction 0 3.78 18.02 10.73 15.48 26.99 49.69 12.45 47.44 88.83 60.09 45.96 18.91 12.34 26.02 0.00 43.49 34.22 130.62 61.84 59.95 53.75 36.86 34.91 37 ER6a ExonRegion 0 4.56 24.58 7.86 17.26 26.06 41.62 28.33 53.03 92.37 58.63 54.06 13.31 17.82 40.71 14.12 32.48 35.41 109.50 73.96 83.40 60.57 47.34 35.51 38 E6a_E7a KnownJunction 0 6.30 31.84 13.99 9.82 35.31 72.00 38.91 52.25 100.35 53.46 52.38 7.05 25.81 26.72 19.66 27.69 37.03 70.43 34.73 65.71 67.28 33.86 15.45 39 ER7a ExonRegion 0 9.03 25.93 11.19 19.42 25.78 38.90 27.11 66.10 123.66 70.33 47.27 21.35 16.20 33.45 19.56 44.81 33.61 146.81 82.24 90.22 71.84 52.75 52.53 40 E7a_E8a KnownJunction 0 0.00 9.47 20.46 18.35 7.47 48.95 12.28 84.61 144.67 99.34 57.65 25.36 6.66 57.33 14.09 23.16 30.11 133.02 141.46 109.75 78.95 50.76 44.22 41 ER8a ExonRegion 0 40.22 67.65 34.84 27.75 77.70 61.25 64.52 76.08 96.28 71.94 38.24 21.59 25.90 31.57 21.43 28.22 30.55 71.98 52.94 64.63 45.52 51.48 43.72