Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CDK2 Gene 0 109.45 68.80 98.70 32.34 109.83 50.15 195.88 64.43 27.92 80.54 271.33 129.51 70.24 371.75 164.65 278.61 301.42 99.54 42.92 55.01 42.01 119.86 95.09 2 266970 Transcript 0 88.71 78.35 93.45 35.07 94.82 43.03 224.73 65.45 31.87 95.70 300.96 135.36 97.26 441.05 168.13 374.97 322.25 146.79 36.91 60.83 70.02 125.92 120.56 3 440311 Transcript 0 0.00 0.00 0.00 3.60 8.06 0.00 6.14 0.00 2.55 1.48 0.00 12.15 0.00 4.71 0.00 11.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 354056 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 1 26.32 21.06 32.37 6.72 22.55 28.05 71.01 23.48 14.08 39.28 142.70 23.18 13.34 251.14 69.10 198.38 220.76 87.77 26.19 34.55 33.95 59.23 66.79 6 E1a_E2a KnownJunction 1 3.41 24.60 55.05 17.05 42.02 46.62 147.15 42.88 15.68 62.16 187.42 30.01 21.26 263.58 65.76 144.15 198.69 82.49 52.90 38.73 45.22 158.41 63.85 7 E1a_E3a KnownJunction 0 0.00 0.00 0.00 3.60 8.06 0.00 6.14 0.00 2.55 1.48 0.00 12.15 0.00 4.71 0.00 11.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 I1 Intron 0 26.50 5.21 10.78 4.48 21.13 9.65 29.10 11.54 10.74 13.01 34.23 12.59 15.27 67.31 20.93 70.61 50.01 22.08 12.23 9.08 8.93 20.75 25.48 9 I1_AR1 ActiveIntronRegion 0 27.35 5.41 11.31 4.49 22.17 10.02 30.09 12.10 11.22 13.72 35.84 13.20 15.73 70.26 21.81 72.93 52.16 23.69 12.81 9.25 9.43 20.31 25.82 10 I1_AR2 ActiveIntronRegion 0 25.63 4.07 7.49 8.03 12.49 11.41 22.36 6.15 6.45 8.28 24.05 7.70 14.59 44.21 17.41 60.76 37.78 0.21 6.37 10.64 2.69 38.20 26.43 11 I1_SR1 SilentIntronRegion 0 14.66 2.64 3.54 4.95 6.84 4.14 16.28 4.55 4.94 2.93 12.53 4.33 10.25 29.23 9.78 42.38 20.54 0.00 4.25 7.56 2.20 28.01 24.36 12 E2_Aa NovelBoundary 0 111.35 49.40 24.63 16.28 66.13 50.37 135.09 38.03 8.62 18.59 100.24 18.61 25.32 151.86 80.47 200.89 109.68 55.17 17.22 31.77 22.05 80.03 67.10 13 ER2a ExonRegion 1 43.36 55.14 68.07 18.36 84.59 56.47 234.66 49.59 27.28 85.99 362.67 100.35 31.03 308.71 103.14 242.84 351.46 113.87 49.94 52.24 48.40 111.33 67.54 14 E2a_E3a KnownJunction 0 107.95 77.95 86.93 36.66 78.69 46.85 346.24 54.59 36.11 99.79 415.26 151.55 61.68 407.27 148.59 297.96 417.95 125.02 33.13 80.73 59.43 98.46 54.03 15 ER3a ExonRegion 0 99.13 57.49 122.82 40.53 98.63 45.59 166.60 100.14 43.69 105.71 482.70 161.98 86.75 510.86 144.22 455.72 501.74 169.11 102.54 78.07 64.71 213.69 146.08 16 E3a_E4a KnownJunction 0 85.27 43.15 130.54 51.61 75.98 31.91 116.72 92.21 39.03 112.52 342.93 130.09 77.92 537.76 213.61 482.78 391.58 180.32 60.24 73.82 64.19 158.41 170.38 17 ER4a ExonRegion 0 81.36 56.49 100.52 41.47 102.01 53.53 219.63 74.29 34.41 101.96 355.05 185.23 100.41 489.45 168.29 374.14 412.94 155.12 51.26 72.18 65.35 147.04 123.79 18 E4a_E5a KnownJunction 0 100.09 69.99 117.86 32.80 109.68 35.89 291.30 66.95 25.35 88.40 285.65 167.45 124.50 463.48 129.92 337.43 290.70 122.16 26.45 52.09 64.06 123.14 116.09 19 E4a_E6a KnownJunction 0 0.00 0.00 3.25 0.00 0.00 0.00 5.74 8.75 3.36 6.98 9.11 6.30 0.00 13.54 5.19 35.03 16.83 13.76 4.05 6.14 0.00 11.33 7.43 20 ER5a ExonRegion 0 74.31 64.28 77.16 27.24 99.40 46.53 194.13 56.55 36.06 84.85 315.48 115.88 93.89 455.69 159.37 316.65 337.86 133.00 40.69 57.84 74.28 100.99 110.47 21 E5a_E6a KnownJunction 0 91.72 100.77 85.33 45.18 75.38 46.68 188.75 72.87 34.20 113.84 301.76 122.74 73.37 403.97 215.09 470.82 338.20 185.21 43.58 72.55 71.72 153.63 135.13 22 ER6a ExonRegion 0 99.68 61.16 131.07 40.19 77.85 50.61 174.32 79.13 46.89 114.26 354.86 136.44 80.40 496.46 191.28 426.27 466.12 181.80 55.79 67.56 71.04 160.90 148.69 23 E6a_E7a KnownJunction 0 276.72 102.35 193.22 51.91 136.08 80.12 437.25 82.19 62.90 138.80 599.36 173.01 133.92 599.04 272.33 795.69 729.12 182.73 90.45 112.24 88.90 212.97 243.11 24 I6 Intron 0 9.09 9.12 22.86 3.79 13.50 4.45 12.37 6.74 1.72 8.30 15.53 3.47 4.33 17.20 12.24 18.32 17.88 14.76 5.36 11.92 2.88 7.01 5.49 25 I6_SR1 SilentIntronRegion 0 9.16 9.18 23.02 3.82 13.60 4.49 12.46 6.79 1.73 8.36 15.64 3.50 4.36 17.33 12.33 18.46 18.01 14.87 5.40 12.00 2.90 7.06 5.52 26 E7_Aa NovelBoundary 0 46.60 21.18 11.89 5.49 10.44 13.80 52.16 6.24 4.14 14.59 22.16 13.80 27.92 31.61 24.85 57.93 39.08 12.60 3.86 32.66 2.35 3.00 4.35 27 ER7a ExonRegion 0 146.04 87.36 113.11 37.49 143.98 56.15 231.65 70.31 25.70 80.64 252.97 150.39 79.37 353.14 192.79 246.36 256.96 71.72 38.42 54.11 31.21 119.55 86.02