Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CALCOCO1 Gene 0 300.12 164.02 195.08 241.25 262.53 336.09 136.58 258.44 308.44 103.24 62.78 42.31 77.56 64.51 128.82 100.86 70.24 122.47 159.95 103.44 357.05 250.25 218.50 2 430117 Transcript 0 81.27 35.32 53.28 32.70 38.79 107.04 50.17 68.51 103.15 27.51 22.16 12.30 13.64 9.65 10.63 10.51 18.98 44.02 23.53 32.28 111.20 66.07 42.60 3 262059 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 454332 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 342760 Transcript 0 22.47 6.05 2.12 6.07 24.80 31.37 8.06 6.79 11.03 4.28 6.03 5.19 5.62 5.53 10.27 5.61 8.02 7.50 14.19 10.39 33.99 28.59 14.66 6 443834 Transcript 0 0.00 0.00 0.00 1.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 413257 Transcript 0 0.14 0.00 0.00 0.27 0.00 0.00 0.00 0.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1a ExonRegion 0 141.95 62.28 32.35 49.55 156.69 308.55 124.64 46.70 74.13 32.74 31.91 0.83 3.36 32.92 70.67 50.92 53.86 69.24 121.28 63.95 205.44 140.08 180.41 9 E1a_E2a KnownJunction 1 1019.88 346.39 178.14 282.55 967.66 1663.98 684.17 281.19 417.82 173.02 165.83 6.30 19.48 160.99 310.03 298.04 303.69 340.95 625.90 321.31 1071.40 920.71 1027.26 10 ER2a ExonRegion 1 104.25 38.05 100.58 130.69 111.67 175.80 73.13 166.44 248.69 96.73 72.90 17.53 14.12 43.47 74.50 77.34 108.64 128.89 183.71 112.35 446.63 248.34 232.55 11 E2a_E3a KnownJunction 1 26.75 35.78 120.81 195.35 31.41 46.00 18.59 239.54 326.18 130.93 59.80 24.76 34.09 113.84 294.83 189.18 42.08 195.70 437.75 200.96 253.90 833.63 563.23 12 E2a_E4a NovelJunction 0 0.00 0.00 5.88 13.85 0.00 0.00 0.00 0.00 4.63 1.13 0.00 0.00 0.00 0.00 0.00 4.36 4.02 1.74 16.57 3.26 8.59 8.21 7.26 13 ER3a ExonRegion 1 24.36 41.14 101.30 147.04 182.65 224.68 56.97 191.68 255.23 87.87 43.73 31.57 43.97 54.61 112.73 126.78 41.16 167.99 195.87 114.03 253.68 267.82 365.18 14 E3_Da NovelBoundary 0 12.00 22.69 43.26 52.97 127.25 201.19 41.82 51.38 96.93 37.42 16.64 10.80 30.84 17.84 27.07 22.73 24.87 48.42 36.61 38.99 115.83 39.50 46.27 15 E3a_E4b KnownJunction 0 0.00 0.00 0.00 1.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E3b_E4a KnownJunction 1 40.53 63.61 100.44 100.39 428.69 609.42 204.39 107.12 196.76 57.62 62.33 36.91 27.11 38.85 39.56 93.91 24.50 57.87 33.60 56.18 312.47 100.36 96.29 17 E3b_E4c KnownJunction 0 81.27 35.32 53.28 32.70 38.79 107.04 50.17 68.51 103.15 27.51 22.16 12.30 13.64 9.65 10.63 10.51 18.98 44.02 23.53 32.28 111.20 66.07 42.60 18 E3b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER3b ExonRegion 0 33.56 48.81 87.53 95.99 341.73 541.49 180.82 101.73 193.03 64.06 63.51 38.35 44.89 38.75 53.88 76.85 38.20 73.65 44.60 63.22 303.80 102.09 103.62 20 I3_AR1 ActiveIntronRegion 0 23.17 17.58 21.05 25.16 32.38 31.18 33.19 17.80 24.93 4.92 1.11 6.24 17.89 7.74 11.26 4.28 5.71 4.77 13.77 17.17 9.50 5.40 11.00 21 ER4a ExonRegion 0 53.48 66.12 99.61 102.23 186.53 390.22 145.38 135.62 207.25 73.30 35.37 30.17 21.58 44.39 70.44 54.74 45.25 73.19 47.68 74.19 267.45 127.25 108.40 22 E4_Ab KnownBoundary 0 109.13 59.92 36.10 51.74 83.96 140.71 55.12 88.47 113.42 30.60 15.42 6.00 6.33 25.60 15.95 24.87 25.25 69.23 68.05 60.02 187.68 101.28 96.63 23 E4_Ac KnownBoundary 0 102.39 65.38 67.74 32.80 46.86 149.80 75.25 80.42 128.07 34.01 26.27 20.26 20.45 28.67 24.97 20.59 22.81 58.16 40.57 52.92 165.56 102.50 72.05 24 ER4b ExonRegion 0 143.92 94.42 98.55 88.20 107.79 234.99 86.62 169.64 224.79 64.23 39.49 42.06 46.23 60.79 75.85 51.80 47.63 104.27 84.64 85.11 312.93 166.98 149.35 25 ER4c ExonRegion 0 172.90 68.40 123.86 117.81 81.18 214.45 76.09 169.71 225.71 85.12 53.12 21.12 40.97 60.77 80.63 90.54 47.77 120.92 99.20 74.16 368.67 158.28 170.39 26 E4a_E6a KnownJunction 0 282.05 50.85 143.25 136.41 154.84 283.98 106.21 177.73 223.78 91.25 52.64 24.91 32.63 45.74 73.43 115.78 65.92 108.15 88.19 57.85 401.49 160.98 191.04 27 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER5a ExonRegion 0 0.42 0.00 0.00 0.82 0.00 0.00 0.00 0.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER6a ExonRegion 0 130.78 63.86 122.15 126.69 142.79 213.44 80.99 179.74 242.96 100.45 55.37 15.03 29.97 59.61 103.90 79.61 66.79 121.93 116.10 95.37 381.21 185.21 181.44 30 E6a_E7a KnownJunction 0 94.61 65.65 129.68 171.54 198.56 204.83 110.32 193.09 272.77 110.19 62.02 12.60 54.38 62.39 72.81 129.03 55.26 125.27 132.24 110.00 422.68 193.56 228.77 31 ER7a ExonRegion 0 98.65 67.34 160.01 166.41 162.27 296.68 115.35 229.00 294.30 114.78 74.73 22.87 78.03 73.04 125.01 100.41 73.53 163.46 138.77 126.72 403.16 223.47 214.37 32 E7a_E8a KnownJunction 0 143.21 81.76 173.09 166.45 198.05 384.78 145.96 258.40 292.73 116.96 65.28 27.16 113.63 60.57 139.19 88.01 58.81 110.10 189.18 148.61 433.43 233.67 183.02 33 ER8a ExonRegion 0 90.13 62.68 161.14 177.94 176.19 353.30 118.21 251.23 314.82 115.89 73.77 43.39 75.35 66.11 98.74 98.31 68.48 135.19 162.84 131.45 413.89 211.58 233.19 34 E8a_E9a KnownJunction 0 133.80 103.14 176.40 190.29 219.78 331.63 143.35 294.62 340.74 144.76 87.50 26.41 93.99 100.83 162.93 131.08 60.59 169.13 160.57 161.58 424.66 274.14 290.23 35 E8a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 ER9a ExonRegion 0 122.76 75.39 143.26 155.17 163.87 301.80 110.80 234.86 307.16 109.71 66.80 47.12 78.56 78.60 121.89 107.66 64.37 165.27 133.05 108.32 377.03 186.66 229.08 37 E9a_E10a KnownJunction 0 102.61 46.11 135.21 137.98 122.50 168.94 95.97 148.56 205.61 84.21 48.01 25.66 25.16 55.68 97.66 44.60 43.95 86.06 76.33 74.66 286.46 142.74 107.90 38 E10_Aa NovelBoundary 1 24.89 0.00 7.18 15.95 7.22 29.53 21.95 14.70 15.39 9.19 0.00 37.81 0.00 2.30 4.45 0.00 8.88 3.48 4.71 0.00 16.74 6.25 15.37 39 ER10a ExonRegion 0 106.34 68.47 126.11 133.71 150.03 269.24 94.31 165.87 224.87 79.36 36.90 26.69 51.85 53.95 113.27 73.45 52.24 99.60 89.42 80.82 297.38 174.58 147.80 40 E10a_E11a KnownJunction 0 167.14 103.73 212.80 211.46 158.40 274.78 137.21 236.50 333.97 97.56 60.02 29.56 47.72 85.94 149.45 65.37 59.47 140.03 118.40 115.24 348.55 194.78 195.99 41 ER11a ExonRegion 0 151.99 92.03 208.98 241.46 197.39 356.16 118.99 248.57 318.83 101.20 73.31 42.30 87.81 69.46 124.41 79.42 77.94 154.26 144.81 121.99 384.18 235.35 240.20 42 E11a_E12a KnownJunction 1 206.33 121.36 215.22 221.88 231.32 404.43 137.04 258.81 330.12 114.06 73.60 11.40 88.31 76.93 141.67 104.16 88.92 135.97 91.67 83.92 392.66 221.30 240.04 43 ER12a ExonRegion 0 141.94 84.39 207.00 216.61 196.08 380.00 131.87 248.32 349.60 107.58 70.05 48.53 53.10 75.17 125.27 106.04 71.04 163.08 166.70 114.07 384.23 240.30 246.68 44 E12a_E13a KnownJunction 0 250.93 97.81 237.40 228.61 274.36 435.83 134.61 298.69 386.02 131.92 93.02 47.27 79.38 91.12 140.68 113.13 98.46 210.87 239.16 157.68 487.73 320.31 346.15 45 ER13a ExonRegion 0 132.02 68.21 166.32 152.14 154.56 270.80 107.12 216.96 282.86 101.94 60.84 23.28 33.35 68.33 111.90 91.65 65.84 128.04 135.83 95.92 369.45 231.04 220.92 46 E13_Da NovelBoundary 0 82.98 27.03 78.18 123.13 111.55 213.57 54.45 115.66 182.55 61.00 23.64 5.85 0.00 29.20 68.36 42.21 8.79 52.31 101.09 31.19 136.40 165.94 113.62 47 E13a_E14a KnownJunction 0 67.86 60.52 92.72 81.01 92.02 87.28 69.87 121.78 204.16 41.05 42.80 10.95 0.00 41.09 71.82 52.21 21.22 89.95 75.67 37.78 252.61 102.75 78.79 48 I13 Intron 0 101.88 19.22 61.39 65.18 77.05 188.24 38.14 87.79 110.86 31.18 21.67 9.24 12.55 23.02 41.04 32.67 28.30 48.25 60.22 33.21 110.42 99.39 102.64 49 I13_AR1 ActiveIntronRegion 1 102.73 19.38 61.90 65.75 77.71 189.86 38.46 88.55 111.81 31.45 21.86 9.32 12.66 23.21 41.40 32.95 28.55 48.66 60.74 33.49 111.36 100.25 103.51 50 E14_Aa NovelBoundary 0 136.84 33.22 83.73 95.89 110.70 218.96 41.60 112.99 139.38 33.15 21.85 11.10 6.82 21.96 65.89 46.48 12.16 57.74 56.19 31.00 117.01 52.11 92.02 51 ER14a ExonRegion 0 148.04 82.96 163.69 123.38 152.13 334.85 116.54 191.03 242.29 85.93 54.48 15.76 32.99 54.94 92.25 78.94 60.59 114.34 114.51 87.77 330.21 160.68 176.18 52 E14a_E15a KnownJunction 0 183.14 108.99 186.07 150.96 345.67 496.59 206.20 196.17 280.81 83.54 41.01 44.26 50.65 80.11 115.09 100.74 52.73 118.43 122.07 112.37 319.20 185.11 196.51 53 E14a_E15b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 ER15a ExonRegion 0 130.17 89.99 165.73 134.93 295.00 413.52 189.00 186.24 250.73 85.73 49.29 33.55 31.66 70.65 123.30 85.45 59.42 106.71 109.90 97.87 318.99 151.58 196.02 55 ER15b ExonRegion 0 160.86 91.35 174.54 175.28 210.14 305.03 149.21 228.81 267.22 88.18 51.70 21.77 32.83 56.67 128.05 90.38 63.52 120.84 145.23 102.23 298.59 227.49 198.69 56 E15_Da NovelBoundary 0 139.88 41.83 96.15 133.35 90.07 194.94 52.91 134.56 173.75 51.36 19.90 12.60 61.03 53.21 77.38 43.07 21.69 90.37 142.97 59.32 143.20 88.60 97.06 57 E15a_E16a KnownJunction 0 10.82 0.00 0.00 5.43 8.66 12.61 0.00 2.22 7.70 0.00 0.00 0.00 0.00 2.77 0.00 0.00 4.30 7.01 0.00 0.00 8.15 16.47 0.00 58 E15a_E17a KnownJunction 0 162.70 84.06 167.14 156.86 79.46 164.68 97.82 205.04 179.89 72.31 38.17 0.00 19.48 35.67 108.66 95.53 56.10 61.85 170.55 69.16 229.38 218.42 188.74 59 I15 Intron 0 105.38 39.35 69.20 108.49 103.56 206.99 43.50 112.67 153.97 39.28 27.27 16.12 19.02 33.39 57.35 43.14 32.60 56.85 84.12 47.18 132.35 131.04 110.70 60 I15_AR1 ActiveIntronRegion 0 106.17 39.65 69.74 109.32 104.36 208.56 43.83 113.52 155.19 39.58 27.48 16.25 19.17 33.65 57.77 43.48 32.86 57.29 84.75 47.55 133.36 132.05 111.57 61 E16_Aa NovelBoundary 0 207.15 46.37 81.13 147.40 190.49 279.10 67.57 130.00 164.76 53.97 20.69 18.16 18.83 42.03 59.95 39.14 20.57 73.12 120.94 57.33 146.84 116.83 117.80 62 ER16a ExonRegion 0 49.91 15.20 3.95 10.71 57.75 81.50 24.18 11.79 18.49 6.20 15.41 9.26 16.87 13.83 21.92 16.84 19.76 13.37 33.62 25.74 79.24 58.77 33.73 63 E16_Da NovelBoundary 0 138.10 45.39 77.02 120.20 62.22 228.68 61.21 146.76 152.81 59.18 21.48 31.21 6.82 26.43 49.69 51.10 34.60 71.30 37.84 29.66 160.13 147.63 84.34 64 E16a_E17a KnownJunction 0 6.67 2.96 2.42 2.06 7.98 0.00 0.00 6.37 6.89 6.63 2.68 6.30 0.00 0.00 8.90 0.00 0.00 2.11 8.94 5.43 14.58 10.53 10.24 65 I16 Intron 0 193.40 51.14 71.45 104.06 134.79 247.48 67.63 102.00 150.79 45.25 24.91 15.93 19.76 29.91 55.39 39.00 25.78 60.19 79.36 61.98 139.03 113.59 98.41 66 I16_AR1 ActiveIntronRegion 0 194.00 51.30 71.67 104.37 135.21 248.22 67.83 102.31 151.25 45.39 24.99 15.97 19.82 30.01 55.56 39.12 25.85 60.38 79.60 62.17 139.45 113.93 98.70 67 E17_Aa NovelBoundary 0 238.26 58.94 148.84 232.50 155.26 217.15 48.80 235.72 249.22 63.80 35.75 6.30 32.47 28.08 90.36 34.44 34.41 123.95 179.39 102.84 136.71 217.62 214.35 68 ER17a ExonRegion 0 687.70 369.77 326.27 455.68 489.41 453.95 207.36 415.28 441.76 134.56 79.24 77.69 148.37 79.94 188.58 139.21 84.67 122.45 230.75 118.52 399.40 371.13 263.27 69 ER17b ExonRegion 0 6.35 6.10 0.00 1.36 8.03 3.67 1.32 0.00 0.00 0.00 1.93 0.00 9.38 0.00 0.00 0.00 0.00 0.00 0.00 2.13 2.20 2.08 2.94 70 IG34_SR4 SilentIntergenicRegion 0 16.77 12.05 11.18 15.61 18.23 17.63 11.28 25.82 53.68 4.78 2.95 4.25 0.95 0.79 2.23 1.85 2.45 9.06 7.50 12.21 8.20 9.52 8.12 71 IG34_AR4 ActiveIntergenicRegion 0 25.10 15.98 12.25 25.89 34.02 36.94 19.67 21.73 56.11 3.44 9.66 0.00 0.00 1.62 1.24 2.97 0.00 3.70 19.11 19.45 5.98 10.42 28.11 72 IG34_SR3 SilentIntergenicRegion 0 14.57 8.25 13.55 17.19 17.99 21.65 9.80 23.24 50.66 4.24 0.90 3.05 1.90 0.59 2.45 3.76 0.37 6.21 12.16 8.09 9.01 8.82 10.84 73 IG34_AR3 ActiveIntergenicRegion 0 12.49 9.44 9.32 17.91 14.53 14.31 5.69 15.19 31.65 2.94 1.91 0.00 1.26 0.20 1.24 0.49 0.99 2.72 8.83 4.75 7.91 6.63 9.22 74 IG34_AR2 ActiveIntergenicRegion 0 21.58 11.85 22.34 37.88 28.02 24.06 12.12 38.67 63.56 3.99 0.28 0.52 1.37 0.95 2.09 3.02 2.40 2.68 16.71 13.95 11.23 9.71 18.83