Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC48A1 Gene 0 65.02 28.40 31.38 42.32 29.96 30.39 16.77 49.96 66.18 38.88 7.50 21.26 8.53 13.94 11.57 24.12 9.84 59.50 50.70 37.87 45.97 34.56 43.76 2 442892 Transcript 0 2.26 1.40 3.35 2.57 1.19 2.30 0.78 3.41 2.86 0.56 0.00 6.70 0.00 2.22 0.00 0.02 0.00 1.65 2.41 0.24 14.50 3.78 4.09 3 442218 Transcript 0 10.95 3.73 11.87 6.66 5.30 9.28 3.81 14.44 20.62 8.45 0.34 2.08 0.21 1.99 0.96 4.33 0.92 16.43 12.00 12.08 8.11 6.65 10.31 4 432662 Transcript 0 2.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.85 0.00 0.00 0.00 0.00 0.00 3.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 390229 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 461620 Transcript 0 0.00 0.00 0.00 0.57 0.00 0.61 0.50 0.00 0.31 0.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.31 0.00 0.00 0.00 0.00 0.00 7 476104 Transcript 0 1.18 0.58 0.77 0.86 1.93 2.84 0.75 3.61 0.75 0.96 0.00 1.01 0.00 0.00 0.00 0.43 0.00 1.85 0.45 0.90 0.94 0.87 1.21 8 ER1a ExonRegion 0 3.68 1.50 2.72 3.03 3.57 4.02 0.53 3.30 2.35 1.69 0.00 1.19 0.00 1.49 0.00 0.06 0.00 3.37 3.10 0.71 20.34 8.58 3.92 9 E1a_E5a KnownJunction 0 3.11 2.70 6.09 4.69 0.00 2.90 1.81 6.94 3.41 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 23.17 2.76 4.27 10 ER2a ExonRegion 0 1.09 1.33 0.00 0.00 0.55 4.11 0.68 0.12 0.00 0.32 0.00 0.00 0.00 0.11 0.00 1.54 0.00 0.00 0.66 0.00 0.76 1.58 3.34 11 ER2b ExonRegion 0 4.76 6.40 4.02 6.37 6.01 9.96 4.13 7.91 10.14 8.36 2.44 3.78 0.97 5.76 2.13 3.10 1.89 11.58 10.70 8.33 10.52 8.09 8.35 12 E2a_E5a KnownJunction 0 9.85 6.38 18.83 19.08 0.00 0.00 2.03 41.90 47.80 30.57 0.00 0.00 0.00 16.72 4.45 29.48 8.98 80.46 25.13 41.42 18.90 24.92 28.68 13 ER3a ExonRegion 0 0.00 0.00 0.00 1.14 0.00 1.22 0.99 0.00 0.62 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.62 0.00 0.00 0.00 0.00 0.00 14 ER3b ExonRegion 0 3.46 2.21 1.33 1.06 3.32 3.63 2.12 1.87 2.00 2.13 0.35 0.55 0.00 0.69 0.00 0.54 2.40 2.94 9.25 5.02 4.00 1.13 6.40 15 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E4_Aa NovelBoundary 0 19.19 2.70 7.07 8.39 7.81 29.36 2.25 33.80 5.35 6.90 0.00 14.70 0.00 0.00 0.00 0.00 0.00 0.00 9.41 15.47 11.80 2.94 3.59 18 ER4a ExonRegion 0 3.53 1.73 2.31 2.59 5.78 8.53 2.25 10.83 2.24 2.88 0.00 3.03 0.00 0.00 0.00 1.29 0.00 5.54 1.35 2.71 2.81 2.62 3.62 19 E4_Da NovelBoundary 0 10.30 2.89 14.28 12.15 7.98 5.28 3.89 19.22 5.96 7.47 0.00 0.00 0.00 0.00 0.00 3.50 0.00 4.48 23.34 9.14 17.24 6.06 8.45 20 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E5_Aa NovelBoundary 0 14.37 3.09 12.63 8.26 7.72 0.00 2.03 23.21 2.86 6.31 0.00 0.00 0.00 2.35 0.00 0.00 0.00 9.53 9.60 3.20 2.53 3.12 4.35 22 ER5a ExonRegion 0 23.44 17.75 29.50 30.04 20.01 33.32 17.54 50.33 58.26 40.16 11.15 32.83 4.86 14.72 6.75 17.13 8.90 77.30 41.70 46.11 72.25 31.95 52.95 23 E5c_E6a KnownJunction 0 27.34 24.27 42.16 46.35 30.22 72.69 32.64 43.58 89.84 59.47 16.64 59.27 19.97 18.48 8.90 23.84 11.59 68.73 70.31 73.82 98.04 27.49 82.97 24 ER5b ExonRegion 0 23.28 26.44 31.86 44.98 26.76 62.35 26.48 39.75 74.11 56.20 15.46 43.29 9.38 19.49 8.70 17.83 13.20 72.06 47.78 61.70 101.37 25.00 67.54 25 ER5c ExonRegion 0 25.40 29.49 37.37 44.98 26.76 62.35 26.48 39.75 74.11 56.20 15.46 45.46 9.38 19.49 8.70 17.83 13.20 72.06 47.78 59.57 101.37 26.04 67.54 26 E6_Aa NovelBoundary 0 28.82 12.83 18.36 9.06 3.99 0.00 4.15 9.24 7.18 6.72 2.05 0.00 0.00 2.12 0.00 11.79 0.00 3.73 12.24 5.82 2.84 3.06 4.18 27 ER6a ExonRegion 0 39.02 40.40 48.50 51.56 23.06 36.17 16.60 56.90 76.56 50.87 20.02 20.91 6.85 24.90 21.57 23.86 10.51 73.42 93.42 44.82 83.10 36.60 61.63 28 E6_Da KnownBoundary 0 57.12 57.82 44.29 59.13 38.12 23.74 24.33 78.94 84.14 46.90 12.32 21.01 19.48 12.01 28.18 27.00 7.57 74.91 104.47 53.24 59.06 47.27 66.24 29 E6a_E6b KnownJunction 0 2.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.85 0.00 0.00 0.00 0.00 0.00 3.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER6b ExonRegion 0 27.51 43.91 29.62 51.85 36.92 30.27 21.24 47.65 70.63 50.61 8.07 32.31 5.10 21.02 15.43 18.95 14.64 73.13 67.03 51.22 59.21 32.16 65.07 31 E6_Db KnownBoundary 0 23.56 33.28 29.33 49.88 58.74 30.61 30.21 39.84 65.57 60.41 9.16 17.71 6.82 12.30 0.00 31.02 0.00 69.48 40.19 31.83 47.75 11.63 61.97 32 E6b_E6c KnownJunction 0 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 2.81 0.00 0.00 18.91 0.00 2.71 0.00 0.00 0.00 1.58 4.14 0.00 0.00 0.00 4.10 33 ER6c ExonRegion 0 75.48 58.06 36.31 54.42 50.51 36.63 33.35 51.79 75.29 54.51 14.66 24.41 19.02 23.16 29.78 48.69 21.15 77.75 69.79 55.82 64.15 59.68 69.04 34 E6_Ab KnownBoundary 0 166.40 133.99 167.08 214.52 126.91 121.07 208.45 178.01 178.99 181.59 39.85 80.13 51.13 53.45 76.64 157.65 121.65 314.96 94.69 137.74 96.62 70.85 169.96 35 ER6d ExonRegion 0 134.84 63.94 36.49 98.15 108.63 81.76 48.91 75.24 121.16 62.52 19.30 61.69 26.45 45.02 63.91 57.34 15.63 125.29 87.11 70.39 69.78 46.71 76.52 36 E6_Dc KnownBoundary 0 332.36 82.16 42.31 135.81 164.77 107.10 62.84 109.42 160.62 91.41 16.90 30.61 20.29 64.75 20.03 41.95 13.46 137.92 76.43 86.48 117.93 80.22 83.06 37 ER6e ExonRegion 0 180.65 53.34 56.57 98.74 57.75 54.28 26.34 102.32 123.32 77.39 13.46 51.64 19.63 27.25 17.62 42.88 19.17 110.42 103.20 60.32 93.02 66.49 78.36 38 E6_Dd KnownBoundary 0 39.93 18.02 53.84 35.66 26.99 30.04 30.60 43.29 40.34 28.74 2.68 12.60 0.00 12.01 15.20 6.58 0.00 27.73 47.81 39.88 22.12 21.25 25.78 39 ER6f ExonRegion 0 31.74 9.86 35.61 19.98 15.34 23.74 10.74 41.47 61.85 25.02 1.01 6.25 0.63 5.85 2.89 11.44 2.77 49.28 32.16 36.24 21.37 18.37 27.60 40 E6_Ac KnownBoundary 0 62.53 13.22 49.91 22.34 9.68 31.12 10.16 55.61 87.21 38.65 0.00 19.36 0.00 4.59 0.00 35.38 0.00 59.03 38.68 31.38 19.65 26.45 30.73 41 ER6g ExonRegion 0 24.91 14.49 26.72 23.91 15.21 24.02 9.10 44.14 64.59 27.49 3.88 8.00 1.88 4.67 2.63 18.13 3.79 40.67 29.97 29.43 22.43 24.01 29.18 42 ER6h ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.19 0.00 2.20 0.00 0.00