Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 STK38L Gene 0 44.04 62.05 53.92 62.13 79.96 63.46 53.21 43.08 43.15 43.88 201.25 149.04 279.01 118.83 90.29 67.98 130.38 15.56 17.24 36.53 15.94 165.30 97.04 2 389032 Transcript 0 32.71 61.93 39.54 39.98 56.20 46.25 41.60 32.99 39.19 36.34 352.75 194.11 354.36 213.92 122.74 122.84 252.19 26.22 23.40 45.07 32.02 169.35 174.51 3 ER1a ExonRegion 0 7.33 5.06 3.66 1.56 6.89 14.50 10.52 1.83 4.28 4.64 27.53 0.18 12.64 29.61 19.61 22.40 41.59 3.19 2.40 10.45 10.09 14.26 42.47 4 E1a_E2a KnownJunction 1 23.63 12.17 20.05 8.12 16.38 24.08 42.00 14.99 16.78 17.73 132.40 0.00 27.76 102.36 49.69 135.43 197.29 12.39 7.72 30.42 31.32 59.15 260.87 5 I1_AR6 ActiveIntronRegion 0 3.29 5.87 3.99 3.18 0.00 7.52 7.89 0.00 4.74 3.23 2.01 6.87 8.10 1.71 4.31 0.00 7.37 6.35 5.57 27.01 1.16 3.24 9.05 6 I1_SR6 SilentIntronRegion 0 2.38 10.35 7.25 4.70 2.80 3.31 3.97 0.38 6.24 2.68 1.08 3.68 18.26 0.79 2.53 2.47 8.70 3.14 3.09 20.35 2.06 2.31 4.27 7 I1_AR9 ActiveIntronRegion 0 5.71 13.56 11.77 6.89 2.91 3.52 5.44 1.51 16.01 6.01 1.59 6.05 21.19 0.44 3.48 5.14 7.50 3.63 2.51 38.32 3.20 3.55 8.89 8 ER2a ExonRegion 1 5.68 5.83 22.08 15.33 16.17 16.07 10.65 13.91 18.59 15.97 222.54 47.30 79.99 88.25 42.50 57.00 161.86 30.23 13.55 26.81 32.07 49.24 103.75 9 E2a_E3a KnownJunction 1 3.41 7.83 35.84 18.88 19.35 20.44 17.09 22.34 21.90 15.79 386.57 100.53 170.28 193.01 101.00 111.34 217.39 37.18 44.14 50.05 41.02 104.16 295.70 10 I2_AR2 ActiveIntronRegion 0 5.42 6.26 2.45 3.33 2.68 1.83 12.45 5.05 4.15 0.00 1.39 4.50 2.44 3.25 6.73 0.24 9.77 3.70 14.40 0.00 0.00 5.17 8.22 11 ER3a ExonRegion 0 15.96 10.52 36.93 23.69 31.59 25.39 14.54 17.75 27.91 24.83 287.00 123.97 223.95 204.42 103.44 160.44 217.35 51.67 29.04 48.16 36.19 152.58 303.04 12 E3_Da NovelBoundary 0 30.45 8.29 22.80 25.47 15.20 34.92 9.89 11.09 7.09 5.88 7.21 6.90 13.80 2.41 10.14 0.00 3.74 1.53 0.00 2.81 0.00 11.45 0.00 13 E3a_E4a KnownJunction 0 2.82 3.35 40.92 23.14 53.14 30.95 15.72 13.84 31.05 23.80 221.95 137.14 299.01 190.95 100.38 256.86 260.96 48.17 13.27 46.47 33.67 147.82 381.40 14 E3a_E5a NovelJunction 0 0.00 0.00 1.83 0.00 7.89 0.00 0.00 1.73 1.53 0.00 16.43 6.30 13.64 9.54 0.00 3.76 3.46 0.00 3.67 3.20 0.00 2.57 12.04 15 ER4a ExonRegion 0 12.13 20.86 40.21 34.89 35.05 39.08 32.04 21.06 30.05 27.61 291.87 128.02 205.98 195.28 73.69 117.41 261.71 29.91 17.04 34.87 42.48 137.72 161.32 16 E4a_E5a KnownJunction 1 15.11 29.07 31.19 40.09 34.30 26.63 57.19 14.05 43.32 29.55 335.98 163.40 300.63 250.58 60.33 132.19 279.10 27.40 39.44 57.85 51.89 149.10 172.35 17 ER5a ExonRegion 0 18.75 30.29 44.38 34.22 33.38 52.00 41.25 34.98 35.89 28.97 405.52 147.30 326.46 240.45 110.18 137.25 330.01 28.22 31.82 56.53 52.89 205.13 162.60 18 E5a_E6a KnownJunction 0 39.19 56.24 45.77 37.36 70.80 80.86 59.09 50.44 34.29 34.20 398.57 194.91 449.00 238.39 141.29 166.71 318.65 30.97 20.89 38.16 34.04 156.21 188.82 19 ER6a ExonRegion 0 22.09 29.96 32.99 38.84 63.59 57.05 50.78 35.92 51.61 28.86 488.52 206.21 392.75 268.02 135.98 132.64 333.82 30.13 18.50 62.47 42.60 217.93 190.55 20 E6a_E7a KnownJunction 0 33.78 37.49 40.18 49.68 61.21 47.25 44.12 52.74 68.92 23.88 482.75 166.85 555.32 283.48 108.66 139.37 366.90 23.79 33.70 42.12 56.34 205.87 174.82 21 ER7a ExonRegion 0 36.64 45.22 37.87 52.32 53.22 44.15 41.19 42.42 55.61 40.72 498.41 214.60 482.29 266.51 129.32 150.95 370.70 38.33 22.67 51.70 49.59 230.22 198.12 22 E7_Da NovelBoundary 0 13.11 3.35 7.54 16.98 30.22 2.90 0.00 9.86 10.21 7.23 80.81 29.86 67.85 33.85 39.68 12.13 34.69 8.04 4.80 18.60 8.46 56.21 20.23 23 E7a_E8a KnownJunction 0 21.41 47.03 29.06 28.43 135.57 46.17 72.34 44.40 40.71 35.08 361.35 337.16 492.01 262.76 128.44 95.87 276.11 24.29 20.61 50.88 25.39 169.98 142.90 24 E7a_E9a NovelJunction 0 0.00 0.00 3.13 0.00 0.00 0.00 0.00 1.85 0.00 0.00 6.84 0.00 0.00 0.00 0.00 0.00 17.58 0.00 0.00 0.00 0.00 0.00 0.00 25 I7 Intron 0 14.93 10.46 12.88 12.24 11.01 5.93 10.32 9.46 8.93 10.05 24.72 29.64 43.66 21.39 6.62 10.92 19.89 1.49 2.34 7.82 0.97 46.85 14.24 26 I7_AR1 ActiveIntronRegion 0 15.02 10.52 12.96 12.31 11.08 5.96 10.37 9.52 8.98 10.11 24.86 29.82 43.91 21.50 6.66 10.98 20.01 1.50 2.35 7.86 0.98 47.12 14.33 27 E8_Aa NovelBoundary 0 7.56 9.74 10.88 7.16 11.54 2.67 9.01 19.39 9.46 17.70 18.69 46.37 52.59 23.78 13.97 7.69 17.58 6.30 4.71 5.69 2.78 98.10 31.50 28 ER8a ExonRegion 0 33.25 85.73 37.75 56.14 97.91 82.75 61.33 50.46 52.62 56.12 522.82 289.02 613.44 299.31 137.88 173.83 341.92 36.69 31.76 59.33 47.26 288.54 206.91 29 E8a_E9a KnownJunction 0 13.48 88.27 22.62 44.98 75.21 27.48 35.77 29.16 37.33 55.04 297.29 233.03 406.30 251.75 131.78 106.13 225.15 25.25 21.08 47.62 34.97 152.66 179.35 30 I8 Intron 0 7.57 10.31 3.27 2.42 10.37 4.38 7.90 5.38 5.49 6.12 37.47 31.98 58.67 10.63 7.94 8.86 18.69 4.94 1.90 6.98 2.63 42.88 22.77 31 I8_AR1 ActiveIntronRegion 0 7.66 10.43 3.31 2.45 10.50 4.43 7.99 5.44 5.55 6.19 37.90 32.30 59.33 10.75 8.02 8.97 18.91 5.00 1.92 7.06 2.66 43.33 23.02 32 E9_Aa NovelBoundary 0 13.04 5.79 12.27 17.71 4.33 5.68 11.92 15.12 6.13 5.64 53.86 11.70 87.98 21.78 26.95 12.99 22.25 1.74 0.00 14.00 2.78 48.25 23.73 33 ER9a ExonRegion 0 21.23 104.76 18.52 33.79 52.13 41.64 35.11 34.12 34.76 47.28 362.48 240.84 493.29 197.12 121.06 97.17 245.65 25.21 16.49 57.10 28.86 148.50 144.70 34 E9_Da NovelBoundary 0 6.82 11.84 12.18 8.86 0.00 2.90 5.39 14.13 2.37 4.06 15.27 36.61 72.40 7.42 0.00 0.00 21.22 4.35 4.52 20.26 3.15 31.84 12.21 35 E9a_E10a KnownJunction 0 30.15 121.43 19.37 42.69 51.95 47.53 30.83 38.53 36.60 38.68 411.31 309.70 442.02 210.31 170.22 113.65 287.52 17.00 12.99 49.47 25.70 125.65 116.09 36 I9 Intron 0 3.07 6.41 7.19 10.18 5.82 7.63 7.14 6.01 8.64 6.03 24.37 11.86 31.60 10.78 3.66 8.06 14.77 3.39 1.61 5.97 3.26 33.62 16.48 37 I9_SR1 SilentIntronRegion 0 2.55 6.84 6.58 10.10 5.39 8.13 7.45 5.39 9.38 6.71 24.52 11.52 29.93 11.66 3.09 7.94 15.40 3.73 1.64 5.78 3.74 33.39 17.36 38 I9_AR2 ActiveIntronRegion 0 4.96 2.78 7.14 10.72 6.92 7.24 6.06 9.06 7.19 4.68 24.56 13.35 35.89 7.41 4.17 7.82 10.97 3.59 1.96 5.51 2.14 37.56 13.50 39 E10_Aa NovelBoundary 0 21.34 28.35 9.17 9.06 16.64 0.00 6.71 6.41 13.19 8.65 35.22 18.46 80.84 2.30 10.63 19.57 28.99 4.35 0.00 2.94 12.05 44.33 8.37 40 ER10a ExonRegion 0 50.87 118.09 34.81 53.16 59.27 44.03 47.00 39.49 39.05 50.14 328.33 311.46 445.59 177.98 123.77 89.44 238.06 17.16 21.30 47.85 35.26 174.66 113.86 41 E10_Da NovelBoundary 0 0.00 6.25 19.72 8.19 8.06 8.69 9.58 11.34 9.55 4.78 43.17 36.76 19.15 15.07 4.45 15.72 23.19 5.64 0.00 6.26 5.87 25.04 16.99 42 E10a_E11a KnownJunction 0 40.38 98.47 34.42 45.08 34.55 24.87 29.72 34.71 42.62 38.76 320.82 284.79 388.12 206.31 150.20 105.78 205.24 12.15 23.25 40.97 18.41 201.03 123.35 43 I10 Intron 0 9.04 14.31 16.65 5.39 10.81 6.14 9.32 7.13 8.07 6.90 24.09 11.87 22.86 10.34 4.12 10.29 16.00 2.87 2.57 5.16 3.56 30.78 13.55 44 I10_AR1 ActiveIntronRegion 0 9.08 14.38 16.72 5.41 10.85 6.16 9.36 7.17 8.11 6.93 24.19 11.93 22.96 10.38 4.13 10.33 16.07 2.88 2.58 5.18 3.58 30.92 13.62 45 E11_Aa NovelBoundary 0 10.15 29.14 35.19 3.80 10.95 9.88 15.19 2.30 14.44 3.81 54.75 6.30 75.81 17.48 4.45 0.00 8.04 1.91 4.80 6.52 3.15 48.07 11.35 46 ER11a ExonRegion 0 43.32 91.35 64.09 57.56 76.39 59.69 50.80 35.75 44.17 51.95 352.89 274.12 459.43 198.95 166.54 111.12 199.49 20.82 21.45 45.56 16.65 241.30 126.75 47 E11a_E12a KnownJunction 0 72.24 129.91 79.18 47.41 105.77 74.90 84.97 33.23 40.54 51.44 352.98 340.91 349.81 243.39 221.52 90.66 124.54 8.25 37.74 33.56 8.03 240.53 135.73 48 ER12a ExonRegion 0 41.67 135.25 61.17 52.80 63.24 64.11 43.83 37.36 45.60 48.68 448.21 286.20 510.63 229.12 164.92 128.67 278.72 23.04 31.22 38.43 20.13 215.80 158.46 49 E12a_E13a KnownJunction 0 74.38 139.84 41.69 54.90 38.03 46.22 46.77 52.41 38.25 50.88 438.43 155.00 390.88 310.73 160.58 190.38 274.80 32.00 43.30 43.98 22.98 282.90 254.72 50 E12a_E14a NovelJunction 0 3.56 0.00 5.29 3.43 0.00 0.00 4.42 0.00 0.00 0.00 0.00 0.00 0.00 4.77 15.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 ER13a ExonRegion 0 66.23 86.69 61.49 55.11 60.23 52.98 43.04 45.26 60.05 45.88 518.58 183.91 384.74 246.07 160.83 125.28 332.06 36.75 25.93 47.73 20.05 222.12 157.59 52 E13a_E14a KnownJunction 0 87.42 66.17 70.31 57.30 79.03 86.60 45.27 31.30 59.90 46.77 486.91 226.72 408.41 301.43 216.82 117.06 339.32 26.65 14.31 64.11 37.44 114.81 138.63 53 ER14a ExonRegion 0 50.63 65.18 61.11 72.04 93.03 71.43 60.17 48.38 45.65 47.81 142.17 137.64 256.96 89.42 83.26 51.71 83.36 11.12 16.13 34.17 9.22 164.58 76.81