Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KIAA1602 Gene 0 17.81 23.82 79.49 47.76 22.15 40.74 40.30 43.96 45.46 89.42 44.53 5.79 13.04 34.49 38.08 40.32 37.96 83.68 79.96 50.71 75.02 47.81 56.74 2 480927 Transcript 0 0.02 0.34 0.00 0.23 1.90 0.18 0.59 0.11 0.00 0.36 0.66 0.00 0.00 1.37 0.08 2.70 1.34 0.85 1.83 0.08 5.35 0.04 1.54 3 335999 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 354423 Transcript 0 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.19 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 5 477361 Transcript 0 9.19 10.91 10.22 9.94 10.78 9.14 16.91 5.04 8.69 12.69 3.76 6.11 10.18 10.03 15.10 13.03 8.61 10.04 14.08 15.40 11.45 12.13 17.06 6 408986 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 491441 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 433948 Transcript 0 13.77 16.08 94.63 69.14 14.16 33.13 26.63 39.51 27.88 78.60 19.89 3.09 3.25 10.10 15.13 28.96 13.62 103.27 95.35 42.59 35.97 33.48 37.57 9 ER1a ExonRegion 0 0.03 0.00 0.00 0.00 0.04 0.35 0.30 0.02 0.00 0.53 0.03 0.00 0.00 0.00 0.15 0.10 0.00 0.11 0.70 0.00 0.00 0.08 0.00 10 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 7.44 8.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 2.07 0.00 0.00 0.00 2.57 0.00 11 ER1b ExonRegion 0 18.78 11.33 19.36 7.83 16.86 57.61 44.86 5.89 13.17 26.94 20.21 0.00 0.14 9.22 12.28 24.21 34.32 32.92 35.53 28.69 42.96 8.27 45.28 12 E1a_E2a KnownJunction 0 0.00 5.13 26.23 12.79 3.14 9.43 11.13 5.30 13.45 32.77 9.21 0.00 0.00 0.00 0.00 7.01 0.00 23.34 0.00 2.75 15.57 2.33 3.41 13 I1_AR2 ActiveIntronRegion 0 6.35 4.07 2.45 2.73 10.70 0.92 14.12 3.46 9.88 3.44 0.00 0.00 0.00 0.00 0.00 8.42 2.20 7.39 14.87 2.13 6.61 2.08 14.68 14 I1_AR3 ActiveIntronRegion 0 6.53 4.07 2.45 2.73 10.70 1.83 14.45 2.74 9.88 3.44 0.00 0.00 0.00 0.00 0.00 4.71 0.00 6.47 15.93 1.95 4.22 1.04 14.68 15 ER2a ExonRegion 0 3.31 6.86 18.34 12.09 4.45 5.00 12.30 6.05 6.89 26.80 15.65 2.93 8.40 1.81 9.97 7.43 13.10 13.83 5.75 6.35 23.81 9.75 13.17 16 E2_Da KnownBoundary 0 0.00 2.96 1.74 1.47 8.66 0.00 2.25 0.00 0.00 1.02 2.47 0.00 0.00 2.24 0.00 7.26 4.49 6.67 4.05 0.00 22.55 0.00 3.50 17 E2a_E3d KnownJunction 0 12.45 3.29 23.12 10.82 0.00 0.00 8.44 10.97 8.77 30.89 16.48 0.00 0.00 4.65 8.90 10.85 31.51 9.91 12.24 9.40 22.92 16.23 11.27 18 ER2b ExonRegion 0 0.00 0.68 0.00 0.45 3.76 0.00 0.88 0.21 0.00 0.19 1.29 0.00 0.00 2.75 0.00 5.31 2.67 1.58 2.96 0.15 10.70 0.00 3.08 19 E2_Db NovelBoundary 0 0.00 9.67 1.15 11.35 10.78 4.49 7.02 3.53 0.00 9.24 2.68 0.00 5.68 0.00 4.45 16.92 4.02 6.63 29.37 23.07 22.30 16.72 14.34 20 E3_Aa NovelBoundary 0 7.41 5.26 6.27 4.13 3.82 5.62 12.41 0.00 12.15 6.90 15.95 0.00 0.00 7.77 6.30 11.54 4.58 4.39 0.00 10.80 18.90 11.63 12.63 21 ER3a ExonRegion 0 0.00 0.00 1.56 0.00 0.00 0.00 0.72 0.00 0.34 0.00 0.00 0.00 0.00 4.13 0.00 0.00 0.00 0.00 0.00 0.00 5.01 0.00 0.80 22 ER3b ExonRegion 0 7.06 4.08 7.48 13.41 11.33 13.06 13.41 8.80 12.28 15.45 7.85 3.42 6.92 8.64 7.97 13.03 11.30 11.69 19.56 19.66 27.96 15.50 21.48 23 E3_Ac KnownBoundary 0 7.48 12.43 8.87 16.68 6.79 20.05 20.89 7.85 9.52 18.59 7.84 0.00 0.00 2.47 4.45 11.36 4.77 10.53 4.71 35.92 33.48 18.49 28.60 24 ER3c ExonRegion 0 6.93 6.53 12.71 14.14 15.66 9.95 21.80 7.53 13.13 17.94 12.25 2.25 5.71 8.43 9.55 9.53 9.75 19.66 17.95 21.08 29.44 18.69 24.14 25 E3_Ad KnownBoundary 0 3.63 5.79 12.12 16.12 3.74 2.16 19.39 17.54 17.48 18.70 4.79 6.30 8.28 9.24 13.35 4.36 0.00 11.28 32.19 20.45 22.55 8.76 30.22 26 ER3d ExonRegion 0 14.98 11.21 50.91 35.99 13.99 23.87 27.97 37.69 45.26 75.46 53.00 1.53 11.43 36.05 39.72 41.44 50.52 83.16 79.90 64.23 78.04 43.62 73.23 27 E3a_E4a KnownJunction 0 15.56 17.23 62.77 54.94 73.34 64.05 53.30 61.73 51.79 90.85 69.97 0.00 6.82 43.50 42.77 39.73 43.38 96.79 59.48 91.27 97.79 45.37 77.77 28 ER4a ExonRegion 0 7.30 20.90 91.35 77.15 48.55 84.91 73.62 76.33 56.37 112.38 59.64 10.54 19.03 50.70 65.55 54.66 71.62 139.87 127.00 108.66 98.69 75.22 89.38 29 E4_Da KnownBoundary 0 6.15 2.89 4.76 0.00 4.16 12.55 19.61 8.46 2.49 0.00 0.00 0.00 5.84 0.00 4.45 0.00 3.74 6.14 3.95 3.20 2.41 3.12 0.00 30 E4a_E4b KnownJunction 0 17.56 37.30 110.91 119.90 47.45 115.39 69.11 75.00 63.43 145.86 49.85 0.00 0.00 63.92 60.82 60.75 87.89 141.85 195.39 103.23 127.94 84.75 65.81 31 ER4b ExonRegion 0 1.82 2.46 8.37 1.11 4.03 4.01 8.26 5.89 2.86 3.28 1.01 1.80 0.19 2.01 2.07 5.59 3.76 9.64 4.73 4.47 3.75 1.46 2.99 32 E4_Ab KnownBoundary 0 0.00 0.00 1.48 0.00 15.70 0.00 10.02 6.90 1.79 2.10 2.63 0.00 0.00 0.00 0.00 8.03 0.00 9.53 4.61 5.82 3.15 0.00 4.35 33 ER4c ExonRegion 0 10.14 20.60 125.28 110.68 42.81 87.15 79.09 76.64 79.83 193.04 98.53 3.87 20.49 59.92 61.54 69.92 89.30 185.55 181.31 115.51 121.90 100.67 92.97 34 E4_Db KnownBoundary 0 3.19 0.00 9.22 10.99 3.40 15.39 24.20 7.60 10.27 15.34 0.00 5.85 0.00 0.00 0.00 0.00 8.04 3.19 15.34 8.50 12.23 17.33 32.10 35 E4b_E5a KnownJunction 0 0.00 22.63 98.93 62.70 34.97 55.65 51.71 48.59 61.95 149.89 141.35 0.00 19.80 42.62 76.64 59.30 85.55 138.58 149.37 99.84 106.63 89.09 70.77 36 E4_Dc KnownBoundary 0 0.00 0.00 10.73 2.06 3.82 13.34 11.75 8.05 7.99 16.17 2.58 0.00 0.00 7.12 4.45 3.50 4.02 6.92 12.61 11.76 5.68 9.25 15.71 37 ER4d ExonRegion 0 2.38 0.00 17.61 12.10 11.71 19.71 32.27 12.10 14.20 35.41 1.93 4.33 1.17 8.73 3.26 5.20 13.20 14.32 27.08 17.29 17.63 22.40 36.34 38 ER4e ExonRegion 0 3.05 3.64 18.04 18.49 9.00 11.53 22.20 9.11 14.85 26.71 9.98 0.80 0.87 9.05 10.27 22.34 10.24 16.11 32.08 17.92 30.90 24.32 28.35 39 E4_Dd KnownBoundary 0 14.22 0.00 25.87 24.54 15.79 13.23 39.97 6.28 22.60 27.35 19.79 0.00 0.00 7.12 10.75 48.88 14.31 26.74 83.96 22.82 37.13 27.98 39.95 40 ER4f ExonRegion 0 18.39 21.83 18.89 19.88 21.56 18.28 33.10 10.08 17.04 25.38 7.52 12.23 20.36 15.93 30.21 26.05 17.22 20.07 28.15 30.79 17.90 24.25 33.33 41 E4_De NovelBoundary 0 53.86 41.44 18.80 28.20 43.21 14.99 66.82 22.26 21.70 25.92 2.68 6.15 0.00 7.06 9.27 42.72 20.38 19.94 29.65 39.63 15.69 7.78 35.25 42 I4 Intron 0 10.76 12.18 27.18 23.96 10.68 19.64 34.60 18.23 23.72 31.33 10.17 3.88 10.67 9.54 17.69 16.18 7.79 23.00 33.53 27.03 27.59 36.30 28.25 43 I4_SR1 SilentIntronRegion 0 10.79 12.22 27.27 24.05 10.71 19.71 34.72 18.30 23.80 31.44 10.21 3.90 10.70 9.57 17.75 16.24 7.80 23.08 33.65 27.13 27.69 36.42 28.34 44 E5_Aa NovelBoundary 0 6.82 18.22 35.69 39.09 15.53 30.55 30.78 30.19 26.85 36.00 9.21 12.60 0.00 2.41 0.00 12.22 16.83 40.38 33.88 35.86 28.73 20.45 23.56 45 ER5a ExonRegion 0 21.09 27.17 132.56 86.29 20.51 49.60 68.47 69.18 70.94 178.98 101.80 17.03 22.04 60.72 77.66 80.99 81.70 170.29 156.69 113.65 144.84 85.27 101.78 46 E5a_E6a KnownJunction 0 48.38 21.31 144.94 118.23 15.96 51.90 72.56 69.78 77.86 213.85 111.03 6.00 34.90 42.38 82.70 98.44 52.73 173.44 126.40 92.04 144.87 89.28 113.11 47 ER6a ExonRegion 0 24.43 16.68 89.51 57.72 24.27 31.98 42.15 40.89 49.27 132.22 60.60 9.04 16.42 48.15 50.19 53.34 50.85 88.51 117.22 76.73 95.18 75.37 51.88 48 E6a_E7a KnownJunction 0 16.97 12.23 102.95 49.71 27.25 34.98 44.74 47.52 60.18 139.12 67.07 0.00 6.01 45.62 18.17 65.97 42.08 110.10 143.82 50.88 117.75 53.58 49.77 49 ER7a ExonRegion 0 9.47 16.52 88.06 42.20 15.51 33.92 38.60 48.52 50.61 114.90 62.12 3.78 8.49 47.68 44.96 45.81 53.69 103.14 106.97 54.42 101.72 51.69 55.10 50 E7_Ab KnownBoundary 1 6.52 21.71 80.84 39.02 12.65 26.52 44.69 70.36 65.10 121.85 63.44 0.00 20.29 40.91 39.06 22.56 87.42 136.55 82.83 64.30 125.72 40.05 47.04 51 ER7b ExonRegion 0 20.08 34.24 114.76 63.61 27.95 67.98 61.59 73.81 74.11 143.03 75.00 10.13 23.28 59.75 55.62 61.03 60.28 153.04 134.40 77.92 127.99 74.30 91.41 52 E7_Da KnownBoundary 0 16.45 49.53 110.23 79.61 13.58 60.53 70.62 85.31 75.84 197.46 79.70 11.70 6.33 57.92 77.63 63.91 73.96 162.00 146.55 105.91 84.88 58.23 91.77 53 E7a_E7c KnownJunction 0 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.19 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 54 ER7c ExonRegion 0 16.11 46.41 108.03 64.97 19.21 62.13 58.67 71.80 61.13 179.93 78.79 6.33 21.56 50.69 61.79 64.94 65.43 137.20 137.16 67.13 83.02 81.88 110.41 55 E7_Ac KnownBoundary 0 24.52 79.39 174.74 90.07 34.30 83.13 58.87 102.23 99.42 187.55 92.18 18.31 34.74 55.68 63.42 103.22 52.27 227.58 157.18 102.78 124.17 122.83 181.48 56 ER7d ExonRegion 0 25.40 41.30 145.18 65.97 28.48 70.32 60.49 69.99 71.80 142.37 71.29 6.94 12.81 54.90 57.96 57.62 53.33 117.07 113.82 76.07 105.64 65.14 81.54 57 E7b_E8a KnownJunction 0 29.56 82.62 165.40 94.39 58.57 119.65 121.58 121.05 91.17 186.10 84.81 6.30 6.82 44.97 56.62 53.06 63.11 115.61 108.80 78.04 116.39 97.79 67.52 58 ER8a ExonRegion 0 15.53 33.92 232.02 102.61 39.33 81.46 76.48 108.78 92.71 208.21 85.18 4.46 14.56 56.26 69.36 76.09 67.56 151.70 118.58 70.29 126.57 112.01 86.12 59 E8a_E9a KnownJunction 0 25.49 41.11 306.38 149.20 35.06 77.06 66.24 140.10 116.55 240.92 121.29 19.06 13.64 69.87 97.66 95.19 69.28 198.15 229.28 104.70 136.28 174.27 185.41 60 ER9a ExonRegion 0 16.18 34.87 245.63 117.57 13.12 59.98 45.26 110.14 116.66 227.20 98.53 6.60 28.20 49.75 60.86 69.12 97.54 106.07 208.91 93.64 135.15 111.87 103.53 61 E9_Da NovelBoundary 0 0.00 0.00 3.16 7.23 0.00 5.79 0.00 6.16 3.18 4.94 7.26 0.00 0.00 4.77 0.00 8.72 0.00 33.91 0.00 8.76 2.97 6.25 7.94 62 E9a_E10a KnownJunction 1 3.11 57.29 199.93 119.00 15.45 66.78 49.29 97.14 90.19 221.53 80.07 12.15 27.60 28.43 9.89 14.87 76.02 41.62 60.24 71.33 139.25 39.62 30.90 63 E10_Aa NovelBoundary 0 3.04 5.13 0.00 0.00 3.48 4.54 0.00 6.00 4.54 1.21 4.74 0.00 6.33 0.00 10.01 8.20 7.76 36.15 15.06 0.00 16.87 0.00 15.28 64 ER10a ExonRegion 0 27.21 38.42 123.99 70.63 33.00 58.67 45.23 69.29 72.42 140.86 73.09 7.86 33.62 54.94 60.20 59.06 68.73 117.05 118.09 62.25 123.09 69.92 75.35 65 E10a_E11a KnownJunction 0 20.37 45.12 130.16 56.54 55.52 61.73 64.70 59.27 83.74 134.36 69.49 31.06 40.26 61.22 51.92 69.47 69.75 109.27 178.17 69.09 99.15 63.68 96.29 66 ER11a ExonRegion 0 22.41 43.96 125.96 67.06 26.35 62.32 57.25 63.96 66.80 136.38 63.30 14.53 33.32 64.49 66.06 52.02 61.96 116.74 113.54 66.85 104.93 61.53 78.78 67 E11_Da KnownBoundary 0 13.85 22.50 96.60 70.92 21.14 49.80 38.47 21.85 26.74 83.03 9.37 0.00 0.00 18.66 10.63 7.86 29.55 92.32 27.77 46.08 28.17 8.63 34.83 68 E11a_E11b KnownJunction 0 20.89 0.00 34.77 22.87 15.11 15.84 14.53 20.78 56.28 44.86 17.11 0.00 6.49 34.55 31.15 32.64 25.71 42.49 29.84 13.29 28.54 19.04 25.69 69 ER11b ExonRegion 0 13.77 16.08 94.63 69.14 14.16 33.13 26.63 39.51 27.88 78.60 19.89 3.09 3.25 10.10 15.13 28.96 13.62 103.27 95.35 42.59 35.97 33.48 37.57 70 E11_Ab KnownBoundary 0 9.26 3.35 56.74 43.95 7.98 46.51 32.50 32.08 20.40 44.00 14.11 0.00 0.00 4.83 10.01 8.37 11.87 58.91 51.01 23.20 26.13 25.29 19.46 71 ER11c ExonRegion 0 43.91 43.37 108.24 78.06 36.07 51.91 44.28 58.80 60.05 104.74 50.94 4.19 9.16 42.37 57.54 57.97 41.75 94.38 84.38 56.91 87.17 58.17 67.40