Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PRICKLE1 Gene 0 35.17 120.21 33.16 16.41 17.18 23.00 22.06 31.11 19.25 16.88 40.76 38.13 32.45 47.85 38.80 71.54 31.83 66.35 10.06 19.16 113.94 162.66 69.40 2 345127 Transcript 0 0.18 4.26 1.07 0.99 0.23 3.71 1.58 3.67 3.32 0.43 0.00 0.00 0.00 0.33 0.17 2.48 8.29 35.27 0.53 0.89 22.61 18.80 10.40 3 455697 Transcript 0 0.00 3.35 1.54 1.30 0.00 2.61 4.02 1.56 1.33 1.67 0.00 0.00 5.68 5.71 0.00 7.26 0.00 1.95 0.00 3.00 5.44 3.00 12.29 4 441767 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.38 0.00 0.00 0.00 0.00 0.00 3.09 0.00 0.00 5 445766 Transcript 0 0.23 0.00 0.01 0.00 0.29 0.00 0.42 0.00 0.00 0.18 1.45 0.00 0.00 1.01 0.44 2.66 0.35 2.66 0.00 1.75 7.14 1.85 1.88 6 ER1a ExonRegion 0 0.35 2.33 2.14 0.71 0.46 1.74 1.16 0.93 0.99 0.85 0.00 0.00 0.00 0.67 0.34 0.86 8.54 14.50 1.06 1.77 20.09 7.61 10.05 7 E1a_E4a KnownJunction 0 0.00 6.18 0.00 1.27 0.00 5.68 1.99 6.41 5.64 0.00 0.00 0.00 0.00 0.00 0.00 4.10 8.04 56.04 0.00 0.00 25.14 30.00 10.76 8 I1_AR4 ActiveIntronRegion 0 0.00 6.10 5.12 3.72 0.00 3.33 1.32 8.01 1.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.45 0.00 2.13 3.41 2.08 9.34 9 I1_AR13 ActiveIntronRegion 0 3.51 11.14 2.92 5.81 0.48 0.98 5.05 5.47 1.69 0.40 0.00 0.00 0.00 0.00 0.26 0.88 3.24 8.60 2.88 2.86 7.35 1.19 16.87 10 I1_SR9 SilentIntronRegion 0 3.54 15.97 7.68 7.68 1.00 2.30 4.83 6.08 3.60 1.89 0.06 0.33 0.06 0.33 0.26 0.81 3.50 10.23 1.75 3.67 6.34 5.39 14.90 11 I1_AR16 ActiveIntronRegion 0 7.77 19.91 13.09 15.77 0.60 4.06 6.47 10.54 7.66 4.74 0.00 2.37 0.00 0.00 0.61 0.89 4.76 6.32 2.87 4.86 5.06 9.45 18.61 12 I1_SR10 SilentIntronRegion 0 3.75 18.14 9.42 8.44 1.26 2.68 4.67 7.10 5.02 2.37 0.05 0.32 0.31 0.18 0.11 0.80 2.51 8.73 1.46 2.30 5.82 8.34 14.97 13 ER2a ExonRegion 0 1.81 6.78 2.45 0.48 1.15 0.79 1.05 3.40 0.47 0.93 5.52 0.00 0.00 4.31 7.35 17.40 3.54 6.18 0.68 1.37 13.17 7.14 10.30 14 E2a_E4a KnownJunction 0 0.00 3.35 1.54 1.30 0.00 2.61 4.02 1.56 1.33 1.67 0.00 0.00 5.68 5.71 0.00 7.26 0.00 1.95 0.00 3.00 5.44 3.00 12.29 15 E2a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.38 0.00 0.00 0.00 0.00 0.00 3.09 0.00 0.00 16 ER3a ExonRegion 0 0.45 0.00 0.01 0.00 0.57 0.00 0.85 0.00 0.00 0.36 0.90 0.00 0.00 2.02 0.87 5.31 0.70 3.00 0.00 0.24 8.03 3.70 3.76 17 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.00 0.00 0.00 0.00 0.00 0.00 0.00 2.32 0.00 3.26 6.24 0.00 0.00 18 I3_AR4 ActiveIntronRegion 0 12.60 8.26 6.39 3.60 4.88 0.15 6.31 1.97 0.99 0.14 1.62 7.98 0.00 1.39 0.85 4.37 0.79 1.94 0.59 0.28 2.04 2.55 2.30 19 I3_AR6 ActiveIntronRegion 0 10.58 8.13 1.23 0.00 5.35 0.79 0.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 2.13 0.00 0.30 0.00 20 ER4a ExonRegion 0 0.00 6.61 5.21 2.73 2.68 4.58 3.97 10.37 4.94 1.15 12.08 0.00 0.00 7.71 3.63 20.80 6.60 60.98 0.00 2.13 58.95 52.61 26.43 21 ER4b ExonRegion 0 1.74 34.48 9.73 9.25 9.52 9.38 9.95 16.12 11.94 5.14 26.71 7.08 7.14 26.19 11.14 45.80 26.09 64.85 3.69 11.54 136.23 102.73 55.63 22 E4a_E5a KnownJunction 0 0.00 43.35 19.40 15.65 4.33 12.72 10.42 9.69 21.93 4.32 40.01 11.85 23.05 39.50 14.09 69.64 20.10 89.87 0.00 5.75 171.19 73.48 74.18 23 ER5a ExonRegion 1 14.85 47.63 17.47 12.25 8.10 17.84 10.61 16.86 16.60 7.56 36.66 11.58 9.26 52.78 17.10 98.39 30.32 83.65 9.42 11.91 185.50 172.55 103.04 24 E5a_E6a KnownJunction 1 6.59 36.70 18.21 15.68 14.18 19.36 20.93 12.57 20.78 5.91 32.27 0.00 40.42 35.26 13.35 80.92 29.17 77.23 7.72 11.51 149.93 125.59 84.59 25 ER6a ExonRegion 0 12.45 49.82 16.43 9.23 11.19 16.48 16.35 16.32 12.77 8.72 50.19 17.19 12.20 48.11 28.82 81.43 42.65 79.11 1.02 10.25 161.32 148.20 78.82 26 E6a_E7a KnownJunction 0 21.56 68.94 21.38 6.63 10.70 20.16 10.29 14.66 12.24 15.12 40.33 31.36 6.82 71.16 39.80 124.16 51.99 102.18 7.62 14.70 162.91 168.58 130.09 27 ER7a ExonRegion 0 10.98 56.00 25.20 12.57 9.06 13.74 11.52 19.02 13.01 13.72 37.33 30.48 21.34 52.01 26.35 76.91 38.32 92.44 5.87 14.86 167.77 153.81 89.91 28 E7a_E8a KnownJunction 0 20.45 58.87 20.43 14.05 11.97 26.58 18.02 13.06 17.33 7.39 24.43 45.01 13.31 69.93 34.12 65.28 19.54 100.15 3.67 14.51 186.81 145.31 131.54 29 I7 Intron 0 2.83 27.42 3.05 5.56 3.75 1.35 2.03 2.75 2.70 6.16 3.10 6.95 6.81 2.42 1.85 2.38 1.32 4.36 2.13 9.80 2.50 2.78 2.35 30 I7_SR1 SilentIntronRegion 0 2.83 27.49 3.06 5.57 3.76 1.35 2.04 2.76 2.71 6.18 3.10 6.97 6.83 2.43 1.85 2.39 1.33 4.37 2.13 9.83 2.51 2.79 2.36 31 E8_Aa NovelBoundary 0 14.67 24.21 3.08 5.73 12.39 19.59 12.01 2.05 6.02 12.71 4.90 0.00 0.00 10.30 9.77 16.92 9.54 24.42 3.58 30.42 5.07 5.27 3.84 32 ER8a ExonRegion 0 18.87 52.55 26.96 8.96 5.57 26.95 10.97 24.65 22.54 14.74 36.43 25.91 25.21 50.02 26.11 64.00 31.23 95.40 9.20 24.92 145.83 125.50 79.10 33 E8_Da NovelBoundary 0 6.82 24.40 5.06 7.16 22.41 2.56 3.49 3.90 6.19 12.71 0.00 0.00 0.00 0.00 0.00 3.93 4.39 13.02 7.91 17.45 8.77 0.00 0.00 34 E8a_E9a KnownJunction 0 38.15 74.46 35.42 3.80 4.16 32.25 17.14 19.67 15.05 12.52 60.17 37.06 47.56 73.58 28.31 84.76 43.57 109.40 8.66 11.89 149.87 190.86 87.67 35 ER9a ExonRegion 0 27.20 92.45 33.93 16.52 16.19 32.54 22.25 33.85 21.04 22.09 61.95 43.95 37.95 72.40 39.73 107.82 42.67 103.09 15.65 24.77 180.42 209.32 98.19 36 E9a_E10a KnownJunction 1 20.08 120.64 48.34 14.45 10.78 44.52 20.80 44.61 28.01 22.70 60.70 84.48 33.76 79.29 48.95 145.09 21.97 90.08 8.09 8.63 160.87 265.81 173.12 37 E10_Aa NovelBoundary 0 17.11 14.67 4.49 2.06 0.00 0.00 2.25 1.64 8.54 12.60 19.69 12.60 6.82 4.36 4.45 7.86 0.00 8.54 7.72 25.06 2.47 0.00 3.84 38 ER10a ExonRegion 0 58.04 195.42 48.26 23.88 26.14 29.09 32.72 44.40 26.26 22.68 47.35 55.39 47.18 55.02 56.52 79.96 36.34 66.09 12.66 24.52 107.60 206.79 75.62 39 IG40 Intergenic 0 10.07 28.31 6.97 7.88 9.51 4.04 3.89 5.68 5.19 5.12 3.80 4.24 3.51 3.69 5.71 3.93 3.59 8.45 2.71 8.13 12.62 17.63 10.87 40 IG40_AR1 ActiveIntergenicRegion 0 15.15 38.69 9.53 10.04 12.24 4.99 4.71 7.96 6.80 4.18 5.27 5.97 3.86 5.49 8.03 5.76 5.03 11.50 1.32 7.94 19.34 27.72 16.28