Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C12orf72 Gene 0 16.59 20.77 8.10 26.06 28.20 13.67 12.08 14.14 23.42 8.49 2.36 5.78 5.00 4.60 6.51 6.74 4.80 8.80 8.98 15.38 7.52 7.29 8.19 2 412352 Transcript 0 0.56 9.79 9.56 8.09 11.37 10.72 8.09 2.78 5.35 8.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.62 8.53 8.99 1.17 1.16 0.00 3 395763 Transcript 0 0.92 0.60 0.26 0.59 1.55 2.15 0.19 0.01 0.53 0.00 0.00 0.00 0.00 0.19 0.72 0.00 1.95 0.00 0.92 0.00 7.48 0.60 2.56 4 357721 Transcript 0 7.71 7.32 6.10 13.44 16.44 8.80 5.37 4.24 8.57 4.02 0.57 1.81 1.69 1.95 1.71 4.00 1.02 6.01 3.76 8.24 6.97 3.64 4.50 5 IG44 Intergenic 0 2.48 29.07 26.87 27.87 30.23 16.91 17.71 16.30 13.99 28.61 0.00 0.18 0.00 0.02 0.09 0.10 0.00 14.11 13.78 15.32 0.76 0.88 1.41 6 IG44_SR1 SilentIntergenicRegion 0 2.49 29.08 26.89 27.89 30.24 16.92 17.72 16.31 14.00 28.62 0.00 0.18 0.00 0.02 0.09 0.10 0.00 14.12 13.78 15.32 0.76 0.88 1.41 7 ER1a ExonRegion 0 1.12 19.57 19.12 16.18 22.74 21.43 16.18 5.56 10.69 16.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.24 17.05 17.97 2.34 2.32 0.00 8 E1_Da NovelBoundary 0 3.33 64.59 62.74 65.69 125.98 102.61 65.23 34.50 28.41 59.77 0.00 0.00 0.00 0.00 4.45 0.00 0.00 34.78 61.93 57.14 8.90 0.00 0.00 9 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2a ExonRegion 0 1.84 1.20 0.53 1.18 3.10 1.74 0.38 0.03 1.07 0.00 0.00 0.00 0.00 0.39 1.43 0.00 0.17 0.00 1.85 0.00 3.77 1.21 1.12 11 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.74 0.00 0.00 0.00 11.18 0.00 4.01 12 ER3a ExonRegion 0 7.41 3.05 3.39 7.47 14.03 7.89 4.47 0.00 2.69 3.01 0.00 0.00 0.00 2.05 1.02 7.43 0.00 6.29 4.78 5.94 14.35 2.90 4.40 13 E3a_E4a KnownJunction 0 0.00 0.00 7.48 7.46 8.40 4.66 1.85 0.00 1.07 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.44 0.00 5.31 2.84 2.57 3.50 14 I3_SR2 SilentIntronRegion 0 8.13 3.46 0.42 10.36 23.11 7.74 1.05 10.15 12.37 0.79 0.45 0.43 0.90 0.00 0.00 0.04 0.00 1.07 0.00 1.55 0.00 2.44 0.00 15 E4_Aa NovelBoundary 0 3.33 3.09 10.59 19.11 7.30 0.00 3.93 6.08 16.15 1.32 0.00 5.70 0.00 2.47 5.93 0.00 0.00 9.45 0.00 0.00 0.00 0.00 4.35 16 ER4a ExonRegion 0 8.08 14.35 8.89 27.13 27.62 7.91 8.88 19.66 27.85 7.24 1.15 1.64 0.46 3.40 3.02 3.76 1.59 15.05 7.06 14.22 21.60 8.02 9.65 17 E4_Da NovelBoundary 0 3.78 16.12 1.83 22.54 4.33 2.38 3.93 29.74 32.49 4.81 0.00 0.00 0.00 0.00 4.45 0.00 0.00 2.57 0.00 2.68 8.15 0.00 7.60 18 E4a_E5a KnownJunction 0 5.93 2.89 5.47 9.06 11.29 0.00 4.46 12.77 6.19 3.92 0.00 0.00 0.00 2.41 4.45 7.43 3.93 6.55 3.67 3.20 19.77 12.31 4.10 19 I4 Intron 0 9.01 14.35 4.27 18.77 20.83 5.34 4.16 14.02 22.79 4.98 0.52 1.64 0.87 0.29 1.54 0.80 0.25 3.49 2.81 6.93 1.01 0.96 3.38 20 I4_SR1 SilentIntronRegion 0 9.02 14.37 4.28 18.80 20.86 5.35 4.17 14.04 22.82 4.99 0.52 1.64 0.87 0.29 1.55 0.80 0.25 3.50 2.81 6.95 1.02 0.96 3.38 21 E5_Aa NovelBoundary 0 0.00 3.35 10.82 20.38 67.06 11.87 9.85 34.34 38.86 13.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.22 4.14 5.82 2.59 0.00 0.00 22 ER5a ExonRegion 0 16.90 21.76 6.58 26.82 18.02 5.71 6.83 21.10 23.01 14.93 1.51 4.30 3.94 5.47 3.81 9.55 3.23 3.48 12.84 10.51 12.90 8.95 9.37 23 E5_Da NovelBoundary 0 46.38 25.00 6.21 35.39 44.74 28.39 21.99 36.39 60.53 9.97 0.00 13.20 0.00 4.94 0.00 7.35 0.00 6.67 8.85 24.74 0.00 11.08 16.30 24 E5a_E6a KnownJunction 0 6.96 5.85 3.08 11.42 14.86 0.00 1.72 3.98 7.12 7.15 0.00 0.00 6.66 2.47 4.45 0.00 4.21 1.91 0.00 8.82 7.91 6.12 0.00 25 E6_Aa NovelBoundary 0 6.82 15.19 6.86 20.51 3.57 2.10 1.99 14.79 17.85 5.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.78 0.00 2.68 0.00 0.00 0.00 26 ER6a ExonRegion 0 25.05 31.50 10.37 32.58 37.46 16.97 21.61 19.15 31.38 12.31 5.28 9.64 7.60 8.13 15.98 14.70 12.04 12.84 16.78 23.92 13.80 13.51 16.61 27 E6_Da KnownBoundary 0 2.82 10.92 10.05 36.46 11.46 8.52 3.44 11.58 33.19 6.85 2.16 0.00 0.00 4.59 4.94 0.00 3.83 1.78 3.67 7.99 0.00 5.94 7.09 28 ER6b ExonRegion 0 15.71 18.92 7.44 25.39 26.87 13.84 9.80 12.71 21.94 7.38 1.70 5.43 5.06 3.80 4.10 4.57 3.05 7.30 6.50 13.47 3.72 5.44 5.59