Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	AEBP2	Gene	0	47.55	88.99	48.56	65.12	87.07	51.67	72.35	55.24	46.95	48.43	94.24	165.69	113.89	81.44	63.57	62.54	64.19	37.15	27.80	44.86	38.98	77.29	39.41
2	398864	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	266508	Transcript	0	38.81	55.56	32.34	42.19	68.14	52.20	74.87	44.88	40.17	39.35	96.49	238.58	160.95	102.74	43.91	69.46	70.74	21.67	26.16	51.32	20.12	87.50	44.02
4	435841	Transcript	1	2.89	0.00	6.89	2.60	0.00	6.47	11.70	10.93	6.63	10.42	37.69	0.00	11.53	30.67	4.82	12.82	57.04	29.93	10.82	12.27	37.31	0.00	9.73
5	360995	Transcript	0	9.83	5.08	3.68	5.32	2.14	4.77	6.09	7.07	7.41	5.28	20.88	7.99	4.22	16.73	14.51	17.83	14.52	13.86	5.42	9.15	12.34	8.96	13.51
6	ER1a	ExonRegion	0	0.00	0.00	0.18	0.00	1.29	0.00	0.00	0.00	0.00	0.00	5.80	0.00	0.00	6.50	2.69	2.75	2.20	1.30	0.24	0.00	3.18	1.93	0.00
7	ER1b	ExonRegion	0	8.16	1.83	3.12	1.91	2.02	3.17	1.72	1.11	1.59	2.98	23.69	3.19	6.60	19.76	9.47	13.60	16.39	19.86	11.04	7.12	24.18	3.27	20.11
8	E1_Da	KnownBoundary	0	2.89	0.00	0.00	1.73	6.62	35.77	17.22	0.00	0.00	0.00	18.74	17.56	6.33	25.66	0.00	13.33	15.15	1.62	18.35	22.88	9.64	9.55	10.33
9	E1a_E1c	KnownJunction	1	2.89	0.00	6.89	2.60	0.00	6.47	11.70	10.93	6.63	10.42	37.69	0.00	11.53	30.67	4.82	12.82	57.04	29.93	10.82	12.27	37.31	0.00	9.73
10	ER1c	ExonRegion	0	1.17	1.57	10.02	8.06	1.86	6.47	4.53	6.47	4.82	10.65	56.06	12.01	18.34	46.54	31.33	27.44	39.58	30.77	12.20	14.66	40.05	7.52	22.56
11	E1_Ac	KnownBoundary	1	7.04	0.00	19.60	13.88	3.65	27.14	34.71	22.84	7.61	22.46	126.77	0.00	26.62	94.00	63.29	71.18	129.50	85.93	26.54	23.01	100.39	6.25	42.43
12	ER1d	ExonRegion	1	14.89	15.03	17.01	14.66	10.82	18.38	17.56	17.58	17.13	22.54	96.12	19.65	27.05	92.64	69.15	62.53	72.47	59.92	24.32	30.25	85.79	25.82	41.99
13	E1_Db	NovelBoundary	0	3.56	0.00	5.20	5.13	0.00	0.00	0.00	8.21	1.56	19.23	35.59	0.00	0.00	6.89	14.96	18.80	3.83	13.89	27.11	2.56	8.22	14.70	22.28
14	E1b_E3b	KnownJunction	1	89.94	60.78	28.38	70.55	35.82	68.77	59.22	56.19	69.13	49.78	206.47	61.97	45.13	188.71	134.12	148.59	138.48	153.34	79.06	86.10	116.57	80.28	139.40
15	E1b_E4a	NovelJunction	0	7.04	0.00	1.21	4.30	34.30	11.19	15.06	11.01	2.49	3.28	2.53	0.00	0.00	2.41	0.00	8.12	13.74	11.86	0.00	0.00	5.37	5.08	14.94
16	I1_SR1	SilentIntronRegion	1	2.94	1.26	7.89	3.77	1.31	4.00	2.38	3.77	3.39	9.40	20.39	0.87	3.97	5.88	4.78	6.53	4.71	10.27	8.69	2.97	3.21	4.42	4.59
17	I1_AR1	ActiveIntronRegion	1	5.63	9.89	22.09	15.52	6.33	5.58	11.89	3.83	3.59	6.60	28.11	6.83	3.11	6.78	5.98	6.40	11.23	4.33	5.14	7.90	3.02	3.93	7.68
18	I1_AR1	ActiveIntronRegion	0	13.71	13.73	1.45	3.47	11.25	4.62	2.11	1.97	0.96	1.13	15.13	13.98	19.73	16.59	12.52	16.41	10.82	1.59	14.77	7.80	3.49	7.19	15.13
19	I1_SR2	SilentIntronRegion	0	2.63	5.23	3.98	14.22	9.69	11.52	23.72	3.46	2.81	3.33	0.30	3.24	9.46	0.35	1.30	4.25	2.16	2.31	4.04	6.24	1.01	0.00	1.70
20	I1_AR3	ActiveIntronRegion	0	3.53	6.78	3.02	23.17	6.96	16.81	10.50	7.32	3.62	5.28	0.00	14.00	2.50	0.00	0.10	2.38	2.97	3.20	3.19	10.57	0.00	0.00	2.94
21	ER2a	ExonRegion	0	0.19	0.00	0.00	0.00	0.00	0.00	0.00	0.31	0.00	0.00	0.00	0.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E3_Ab	NovelBoundary	0	0.00	0.00	0.00	3.63	4.16	5.56	34.93	12.82	1.45	0.00	0.00	0.00	0.00	0.00	0.00	3.42	3.74	0.00	0.00	5.94	0.00	0.00	0.00
23	ER3a	ExonRegion	0	19.47	10.17	7.35	10.63	4.28	9.54	12.18	13.83	14.82	10.55	41.75	15.59	8.44	33.46	29.01	35.67	29.05	27.72	10.83	18.30	24.68	17.92	27.02
24	ER3b	ExonRegion	0	92.47	80.77	61.91	83.64	55.21	51.78	75.17	57.21	79.81	72.91	244.74	131.79	93.60	184.89	119.20	195.63	164.85	154.67	76.06	106.94	159.61	99.11	119.45
25	E3a_E4a	KnownJunction	0	34.67	40.91	50.80	79.24	135.91	55.03	89.39	70.65	68.78	86.23	240.01	135.19	145.45	214.38	82.58	230.45	122.86	95.09	118.22	94.79	140.85	134.84	126.34
26	I3_AR2	ActiveIntronRegion	0	6.07	16.68	4.25	23.90	24.80	3.67	26.92	7.72	3.54	12.62	2.83	21.65	6.57	0.00	8.51	0.00	3.30	3.70	0.00	14.04	0.00	0.00	0.00
27	I3_AR3	ActiveIntronRegion	0	6.30	7.16	3.25	19.16	6.36	2.84	7.05	7.58	4.68	3.33	0.69	3.07	7.16	0.64	5.88	6.43	2.47	2.26	3.55	5.22	0.74	0.00	3.79
28	I3_AR5	ActiveIntronRegion	0	8.16	6.96	3.34	11.94	11.85	2.52	23.50	3.28	3.87	3.14	0.84	3.01	10.43	1.79	3.82	2.71	6.52	1.39	3.22	6.16	1.26	1.54	1.81
29	ER4a	ExonRegion	0	65.24	52.33	80.93	131.20	130.05	77.02	97.14	86.60	93.94	99.70	281.76	279.93	222.56	296.48	147.61	289.34	183.81	233.96	109.51	118.54	187.58	169.19	185.44
30	E4a_E5a	KnownJunction	0	86.09	74.00	105.73	148.33	116.47	90.86	93.58	125.48	126.19	146.29	288.92	350.66	202.75	346.17	267.26	309.83	253.76	289.72	132.80	151.74	230.24	200.29	248.49
31	ER5a	ExonRegion	0	118.03	105.10	73.33	140.36	128.72	103.99	117.44	105.89	120.67	107.66	362.66	290.70	321.61	282.35	153.63	263.93	275.95	190.12	110.57	130.53	254.18	156.94	180.34
32	E5a_E6a	KnownJunction	0	242.12	117.54	56.00	138.08	221.22	204.14	186.19	83.42	125.61	82.92	320.45	408.73	471.40	280.24	283.33	233.36	268.35	130.99	111.72	133.46	226.54	160.55	191.13
33	E6_Aa	NovelBoundary	0	39.64	9.93	3.61	12.72	0.00	7.78	34.80	9.82	1.39	4.54	0.00	5.70	7.30	0.00	4.70	0.00	4.77	0.00	0.00	2.43	0.00	0.00	0.00
34	ER6a	ExonRegion	0	99.61	90.08	73.41	117.24	173.41	106.92	132.23	87.57	113.05	73.48	286.80	339.81	341.92	226.71	124.96	189.79	210.68	95.74	104.94	100.83	143.35	136.90	132.27
35	E6a_E7a	KnownJunction	0	93.13	68.80	74.42	130.09	155.60	67.23	129.44	80.63	118.43	105.92	311.08	352.31	361.83	267.12	136.35	173.54	213.37	78.39	128.57	111.34	126.77	157.74	100.64
36	I6_AR1	ActiveIntronRegion	0	11.07	9.35	3.33	13.78	10.44	4.13	14.71	7.30	3.97	4.47	0.00	2.11	8.00	0.00	1.78	2.55	0.00	2.06	0.92	5.36	0.00	0.58	0.82
37	ER7a	ExonRegion	0	66.73	70.10	67.09	125.43	114.15	85.11	103.17	69.01	102.33	89.39	346.87	429.13	423.48	205.02	86.74	183.05	229.02	87.25	87.88	83.92	122.57	150.72	98.77
38	E7_Da	NovelBoundary	0	0.00	0.00	6.12	11.65	4.33	0.00	6.45	10.76	6.31	9.51	5.32	12.60	7.63	0.00	9.52	4.02	4.11	6.76	19.67	12.14	0.00	0.00	4.18
39	E7a_E8a	KnownJunction	0	54.16	87.09	75.25	139.04	111.29	69.85	70.44	99.03	88.22	76.96	256.22	417.89	345.43	183.12	75.53	166.79	190.56	81.25	64.00	61.55	87.97	109.00	103.37
40	E7a_E9a	NovelJunction	0	3.48	0.00	1.24	0.00	0.00	5.45	3.84	3.98	5.90	1.56	5.26	13.50	0.00	4.71	0.00	8.72	4.39	0.00	0.00	3.26	7.78	10.47	11.10
41	E8_Aa	NovelBoundary	0	0.00	3.09	5.09	12.75	0.00	0.00	13.03	16.31	9.03	4.46	0.00	5.85	0.00	0.00	0.00	0.00	3.83	3.15	3.76	6.14	0.00	0.00	0.00
42	ER8a	ExonRegion	0	89.90	79.52	63.92	106.27	126.14	120.48	114.23	88.89	98.57	104.48	303.38	422.58	301.03	200.98	123.10	183.96	200.08	78.74	88.38	79.53	93.60	148.48	105.05
43	E8_Da	NovelBoundary	0	0.00	0.00	12.18	30.27	3.23	0.00	23.23	22.88	18.78	8.76	1.95	6.30	0.00	2.47	0.00	7.69	4.77	0.00	9.13	23.46	6.18	2.69	0.00
44	E8a_E9a	KnownJunction	0	120.39	84.52	54.55	99.32	148.81	117.09	128.29	66.62	64.55	81.02	277.60	317.65	159.57	189.71	95.68	156.88	191.68	29.35	76.90	64.30	112.25	116.28	68.89
45	I8	Intron	0	4.38	13.13	7.13	18.15	10.25	5.43	22.46	10.61	10.60	7.91	2.70	6.28	9.49	1.45	3.68	4.37	2.15	7.71	6.06	12.15	3.87	5.82	4.32
46	I8_SR1	SilentIntronRegion	0	4.39	13.15	7.13	18.18	10.26	5.44	22.49	10.63	10.61	7.92	2.70	6.29	9.50	1.45	3.68	4.37	2.15	7.72	6.07	12.17	3.88	5.83	4.32
47	E9_Aa	NovelBoundary	0	25.86	20.19	13.16	25.50	27.59	7.89	33.21	20.74	18.58	9.80	8.74	0.00	6.82	0.00	0.00	0.00	9.54	0.00	7.34	5.94	3.15	0.00	3.59
48	ER9a	ExonRegion	0	73.29	81.12	51.56	85.36	95.83	106.97	112.29	64.79	60.15	73.15	256.22	296.65	159.98	153.27	62.65	122.74	167.00	26.83	49.31	66.04	75.42	107.80	69.17
49	ER9b	ExonRegion	0	38.81	55.56	32.34	42.19	68.14	52.20	74.87	44.88	40.17	39.35	96.49	238.58	160.95	102.74	43.91	69.46	70.74	21.67	26.16	51.32	20.12	87.50	44.02
50	E9_Ab	KnownBoundary	1	48.01	106.82	46.21	61.46	77.59	70.81	61.92	53.72	47.77	55.20	120.29	212.32	60.22	102.71	80.23	65.28	126.23	25.74	16.66	42.89	13.78	76.48	48.14
51	ER9c	ExonRegion	0	46.17	112.12	53.82	68.51	99.99	51.07	76.98	59.67	43.20	47.03	51.50	156.71	92.41	47.22	55.62	29.64	32.22	13.70	14.66	34.58	8.20	74.03	17.38
52	IG15_SR1	SilentIntergenicRegion	0	5.77	11.78	1.99	19.36	6.08	2.20	11.98	5.62	5.57	4.02	0.73	3.00	3.61	0.60	2.40	2.84	1.30	3.60	3.68	10.09	1.07	0.45	2.72
53	IG15_AR2	ActiveIntergenicRegion	0	3.84	10.89	1.73	18.29	7.48	2.46	7.42	3.93	3.80	5.11	2.13	4.89	2.51	0.07	0.69	2.39	1.30	2.77	2.49	6.95	0.49	0.93	3.02
54	IG15_SR2	SilentIntergenicRegion	0	5.72	9.92	2.27	19.13	5.36	2.63	8.09	4.49	5.15	3.05	0.53	3.65	4.54	0.63	2.21	3.31	1.41	5.58	2.37	8.06	2.04	0.67	3.14
55	IG15_SR3	SilentIntergenicRegion	0	2.89	6.17	0.50	17.16	1.58	1.08	8.64	4.08	2.71	3.24	2.29	5.83	3.04	0.43	0.80	4.57	1.52	5.46	0.74	7.63	1.77	0.25	2.78
56	IG15_AR5	ActiveIntergenicRegion	0	5.08	13.16	0.00	15.72	2.45	1.40	6.04	1.67	3.18	3.90	1.14	3.70	1.83	0.69	0.53	5.99	1.29	10.42	6.09	10.03	8.37	0.27	3.88
57	IG15_SR4	SilentIntergenicRegion	0	9.30	12.42	2.26	24.72	7.10	3.46	8.99	3.96	5.51	4.44	1.67	4.92	4.66	0.27	1.95	3.77	1.31	6.39	2.90	8.95	2.88	1.31	4.65
58	IG15_AR6	ActiveIntergenicRegion	0	10.37	16.85	6.42	42.66	12.32	2.42	8.52	7.31	9.49	5.30	1.68	4.38	6.19	1.11	4.30	4.60	2.39	10.06	5.35	8.87	1.42	1.08	2.37
59	IG15_AR7	ActiveIntergenicRegion	0	18.81	28.10	4.24	37.47	18.95	3.90	12.89	11.40	6.93	7.02	10.61	10.24	7.77	6.94	10.77	8.42	7.01	9.93	1.74	10.96	10.18	7.41	2.62
60	IG15_SR6	SilentIntergenicRegion	0	58.57	18.51	14.34	58.76	30.24	4.17	14.91	19.10	14.03	11.00	11.62	7.31	11.02	4.45	12.29	15.79	9.16	12.82	8.72	6.06	5.04	7.55	8.63
61	IG15_SR7	SilentIntergenicRegion	0	19.26	16.72	6.02	31.67	13.81	3.75	10.29	10.57	9.35	7.25	7.74	8.48	5.89	4.01	4.84	6.58	4.21	10.57	4.64	9.39	6.27	5.98	6.05
62	IG15_AR10	ActiveIntergenicRegion	0	20.14	9.58	1.98	22.49	11.16	7.27	6.39	9.30	8.31	4.96	7.07	2.11	1.48	2.76	3.29	7.96	4.42	15.51	4.51	11.17	10.59	7.79	12.36
63	IG15_SR9	SilentIntergenicRegion	0	9.86	9.64	2.29	18.70	12.97	1.43	6.59	2.10	2.87	1.63	1.18	1.41	1.05	0.25	0.72	0.71	0.34	4.02	3.13	4.76	1.35	0.78	1.59
64	IG15_AR12	ActiveIntergenicRegion	0	0.00	0.64	9.42	16.50	0.99	7.82	4.88	0.00	2.93	0.48	1.32	0.00	0.00	0.00	0.00	2.97	0.00	0.00	2.51	6.38	0.00	3.40	0.00
65	IG15_SR12	SilentIntergenicRegion	0	9.07	18.36	1.91	19.85	8.08	2.59	4.79	2.23	3.19	1.88	1.54	1.05	0.00	0.00	0.00	0.82	0.00	2.17	2.32	3.58	1.55	1.32	0.00
66	IG15_AR15	ActiveIntergenicRegion	0	6.74	19.39	0.50	21.74	4.16	0.07	2.37	2.99	4.33	2.60	0.25	0.47	0.00	0.21	0.00	0.36	0.00	0.79	0.21	2.33	0.50	2.26	0.00