Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC38A2 Gene 0 118.20 277.21 52.60 200.66 252.81 294.07 155.97 154.31 218.97 188.21 374.30 391.89 602.59 329.83 106.28 278.07 365.00 138.31 83.44 213.44 292.36 709.42 394.95 2 256689 Transcript 0 49.73 172.01 31.77 126.73 173.10 286.67 128.50 133.58 215.79 171.95 431.13 477.79 708.14 362.80 75.74 296.94 419.34 143.09 83.83 256.29 288.15 853.08 460.21 3 395444 Transcript 0 0.00 28.94 1.57 18.15 15.87 14.03 11.61 11.42 36.75 23.85 91.92 92.73 146.91 53.39 13.35 77.42 79.38 32.33 30.40 64.56 44.67 89.65 43.96 4 ER1a ExonRegion 0 40.83 77.11 7.64 34.84 53.62 260.71 71.65 50.19 74.43 75.00 250.87 92.02 132.23 203.12 36.72 213.24 217.70 120.83 59.22 127.07 370.13 193.48 406.67 5 E1_Ab KnownBoundary 1 28.52 94.59 22.26 163.65 79.03 327.43 102.77 197.16 221.29 244.42 336.03 398.23 694.27 911.24 180.73 1190.71 298.27 500.26 275.02 399.74 486.37 908.71 2209.20 6 ER1b ExonRegion 1 10.58 72.41 22.54 160.70 43.34 167.56 48.47 179.70 257.90 235.98 352.44 281.34 350.24 745.91 231.06 1109.61 380.96 573.53 285.20 421.92 556.71 1808.38 1747.41 7 E1a_E2a KnownJunction 1 16.67 58.15 32.38 153.26 72.92 180.98 42.62 173.66 339.64 250.30 483.86 121.69 195.93 409.50 124.85 596.17 557.36 572.26 187.96 395.65 827.14 1260.25 1029.14 8 ER2a ExonRegion 0 47.58 148.03 29.69 133.93 147.64 445.34 151.70 187.43 322.57 256.93 639.44 313.29 469.61 531.43 119.05 459.55 724.64 325.91 125.40 385.41 1054.54 1081.81 664.61 9 E2a_E3a KnownJunction 0 49.64 182.93 34.77 130.52 269.69 414.36 182.52 188.04 302.83 272.68 652.48 344.21 579.02 560.90 146.49 423.82 798.50 310.69 90.64 451.70 753.50 841.84 635.61 10 ER3a ExonRegion 0 35.15 178.53 23.09 144.53 230.31 355.13 183.05 190.13 300.90 247.70 722.39 464.10 842.03 589.42 109.04 443.50 822.69 245.16 105.47 395.22 705.08 1120.22 624.32 11 E3_Da NovelBoundary 0 7.11 0.00 2.19 8.76 7.39 7.38 21.64 12.53 28.10 20.74 105.13 72.32 112.33 76.70 17.06 47.77 48.25 30.34 3.95 32.15 112.00 150.82 34.66 12 E3a_E4a KnownJunction 0 19.48 210.42 32.67 147.73 193.89 381.71 175.72 192.68 301.33 214.68 593.62 516.62 1017.47 534.17 119.54 385.88 610.85 212.90 121.60 378.01 411.13 1252.65 567.92 13 E3a_E5a KnownJunction 0 0.00 28.94 1.57 18.15 15.87 14.03 11.61 11.42 36.75 23.85 91.92 92.73 146.91 53.39 13.35 77.42 79.38 32.33 30.40 64.56 44.67 89.65 43.96 14 ER4a ExonRegion 0 29.78 178.34 43.50 161.96 240.49 370.17 165.53 174.98 314.04 235.96 655.97 714.70 964.85 567.90 91.41 458.17 679.87 234.98 113.19 374.96 442.15 1226.65 684.19 15 E4_Da NovelBoundary 0 7.41 2.76 3.10 22.64 8.66 30.89 41.25 10.76 27.05 18.05 97.81 146.60 267.35 86.11 22.62 44.01 67.98 0.00 4.80 38.86 52.70 111.87 35.77 16 E4a_E5a KnownJunction 0 39.86 162.80 33.94 185.79 280.90 351.73 178.90 176.13 325.63 263.78 617.84 949.81 1248.13 463.42 76.89 405.36 565.50 139.37 113.70 373.08 207.02 1365.87 606.93 17 I4 Intron 0 13.66 12.28 3.61 19.85 33.26 32.88 32.83 14.97 32.06 20.50 94.79 84.68 102.11 72.41 10.89 41.72 66.42 17.37 8.47 31.45 85.56 177.11 75.42 18 I4_AR1 ActiveIntronRegion 0 9.43 12.67 2.86 19.66 33.09 35.56 34.25 16.04 37.88 25.45 97.11 106.14 163.92 76.53 13.56 41.29 71.74 13.44 6.47 29.84 70.28 216.82 74.27 19 I4_SR1 SilentIntronRegion 1 16.93 12.20 2.45 16.35 69.57 67.62 75.63 36.30 56.35 35.55 146.90 153.15 202.26 153.28 15.59 89.54 132.04 18.48 13.14 58.51 80.71 702.15 188.68 20 I4_AR2 ActiveIntronRegion 0 15.96 10.01 1.70 16.77 66.89 55.44 78.11 33.77 56.53 36.88 155.08 155.86 213.22 155.67 28.57 77.05 118.07 21.46 12.74 53.35 87.30 675.70 190.20 21 I4_AR3 ActiveIntronRegion 0 14.82 9.88 1.75 19.08 61.54 52.39 72.82 32.35 60.52 31.62 145.80 146.58 222.44 149.88 29.01 70.06 107.51 24.02 12.74 44.98 109.56 642.62 180.81 22 I4_AR4 ActiveIntronRegion 0 7.94 6.10 3.52 13.12 38.13 22.69 40.22 20.74 43.85 23.94 115.49 108.24 194.64 107.39 17.04 47.18 83.35 14.32 4.38 36.97 94.76 228.41 103.52 23 I4_AR5 ActiveIntronRegion 1 8.47 5.42 3.68 12.72 21.41 13.14 33.76 13.83 36.85 18.92 89.24 92.36 177.44 85.54 7.74 36.16 74.27 15.40 3.19 31.91 84.84 129.87 76.35 24 I4_AR6 ActiveIntronRegion 1 9.52 8.13 3.68 12.10 24.08 17.42 38.89 11.45 37.36 18.21 100.03 90.38 198.15 81.82 2.90 52.38 66.84 18.25 3.19 32.98 86.22 150.79 89.93 25 I4_AR7 ActiveIntronRegion 1 12.70 8.13 3.68 10.90 26.76 23.32 42.75 10.37 36.52 17.20 97.75 103.29 172.19 81.67 3.32 56.47 61.77 16.63 3.19 42.25 82.17 145.85 88.52 26 I4_AR8 ActiveIntronRegion 1 13.30 6.97 3.68 9.54 13.38 23.84 39.15 5.19 25.41 13.76 89.47 108.24 160.13 84.69 9.53 56.89 47.16 14.78 9.56 40.43 58.87 111.02 84.32 27 I4_AR9 ActiveIntronRegion 0 9.00 6.10 3.68 9.03 10.70 23.15 33.60 5.19 21.77 11.90 72.48 93.08 127.22 76.54 14.51 36.78 39.20 13.86 8.36 35.11 45.45 93.24 66.81 28 I4_AR13 ActiveIntronRegion 1 13.28 12.31 3.62 18.69 30.98 29.72 30.33 14.09 30.87 18.39 97.83 80.15 74.20 68.88 8.83 40.59 62.91 18.97 8.16 31.15 89.82 156.21 72.65 29 I4_SR3 SilentIntronRegion 1 23.39 13.02 6.64 31.68 42.18 43.32 36.49 18.99 31.27 24.49 86.64 65.30 90.92 79.91 13.35 44.49 77.55 23.52 14.85 34.10 125.21 164.08 84.88 30 I4_AR19 ActiveIntronRegion 0 31.59 17.73 2.93 29.68 59.90 48.47 44.72 15.12 21.55 14.93 63.84 51.37 64.33 51.85 16.24 41.48 61.24 7.78 9.84 35.79 45.69 173.37 62.02 31 E5_Aa NovelBoundary 0 54.01 47.29 8.25 32.26 115.11 35.38 54.85 23.21 44.24 38.41 65.02 122.74 109.90 75.23 4.45 25.21 68.82 20.44 4.80 43.02 23.78 154.86 62.23 32 ER5a ExonRegion 0 49.91 191.40 53.25 207.71 295.45 390.72 246.61 219.09 384.00 288.54 643.11 981.97 1234.49 582.18 118.05 436.10 743.46 145.92 122.72 425.39 288.72 1364.28 581.46 33 E5a_E6a KnownJunction 0 107.87 303.76 55.53 233.24 388.12 472.68 315.01 243.12 387.18 308.13 574.46 965.56 1324.91 608.40 130.79 405.53 781.39 160.80 125.46 417.95 372.64 1173.91 621.70 34 ER6a ExonRegion 0 74.06 313.04 47.71 225.61 396.64 540.97 272.75 223.49 401.74 321.40 857.40 1009.84 1285.27 606.30 136.48 511.49 791.04 226.26 164.71 469.71 451.57 1452.91 803.88 35 E6a_E7a KnownJunction 0 85.13 367.89 46.80 247.62 470.71 672.57 320.05 252.19 476.67 355.41 873.59 1066.25 1273.46 591.39 100.25 574.29 861.80 199.35 177.04 582.73 551.80 1576.52 667.54 36 ER7a ExonRegion 0 83.29 279.94 47.91 246.60 390.59 545.09 279.53 252.82 444.14 332.50 888.14 1198.52 1474.16 648.28 128.50 553.69 983.22 254.65 163.46 479.03 533.00 1403.83 684.38 37 E7a_E8a KnownJunction 0 125.65 279.23 62.39 325.80 435.14 598.75 274.56 292.04 507.23 346.22 867.48 1149.67 1758.00 829.78 176.15 681.70 860.21 309.95 207.91 537.42 535.36 1594.40 919.96 38 I7 Intron 0 15.10 13.08 3.51 12.31 41.14 25.96 26.23 15.61 31.22 15.84 70.93 88.37 85.71 62.81 9.09 33.29 58.68 9.87 4.12 21.78 30.79 70.77 32.34 39 I7_AR1 ActiveIntronRegion 0 5.74 10.77 0.71 9.70 38.01 17.99 21.71 7.30 21.87 15.83 59.91 68.00 100.72 72.89 10.80 23.78 40.07 9.61 2.47 15.11 32.45 63.51 33.75 40 I7_AR2 ActiveIntronRegion 0 13.31 13.14 3.06 13.63 40.27 28.03 30.51 16.03 30.46 15.99 73.18 103.48 102.85 57.48 9.91 32.49 71.54 10.58 6.31 31.77 24.92 69.43 30.39 41 I7_AR3 ActiveIntronRegion 1 21.62 14.49 5.39 13.28 43.62 29.62 26.90 20.38 37.18 15.75 76.60 93.63 69.12 59.49 7.74 39.37 63.75 9.71 4.07 21.07 32.73 75.82 32.56 42 ER8a ExonRegion 0 73.70 251.97 64.84 366.48 371.22 531.85 280.66 331.72 523.18 384.52 856.53 1009.44 1390.96 756.80 210.25 740.49 1068.97 244.90 193.35 618.56 619.59 1802.77 897.94 43 E8a_E9a KnownJunction 0 114.17 281.07 66.38 388.40 503.91 819.07 448.56 360.22 562.44 455.98 880.91 1090.11 1562.40 818.53 297.55 849.01 1016.83 207.52 236.71 643.39 608.32 1770.87 1051.16 44 ER9a ExonRegion 0 99.08 265.26 50.01 328.76 479.50 635.61 345.67 302.30 551.07 431.12 1003.63 1054.78 1448.66 785.91 201.22 774.97 1147.03 315.21 219.52 642.66 736.97 1738.47 923.35 45 E9a_E10a KnownJunction 0 109.80 363.09 52.63 359.83 630.05 764.28 349.81 306.00 545.39 423.80 1062.37 1161.68 1826.18 698.51 164.91 676.49 1187.19 342.16 170.36 679.57 826.15 1438.56 796.69 46 ER10a ExonRegion 0 101.15 341.29 63.98 404.10 441.58 651.85 322.47 324.67 553.22 440.45 1063.15 842.70 1745.70 888.29 224.16 981.76 1107.33 453.96 262.70 613.66 883.62 1709.64 1213.57 47 E10a_E11a KnownJunction 0 86.31 286.66 49.82 400.85 564.18 576.49 296.91 258.44 477.57 389.36 994.67 600.80 1292.93 704.16 132.89 700.59 1213.09 354.63 274.17 564.01 914.06 1241.39 728.57 48 ER11a ExonRegion 0 135.83 288.51 60.00 347.69 479.76 728.11 341.07 265.32 478.81 360.89 980.92 736.60 1504.74 816.06 181.22 629.53 1109.84 369.83 234.80 477.71 855.01 1188.39 858.45 49 E11a_E12a KnownJunction 0 166.33 279.23 74.66 335.92 518.08 808.34 349.86 249.94 429.22 320.68 835.79 709.28 1543.89 842.25 212.00 554.38 812.81 284.83 211.30 414.89 643.60 1171.83 918.85 50 ER12a ExonRegion 0 131.01 314.82 73.44 433.36 556.87 713.04 336.09 302.77 505.91 402.55 1014.48 911.37 2006.22 906.23 218.51 962.09 1135.21 466.04 295.70 497.68 776.16 1495.20 1378.68 51 E12a_E13a KnownJunction 0 234.56 363.75 63.10 383.57 618.00 675.58 448.96 232.44 481.07 288.74 899.28 780.85 1494.38 943.67 205.58 759.54 952.03 385.68 359.26 492.80 682.83 1343.83 1073.78 52 E12a_E14a NovelJunction 0 0.00 0.00 5.32 0.00 3.74 0.00 0.00 6.53 13.08 0.00 6.95 7.05 0.00 9.59 5.19 12.56 12.44 2.28 0.00 0.00 0.00 15.98 4.18 53 ER13a ExonRegion 0 115.39 331.59 61.66 306.67 435.83 449.50 278.85 222.78 395.75 300.25 751.05 659.12 1110.97 652.31 161.40 442.16 686.27 253.64 182.94 418.69 505.25 1056.69 659.55 54 E13a_E14a KnownJunction 0 160.92 540.23 64.37 312.78 407.05 542.24 327.47 204.92 362.06 305.12 704.70 753.55 1275.08 647.30 168.61 374.69 674.99 210.13 166.69 340.55 445.23 997.07 587.73 55 I13 Intron 0 14.19 7.41 2.22 10.17 53.67 14.76 19.93 14.89 19.84 7.54 33.83 51.31 50.88 28.09 7.72 22.18 38.69 1.40 4.83 13.59 9.71 33.66 25.41 56 I13_AR1 ActiveIntronRegion 0 17.26 8.79 2.13 10.32 63.18 12.01 20.34 15.32 21.58 6.82 28.21 63.52 46.69 28.09 7.27 20.29 36.81 1.76 4.60 10.92 6.17 38.58 24.91 57 ER14a ExonRegion 0 147.25 452.46 70.08 332.19 581.60 665.42 340.21 244.87 390.56 318.86 746.62 937.17 1482.66 684.22 179.56 488.04 677.55 243.30 195.25 398.75 469.01 1177.72 736.59 58 E14a_E15a KnownJunction 0 258.05 453.80 83.41 498.27 959.25 818.45 487.51 307.85 455.15 403.60 755.35 810.71 904.81 796.64 209.78 741.77 840.20 323.50 257.70 515.75 457.40 1492.87 1131.40 59 ER15a ExonRegion 0 188.31 373.22 84.51 421.09 759.31 767.50 453.43 256.50 406.26 333.43 749.79 773.69 1034.63 719.15 175.59 622.42 640.21 325.86 170.25 408.83 587.00 1201.23 846.05 60 E15a_E16a KnownJunction 0 336.13 523.85 91.60 400.25 738.54 687.16 446.44 254.25 411.83 331.15 733.45 787.91 1228.98 696.16 167.50 660.94 651.52 335.07 93.18 354.42 692.59 1489.75 872.92 61 ER16a ExonRegion 0 239.06 607.99 126.91 504.39 680.25 632.99 356.20 320.59 448.26 394.83 758.86 742.00 1038.55 656.25 218.55 486.45 637.71 244.48 130.96 390.38 466.82 1354.73 684.18 62 E16_Da KnownBoundary 1 491.42 998.18 230.03 921.03 1642.36 1051.84 788.61 472.23 567.15 582.66 375.94 1420.51 2924.00 612.99 276.66 372.47 329.97 116.48 194.45 374.43 129.55 2374.39 611.29 63 ER16b ExonRegion 0 118.72 231.37 41.11 103.33 96.58 69.02 50.68 73.94 63.50 70.35 37.32 115.81 178.04 45.41 54.15 22.06 22.79 7.38 11.45 28.35 10.31 226.73 35.35 64 IG10_AR5 ActiveIntergenicRegion 0 12.71 17.27 6.14 11.88 22.88 5.11 3.93 6.59 5.41 11.92 0.84 3.19 7.78 7.05 4.78 1.76 1.48 3.97 1.86 4.42 0.00 0.00 0.00 65 IG10_SR4 SilentIntergenicRegion 0 17.63 15.05 9.26 21.58 28.94 8.77 10.09 13.40 7.23 16.70 4.71 6.95 21.31 16.61 11.60 7.67 5.89 3.73 6.92 11.69 0.00 0.00 0.07 66 IG10_AR4 ActiveIntergenicRegion 0 21.49 15.31 6.19 15.88 28.34 5.02 16.74 12.43 6.87 16.42 10.89 24.53 45.35 30.38 12.23 12.11 13.05 8.19 8.29 13.61 0.00 0.00 0.00 67 IG10_SR3 SilentIntergenicRegion 0 5.68 7.52 3.11 9.56 14.16 6.27 9.29 7.13 5.13 15.20 7.72 23.08 26.30 22.89 5.99 6.96 9.16 4.68 6.48 14.58 0.00 0.00 0.00 68 IG10_AR3 ActiveIntergenicRegion 0 4.02 5.44 3.60 6.75 7.25 5.66 8.45 6.25 6.13 11.62 6.82 26.89 24.23 21.02 6.81 9.11 8.67 3.26 2.70 11.63 0.23 0.00 0.00 69 IG10_SR2 SilentIntergenicRegion 0 1.48 3.35 1.41 1.27 3.91 8.15 4.57 4.41 6.52 6.45 9.07 7.16 6.85 21.31 3.38 8.92 10.61 9.20 4.29 11.18 0.75 0.00 0.00 70 IG10_AR2 ActiveIntergenicRegion 0 1.76 1.13 1.71 2.92 2.30 5.62 0.97 3.18 3.48 5.08 7.11 6.88 0.66 21.74 3.17 11.44 8.08 7.96 2.81 8.74 0.38 0.00 0.00 71 IG10_SR1 SilentIntergenicRegion 0 1.57 0.78 0.60 0.80 0.00 0.50 0.61 2.39 0.80 1.56 4.46 4.31 0.91 11.53 3.36 1.94 6.31 3.07 1.41 8.61 0.00 0.00 0.00 72 IG10_AR1 ActiveIntergenicRegion 0 1.23 4.25 0.67 1.33 3.41 5.97 3.91 0.60 1.52 4.25 10.88 1.03 0.90 21.19 6.00 10.01 14.99 13.41 5.54 16.89 1.28 0.24 0.68