Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ARF3 Gene 0 187.30 174.50 159.72 132.63 211.55 276.64 144.41 208.29 217.79 229.88 492.48 154.57 168.14 382.53 436.59 409.98 434.77 278.52 237.97 223.79 294.40 288.04 242.20 2 256682 Transcript 0 259.17 232.44 287.40 217.61 277.13 408.24 222.68 353.47 369.14 413.97 983.20 335.79 317.25 769.26 864.77 653.04 921.41 522.12 349.33 428.86 599.76 485.14 320.48 3 447318 Transcript 0 0.00 6.45 2.37 1.70 3.23 5.45 6.01 4.15 1.19 2.50 6.79 0.00 0.00 2.12 18.42 0.00 3.93 12.97 0.00 11.95 0.00 8.08 3.50 4 485410 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 472621 Transcript 0 1.30 3.68 3.90 2.90 4.13 5.27 3.11 3.43 4.75 2.66 4.84 1.31 1.05 3.54 4.95 4.32 9.61 4.57 5.04 5.29 0.85 1.72 1.23 6 ER1a ExonRegion 0 41.90 12.27 8.60 2.62 17.52 82.43 21.91 10.83 6.35 14.34 75.62 10.01 15.61 55.75 82.01 96.32 76.59 20.50 25.43 16.42 69.73 30.21 37.12 7 E1_Ab KnownBoundary 0 75.27 24.60 17.92 4.13 17.23 159.00 32.33 32.00 14.24 39.97 144.98 17.71 25.81 44.62 107.42 230.88 165.97 89.83 58.92 42.38 147.52 54.44 84.77 8 E1_Ac KnownBoundary 1 188.70 76.24 24.25 18.28 82.00 580.35 201.69 13.76 20.43 27.00 339.09 14.55 25.81 127.91 290.87 280.18 295.65 87.92 101.65 115.18 237.16 156.27 195.91 9 ER1b ExonRegion 1 138.02 63.79 42.76 16.64 59.43 400.15 143.68 37.75 35.36 64.53 370.71 11.39 33.08 128.99 317.46 330.38 340.86 172.33 145.86 100.22 275.12 146.39 219.32 10 ER1c ExonRegion 1 215.15 154.28 101.84 65.20 237.61 532.81 218.89 110.28 130.41 219.38 703.35 44.13 78.06 351.11 556.89 532.49 636.76 433.09 438.59 207.78 349.79 297.26 365.88 11 E1a_E4a KnownJunction 1 27.93 23.75 127.17 67.09 55.09 70.41 32.77 134.93 149.10 227.60 821.89 119.89 208.10 295.55 494.96 328.46 752.78 114.54 142.59 193.80 547.97 138.14 198.13 12 E1a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 5.19 14.70 10.61 9.18 12.34 21.07 9.23 13.62 19.01 10.58 17.97 2.50 4.20 10.06 9.62 17.27 24.29 16.84 15.22 14.55 3.41 5.11 4.93 14 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 3.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E2a_E4a NovelJunction 0 6.89 24.34 25.28 15.05 19.02 27.20 20.49 8.91 26.48 11.07 14.85 32.41 0.00 14.83 24.23 11.71 22.25 13.10 3.95 21.67 3.15 5.02 4.35 16 ER3a ExonRegion 0 0.00 0.00 1.89 0.54 0.61 0.00 3.19 0.10 0.00 0.07 1.41 2.76 0.00 1.67 5.71 0.00 5.75 1.43 4.92 6.61 0.00 1.77 0.00 17 E3a_E4a KnownJunction 0 0.00 0.00 3.10 1.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 8.42 0.00 0.00 0.00 0.00 0.00 0.00 18 ER4a ExonRegion 1 53.11 52.47 228.69 141.11 79.41 108.19 69.88 284.48 268.93 396.60 847.35 149.07 127.79 594.50 933.62 499.23 873.11 263.49 413.07 419.08 468.51 420.55 332.11 19 E4_Da KnownBoundary 0 91.42 90.84 329.44 239.03 91.60 190.80 73.49 448.90 402.86 561.74 1037.89 193.41 188.62 1218.50 1466.84 1278.72 986.25 842.37 1186.95 621.91 611.66 1021.25 967.51 20 ER4b ExonRegion 0 116.11 132.39 325.98 219.52 309.75 641.62 264.61 396.09 410.61 504.70 1098.16 305.52 312.15 888.85 1196.45 931.47 963.88 795.25 567.16 580.10 665.61 623.62 534.95 21 E4b_E5a KnownJunction 0 342.21 301.46 390.94 280.28 257.81 424.70 333.83 478.96 467.50 559.99 1317.86 397.33 447.86 1100.01 1214.54 783.64 1214.77 640.25 410.55 608.94 865.38 592.31 402.83 22 E4b_E6a KnownJunction 0 0.00 6.45 2.37 1.70 3.23 5.45 6.01 4.15 1.19 2.50 6.79 0.00 0.00 2.12 18.42 0.00 3.93 12.97 0.00 11.95 0.00 8.08 3.50 23 ER5a ExonRegion 0 419.15 394.00 419.28 317.70 313.45 498.40 263.75 516.20 574.47 643.96 1635.39 485.88 499.97 1184.00 1221.74 1062.90 1505.36 907.69 571.07 703.05 945.57 794.78 507.75 24 E5a_E6a KnownJunction 0 255.16 239.50 453.06 344.28 539.22 749.00 335.55 546.61 574.42 639.91 1487.01 641.31 474.97 1186.60 1466.10 954.19 1459.84 836.28 532.34 619.04 884.65 743.93 429.21 25 ER6a ExonRegion 0 198.39 194.05 418.38 351.94 345.58 437.18 204.26 554.29 596.92 656.39 1544.51 578.00 667.26 1344.55 1470.17 1287.22 1347.85 1094.40 669.56 652.54 958.53 826.69 681.94 26 E6a_E7a KnownJunction 0 95.94 195.16 459.00 376.41 237.78 363.14 211.36 651.06 628.09 699.51 1716.43 532.97 582.75 1731.78 1794.92 1827.13 1543.52 1140.76 926.52 797.37 997.89 1133.86 834.34 27 ER7a ExonRegion 0 206.11 233.60 297.05 245.44 272.17 434.34 221.20 427.84 430.56 538.35 1385.76 386.81 500.31 1026.52 1232.98 981.46 1159.60 799.15 561.45 514.31 877.32 695.13 545.97 28 E7_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER7b ExonRegion 0 69.96 83.51 68.87 70.70 72.12 155.09 92.41 106.09 118.97 167.92 374.50 73.95 84.55 318.72 385.69 243.92 370.95 189.62 177.54 146.38 304.04 223.99 180.44 30 E7_Da KnownBoundary 0 27.93 62.42 52.51 34.83 63.84 42.76 82.98 102.77 106.25 167.24 189.84 72.32 98.86 262.64 270.10 261.98 132.68 144.55 159.63 98.30 146.23 167.23 165.01 31 ER7c ExonRegion 0 50.94 56.13 5.11 4.99 24.51 83.64 48.96 8.90 10.48 10.95 6.63 9.00 19.18 21.91 20.55 32.96 4.03 27.51 16.51 10.25 6.24 13.69 24.20 32 E7_Db KnownBoundary 0 13.85 0.00 0.00 2.86 11.71 2.56 0.00 2.05 2.92 4.70 12.32 5.40 30.19 5.36 6.30 0.00 18.05 7.54 29.18 0.00 5.75 5.76 4.01 33 ER7d ExonRegion 0 237.43 215.00 165.13 143.16 257.65 286.68 158.35 214.72 222.96 211.68 400.13 144.41 147.82 319.93 339.47 368.17 350.49 205.90 207.26 196.83 233.49 264.47 225.49 34 IG49 Intergenic 0 33.13 47.48 65.40 71.40 76.13 32.44 51.15 61.44 62.20 59.79 17.30 17.22 18.05 18.31 27.22 37.88 32.99 98.20 102.67 72.02 33.98 37.73 61.92 35 IG49_AR9 ActiveIntergenicRegion 0 61.66 66.63 78.90 84.53 116.42 34.41 78.64 92.77 90.80 92.47 25.30 44.08 48.26 23.24 38.62 49.03 47.96 125.92 169.93 120.10 46.84 57.87 82.89 36 IG49_SR3 SilentIntergenicRegion 0 35.72 37.56 39.66 55.85 102.76 33.70 67.98 45.19 38.07 54.75 14.44 8.74 13.66 22.88 25.30 60.10 24.03 85.67 86.00 65.53 29.81 40.81 92.17 37 IG49_AR7 ActiveIntergenicRegion 0 6.35 17.29 66.37 52.93 26.76 23.84 23.83 48.97 53.52 69.39 10.95 0.00 0.00 19.49 21.28 13.37 16.50 108.71 57.34 51.42 42.61 37.85 63.63 38 IG49_AR6 ActiveIntergenicRegion 0 3.93 13.65 58.29 44.98 40.52 16.50 20.99 45.43 53.46 66.36 16.84 8.66 4.69 20.42 13.26 11.46 24.99 88.96 49.15 47.11 53.52 31.85 41.95 39 IG49_AR5 ActiveIntergenicRegion 0 10.40 18.30 54.45 41.42 45.95 21.61 30.22 45.17 50.91 59.59 22.86 10.54 4.69 26.83 12.36 18.87 30.86 77.28 59.28 42.37 57.87 22.83 39.33 40 IG49_SR2 SilentIntergenicRegion 0 10.58 22.08 47.79 37.58 52.37 24.36 34.04 35.31 46.23 52.92 22.92 12.99 2.68 26.22 11.19 22.08 26.41 63.09 59.16 45.59 56.98 18.16 42.37 41 IG49_AR4 ActiveIntergenicRegion 0 15.74 22.24 43.88 40.72 63.88 22.01 38.23 35.97 47.17 48.03 17.15 6.49 0.00 24.36 9.43 25.82 23.73 48.04 61.32 49.60 38.01 18.62 38.73 42 IG49_AR3 ActiveIntergenicRegion 0 6.98 16.07 38.84 44.98 48.97 20.54 24.36 35.43 40.64 45.99 10.24 4.33 0.00 15.92 11.90 23.78 14.85 47.86 55.11 57.87 23.58 25.42 33.48 43 IG49_AR2 ActiveIntergenicRegion 0 23.88 30.97 52.15 60.98 59.17 30.68 45.44 51.00 59.55 54.57 14.48 7.05 5.43 16.55 27.86 40.34 29.65 94.56 89.47 70.25 35.22 29.44 65.13 44 IG49_SR1 SilentIntergenicRegion 0 17.17 44.54 68.40 73.81 53.53 30.61 39.90 45.96 54.31 43.58 14.92 7.58 9.42 14.53 22.76 29.48 28.70 90.53 76.53 54.06 26.21 28.84 48.13 45 IG49_AR1 ActiveIntergenicRegion 0 47.83 60.88 66.84 70.79 96.87 39.84 43.51 76.53 46.98 57.20 15.35 18.50 14.90 20.79 21.72 35.05 28.60 85.70 93.09 45.35 28.44 43.18 52.71