Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FGFR1OP2 Gene 0 118.71 82.02 51.58 102.58 168.16 130.77 118.57 75.44 83.93 80.40 163.64 321.03 242.01 203.69 133.41 136.92 137.10 41.05 31.00 52.76 56.94 143.68 81.32 2 327214 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 229395 Transcript 1 37.81 28.07 28.47 19.95 46.43 17.05 29.34 26.47 18.58 15.04 76.07 155.52 51.84 101.20 75.76 62.98 74.36 25.32 20.85 23.27 67.74 126.14 69.27 4 395941 Transcript 0 0.00 0.00 39.38 64.23 0.00 0.00 0.00 42.10 70.63 53.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.18 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 45.39 10.06 11.41 11.14 15.15 30.94 23.87 14.73 20.44 19.08 71.41 24.55 38.15 97.08 60.09 86.11 80.59 30.36 9.14 22.20 50.07 32.15 51.73 6 E1a_E2a KnownJunction 1 183.44 47.49 51.18 57.60 58.66 63.94 45.05 52.82 114.61 83.25 225.53 131.89 148.85 399.79 266.89 398.78 179.71 156.61 58.54 75.93 120.84 192.82 285.11 7 ER2a ExonRegion 0 78.92 67.46 54.18 62.67 155.07 143.21 135.04 59.75 91.09 69.75 270.61 174.54 246.87 280.41 176.45 239.01 250.89 119.63 48.06 72.35 160.12 124.45 163.07 8 E2a_E3a KnownJunction 1 66.68 81.24 57.42 87.37 112.48 167.74 139.86 106.30 134.78 105.41 339.24 232.13 649.80 372.83 207.68 228.15 258.25 95.47 66.26 78.62 139.99 148.80 140.08 9 E3_Ab NovelBoundary 0 62.60 53.08 23.06 38.89 46.01 81.37 104.44 54.01 63.28 40.80 211.63 131.14 306.96 139.38 55.50 166.28 180.55 42.70 47.91 86.48 114.78 108.20 125.31 10 ER3a ExonRegion 1 94.64 83.38 50.77 80.02 101.68 170.02 163.60 109.63 117.16 86.18 421.10 338.32 708.86 377.26 215.94 319.29 325.85 86.05 75.99 111.25 203.37 177.99 211.86 11 ER3b ExonRegion 0 125.71 65.79 70.89 106.75 117.56 112.69 107.67 102.65 139.57 97.97 399.24 512.52 599.82 526.45 314.30 330.74 395.69 104.82 76.99 120.76 171.61 233.22 244.11 12 E3a_E4a KnownJunction 0 158.55 55.85 83.76 126.06 179.03 88.30 148.25 107.49 122.60 107.26 356.35 574.39 553.05 455.47 249.83 310.69 321.74 82.41 116.05 102.08 107.86 298.45 238.33 13 ER4a ExonRegion 0 185.38 90.57 65.37 94.31 201.95 157.18 170.48 99.90 108.64 94.14 313.03 602.37 706.06 445.99 271.07 299.29 293.34 101.24 87.59 93.48 102.57 229.78 173.28 14 E4_Da NovelBoundary 0 13.93 20.46 4.94 9.89 11.54 60.65 47.96 8.21 16.23 12.03 33.06 66.92 46.75 25.96 15.08 19.05 12.25 8.17 3.58 23.71 8.28 50.52 11.27 15 E4a_E5a KnownJunction 0 56.82 21.84 36.04 13.72 62.65 8.69 34.18 34.71 19.24 15.58 95.66 155.75 67.20 116.02 89.99 78.95 77.05 30.84 16.38 27.16 48.99 115.55 86.90 16 E4a_E6a KnownJunction 0 34.01 33.42 14.37 37.19 42.44 94.43 65.89 41.24 48.78 56.44 152.99 323.36 301.44 167.23 69.72 164.57 185.79 34.12 22.78 44.36 14.70 28.17 7.51 17 I4 Intron 0 9.03 9.51 2.65 21.20 25.67 18.11 23.25 9.71 16.02 10.10 16.37 53.25 50.42 34.93 5.31 12.87 10.79 4.83 3.24 14.51 5.49 25.90 12.21 18 I4_AR1 ActiveIntronRegion 0 8.38 8.25 0.98 9.89 15.82 19.22 27.52 6.08 13.33 9.26 13.00 40.05 35.90 37.88 5.42 18.24 7.82 6.50 3.06 13.46 6.11 23.44 17.98 19 I4_SR2 SilentIntronRegion 0 8.03 7.21 0.89 22.48 17.22 19.34 21.78 13.52 15.87 6.56 18.69 42.41 56.89 31.17 3.62 9.80 14.95 3.36 2.28 18.17 3.16 28.48 10.99 20 I4_AR2 ActiveIntronRegion 0 9.95 10.97 3.77 25.03 31.80 18.33 23.61 10.10 17.81 12.06 17.21 60.75 53.42 36.03 5.87 13.22 10.64 5.11 3.80 14.40 6.20 26.54 11.55 21 E5_Aa NovelBoundary 0 12.89 15.59 3.10 32.36 67.66 26.23 56.13 21.56 23.15 4.94 40.38 69.32 47.07 60.10 8.90 51.70 20.01 3.23 12.52 18.98 29.04 28.53 16.30 22 ER5a ExonRegion 0 50.52 38.94 26.58 37.52 60.42 28.62 36.84 26.72 23.52 23.32 106.60 200.22 74.83 158.57 107.98 89.29 78.99 32.64 37.61 36.56 83.82 159.70 95.13 23 E5_Da NovelBoundary 0 21.11 18.48 29.92 33.80 51.36 25.78 23.10 15.90 26.91 18.21 52.49 141.65 147.88 79.82 110.76 36.57 53.11 4.27 9.41 34.64 42.38 41.03 40.29 24 E5a_E6a KnownJunction 1 6.08 23.42 22.80 8.62 16.21 13.86 17.00 17.99 12.99 6.21 25.95 110.59 13.47 29.02 29.30 20.68 67.04 12.48 8.56 6.07 70.43 103.18 25.78 25 I5 Intron 0 37.36 20.81 8.63 30.08 54.04 33.53 35.00 17.75 20.27 16.46 21.87 61.24 44.48 44.11 15.56 24.59 15.36 7.18 8.73 17.50 9.31 39.24 18.61 26 I5_AR1 ActiveIntronRegion 0 20.80 13.95 7.11 25.49 38.54 22.67 28.65 17.04 17.98 15.64 21.99 74.06 46.29 47.34 14.42 26.27 15.50 5.64 9.45 15.78 8.04 40.05 19.24 27 I5_AR2 ActiveIntronRegion 0 36.55 26.43 7.69 31.64 60.54 41.75 37.96 16.76 21.58 16.44 22.56 52.64 42.10 41.87 16.21 22.85 14.79 8.32 7.62 19.55 10.30 38.21 17.72 28 I5_AR3 ActiveIntronRegion 1 71.96 13.14 14.61 33.44 65.66 19.18 42.26 21.94 18.34 21.09 20.37 54.28 47.26 51.35 0.00 40.92 10.16 7.11 11.52 26.84 13.22 73.56 18.30 29 I5_SR2 SilentIntronRegion 0 99.19 24.80 17.95 42.55 87.35 43.15 46.94 25.59 25.18 20.64 20.19 56.50 50.79 42.43 18.11 25.91 18.98 8.62 11.49 16.25 10.69 41.88 21.16 30 E6_Aa NovelBoundary 0 101.28 31.18 36.55 56.30 121.65 54.06 96.10 35.28 38.05 17.49 35.90 43.66 59.09 73.46 25.59 20.17 33.38 22.84 4.42 8.50 27.43 30.62 60.10 31 ER6a ExonRegion 0 67.56 60.13 44.09 65.07 131.58 145.34 125.39 67.48 84.11 72.23 204.32 441.44 319.29 231.13 106.72 180.48 240.97 47.03 42.53 56.70 74.84 129.75 82.11 32 E6_Da KnownBoundary 0 29.04 43.61 30.07 28.70 81.75 83.99 84.92 43.25 48.64 39.33 83.71 151.40 108.27 61.10 20.40 96.38 69.28 23.30 26.07 29.66 18.16 68.58 31.24 33 E6a_E6b KnownJunction 0 0.00 0.00 39.38 64.23 0.00 0.00 0.00 42.10 70.63 53.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.18 0.00 0.00 0.00 0.00 0.00 34 E6_Ab KnownBoundary 0 58.23 44.66 16.91 60.86 155.86 70.87 41.69 47.40 43.87 51.33 66.02 168.20 101.94 101.36 39.93 77.24 100.33 29.76 34.35 25.31 36.88 60.93 39.69 35 ER6b ExonRegion 0 98.21 79.31 47.54 97.58 220.48 179.71 118.89 78.13 97.57 84.41 193.29 504.82 321.74 279.02 124.17 202.70 211.26 52.11 47.78 69.79 83.30 149.18 88.10 36 ER6c ExonRegion 0 108.75 68.12 45.30 119.25 223.33 162.51 119.86 81.57 101.36 82.06 204.59 595.75 398.41 304.27 116.35 217.94 183.14 61.20 39.87 78.28 101.18 126.23 96.96 37 E6b_E7a KnownJunction 0 112.98 78.54 60.35 143.57 320.97 209.99 227.31 92.17 125.52 83.03 245.69 710.18 467.83 324.98 141.29 269.25 229.83 75.65 52.24 88.08 105.33 130.06 121.47 38 ER7a ExonRegion 0 96.69 70.53 49.66 130.19 229.55 153.07 175.46 81.51 121.76 83.30 260.13 616.15 508.74 301.40 104.60 240.74 205.35 74.10 45.77 70.66 94.06 162.62 106.65 39 ER7b ExonRegion 0 142.62 107.52 60.99 136.69 216.18 159.20 141.39 91.45 95.30 99.10 136.98 353.57 209.47 163.63 120.54 100.01 96.03 21.65 22.53 47.47 25.82 156.25 52.58 40 IG6 Intergenic 0 20.24 12.52 14.56 30.38 39.84 30.42 19.23 18.92 21.13 20.67 9.98 40.84 30.84 20.95 23.50 11.85 6.08 5.86 5.63 9.41 1.31 25.46 4.29 41 IG6_AR1 ActiveIntergenicRegion 0 75.99 38.31 47.33 107.15 139.83 81.63 64.64 67.39 51.95 66.59 38.76 153.14 98.17 71.60 86.67 41.51 18.59 5.05 12.65 24.67 3.14 98.29 15.44 42 IG6_AR2 ActiveIntergenicRegion 0 2.82 3.98 6.21 8.29 12.77 22.41 7.31 3.31 17.62 15.61 1.47 9.53 24.94 9.60 5.06 2.56 2.51 6.05 3.90 4.67 0.07 3.41 1.02