Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TSPAN11 Gene 0 19.60 28.16 75.04 60.74 30.30 71.29 40.18 18.04 61.35 53.08 0.02 0.96 0.04 0.16 0.21 0.00 0.24 55.44 29.68 38.16 130.14 406.04 293.61 2 261177 Transcript 0 6.87 15.21 35.50 25.21 9.45 34.92 20.56 9.29 45.67 30.36 0.00 0.16 0.00 0.25 0.50 0.00 0.02 40.60 18.71 31.94 105.26 269.26 205.25 3 IG35_AR3 ActiveIntergenicRegion 0 0.00 0.00 3.55 0.95 0.00 1.72 1.43 0.00 4.82 0.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.41 9.83 3.56 14.58 4 IG35_AR5 ActiveIntergenicRegion 0 0.46 0.00 5.08 0.15 0.39 0.13 0.19 0.94 2.02 1.12 0.00 0.26 0.28 0.00 0.00 0.00 0.00 0.20 1.40 6.38 4.35 13.24 6.30 5 IG35_AR6 ActiveIntergenicRegion 0 0.63 0.00 18.32 0.60 0.40 0.00 0.20 0.97 11.29 0.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.83 6.34 1.95 5.82 6.17 6 IG35_AR10 ActiveIntergenicRegion 0 1.75 3.36 6.14 1.96 3.32 9.22 5.10 0.71 4.43 8.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.59 4.39 7.59 14.57 15.21 38.12 7 ER1a ExonRegion 0 0.00 5.14 0.02 4.25 0.03 0.04 0.65 0.00 0.63 0.03 0.00 0.00 0.00 0.67 0.00 0.00 0.00 1.45 0.06 1.36 1.45 2.04 3.51 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER2a ExonRegion 0 2.85 16.87 32.05 16.07 16.31 39.59 20.43 4.20 17.15 23.83 0.00 0.00 0.00 0.22 0.43 0.00 0.00 31.37 34.67 27.03 61.75 104.26 96.04 10 E2_Da NovelBoundary 0 0.00 12.17 28.95 8.19 4.07 7.44 21.07 6.90 8.42 14.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.90 9.41 2.36 5.13 8.94 3.93 11 E2a_E3a KnownJunction 0 6.52 24.01 39.65 33.13 4.33 19.82 28.53 10.84 34.69 42.36 0.00 0.00 0.00 2.47 4.45 0.00 0.00 49.41 31.91 42.50 107.06 130.30 95.78 12 ER3a ExonRegion 0 2.47 13.87 44.53 23.93 7.72 23.44 16.43 8.57 41.00 31.62 0.00 0.00 0.00 0.25 0.33 0.00 0.00 55.91 23.06 36.69 100.45 282.41 229.88 13 E3_Da NovelBoundary 0 0.00 12.10 28.03 14.08 8.66 7.10 6.27 2.55 10.24 21.41 0.00 0.00 0.00 0.00 4.45 0.00 0.00 42.70 12.99 23.07 8.40 11.51 11.35 14 E3a_E4a KnownJunction 0 2.89 15.46 40.63 26.57 6.45 31.69 16.16 2.30 44.44 32.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62.43 50.45 35.35 102.67 321.11 196.85 15 I3 Intron 0 2.69 6.94 10.25 9.21 4.41 7.60 15.83 4.00 5.47 13.23 0.07 0.14 0.07 0.02 0.04 0.00 0.01 19.97 10.00 19.06 5.65 15.44 24.42 16 I3_SR1 SilentIntronRegion 0 1.90 5.13 9.15 7.29 2.44 5.12 12.01 1.91 2.90 10.27 0.15 0.12 0.15 0.17 0.00 0.00 0.13 16.26 8.82 15.75 3.87 8.61 17.15 17 I3_AR1 ActiveIntronRegion 0 0.95 7.34 8.06 7.01 2.61 5.13 13.39 3.05 4.12 9.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.18 8.76 21.36 6.97 13.34 18.93 18 I3_SR2 SilentIntronRegion 0 1.39 9.68 5.38 11.30 0.09 10.30 18.33 4.40 5.41 11.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.18 14.12 32.24 9.19 15.87 28.43 19 I3_AR2 ActiveIntronRegion 0 0.60 7.13 9.36 11.79 5.28 9.95 14.04 1.62 3.36 12.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.86 11.86 26.94 3.63 15.72 25.29 20 I3_AR3 ActiveIntronRegion 0 1.60 12.13 9.81 7.11 2.78 8.26 25.18 6.27 6.38 15.50 0.49 0.00 0.00 0.00 0.26 0.00 0.00 23.60 8.90 18.67 5.54 13.62 24.30 21 I3_SR4 SilentIntronRegion 0 3.63 15.13 8.74 7.14 5.96 8.59 22.35 6.29 7.26 13.36 0.15 0.71 0.00 0.00 0.08 0.00 0.00 17.92 13.04 19.90 4.69 11.88 26.87 22 I3_AR4 ActiveIntronRegion 0 1.44 10.21 14.73 15.99 7.66 5.53 21.54 8.31 6.67 18.98 0.00 0.00 0.00 0.00 0.45 0.00 0.00 22.28 16.50 27.81 7.29 23.26 34.34 23 I3_SR5 SilentIntronRegion 0 3.00 5.23 10.75 9.70 4.57 8.04 14.65 3.71 5.64 13.59 0.03 0.08 0.08 0.00 0.00 0.00 0.00 20.98 9.31 18.42 5.96 17.12 25.02 24 E4_Aa NovelBoundary 0 13.11 0.00 33.00 19.38 11.21 35.49 26.59 6.00 13.51 27.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.19 3.67 15.15 3.09 28.66 34.91 25 ER4a ExonRegion 0 10.67 11.06 44.34 24.39 17.98 64.16 30.06 12.10 57.38 45.57 0.00 0.00 0.00 0.00 1.39 0.00 0.00 58.36 16.56 46.04 138.25 292.22 206.11 26 E4a_E5a KnownJunction 0 6.96 17.83 51.71 31.96 11.97 34.81 41.51 18.32 69.82 52.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45.39 16.75 54.90 144.62 329.01 282.64 27 ER5a ExonRegion 0 5.97 10.36 49.48 26.78 3.29 41.37 28.69 21.94 53.87 43.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62.68 18.78 47.80 113.61 319.27 220.42 28 E5_Da NovelBoundary 0 3.33 6.12 4.11 4.99 0.00 5.39 9.63 0.00 2.31 13.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.86 0.00 3.00 0.00 2.39 3.50 29 E5a_E6a KnownJunction 0 18.45 29.60 52.01 38.46 8.06 28.39 20.45 3.98 53.67 28.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.87 25.51 33.94 132.14 384.55 256.60 30 ER6a ExonRegion 0 7.16 12.94 29.66 23.32 5.54 38.71 21.71 13.49 51.80 29.65 0.00 1.39 0.00 0.00 0.66 0.00 0.00 37.14 16.77 32.66 106.93 311.31 213.23 31 E6_Da NovelBoundary 0 0.00 0.00 2.78 5.69 11.46 11.13 4.15 0.00 1.65 5.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.69 3.26 0.00 2.57 4.35 32 E6a_E7a KnownJunction 0 12.82 23.94 27.94 28.97 8.66 68.88 13.65 7.52 63.11 26.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68.73 9.51 44.61 134.06 335.74 364.42 33 ER7a ExonRegion 0 4.14 16.22 25.59 22.40 5.75 42.79 15.43 11.92 63.73 27.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37.44 4.87 37.12 150.51 387.89 278.27 34 E7a_E8a KnownJunction 0 0.00 0.00 12.71 10.29 11.38 12.32 10.82 4.85 67.10 13.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 149.32 405.73 322.67 35 I7 Intron 0 2.50 7.72 10.41 10.83 6.73 12.15 12.69 5.42 4.49 14.78 0.15 0.04 0.00 0.10 0.07 0.10 0.04 23.90 11.33 25.30 2.51 7.81 13.72 36 I7_SR1 SilentIntronRegion 0 2.06 9.15 10.26 9.65 4.93 9.23 10.51 5.55 4.12 14.01 0.13 0.00 0.00 0.19 0.07 0.00 0.00 24.03 12.94 25.00 2.14 6.63 11.77 37 I7_AR1 ActiveIntronRegion 0 4.24 10.31 11.23 13.84 13.66 11.36 22.84 5.82 4.66 17.43 0.68 0.42 0.00 0.00 0.00 0.00 0.00 21.55 11.75 32.54 3.09 6.32 13.42 38 I7_SR2 SilentIntronRegion 0 2.46 6.57 10.37 10.99 6.60 13.79 12.26 5.29 4.66 14.79 0.07 0.00 0.00 0.07 0.07 0.16 0.06 24.20 10.43 24.36 2.61 8.67 14.79 39 E8_Aa NovelBoundary 0 3.78 32.69 22.62 9.72 11.97 16.07 11.84 5.96 2.84 34.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.40 7.72 15.72 0.00 12.06 16.22 40 ER8a ExonRegion 0 22.19 30.85 82.22 67.62 34.22 77.78 43.88 19.37 64.86 57.27 0.02 1.08 0.04 0.16 0.18 0.00 0.28 57.79 31.82 39.10 136.12 432.98 312.35