Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SENP1 Gene 0 44.73 81.31 38.16 61.74 87.20 72.62 74.50 59.11 46.00 81.80 152.07 183.13 150.10 169.75 73.43 126.06 181.63 76.25 55.82 78.55 35.43 65.40 41.68 2 448372 Transcript 0 0.00 5.31 0.00 0.63 1.44 2.21 0.77 1.59 2.18 5.76 19.77 10.45 8.60 20.94 5.18 10.00 20.79 5.30 4.86 5.88 3.95 3.80 4.69 3 4980 Transcript 0 2.62 3.41 12.12 15.14 10.30 13.46 9.82 19.63 15.67 20.37 24.96 19.14 19.32 34.99 16.32 23.84 39.46 35.11 26.70 36.88 10.19 15.02 17.64 4 339976 Transcript 0 3.99 12.01 4.30 12.36 10.32 11.83 13.16 14.35 12.79 21.11 15.14 33.78 20.57 20.97 5.48 16.66 18.72 11.19 10.03 10.31 4.92 11.32 8.41 5 IG22_AR1 ActiveIntergenicRegion 0 1.48 1.65 0.61 0.24 0.93 2.77 4.46 1.75 1.89 4.12 8.09 2.05 1.44 14.45 5.08 10.18 11.56 9.23 4.44 5.27 7.03 3.39 3.67 6 ER1a ExonRegion 0 0.00 1.06 0.00 0.00 0.00 6.62 2.30 0.68 2.04 4.09 3.61 0.00 0.00 3.60 4.79 10.08 8.32 0.64 0.00 2.68 5.75 0.00 9.70 7 ER1b ExonRegion 0 2.28 9.80 11.60 8.76 10.15 15.75 11.31 17.73 15.43 22.78 64.86 19.23 21.32 68.29 18.98 56.13 97.63 51.72 22.65 44.60 24.69 24.03 19.22 8 E1_Da KnownBoundary 0 0.00 5.79 12.24 9.22 3.48 20.90 16.91 35.90 20.95 28.34 30.38 6.30 18.99 14.24 5.69 23.16 51.15 44.36 28.24 38.41 10.63 8.57 24.16 9 E1a_E1c NovelJunction 0 0.00 0.00 22.44 26.10 4.07 0.00 10.51 22.14 19.42 35.75 7.58 0.00 0.00 2.83 0.00 20.51 26.65 33.41 13.55 36.69 8.90 17.57 20.49 10 E1a_E2a KnownJunction 0 0.00 14.87 0.00 1.90 4.33 0.00 0.00 4.11 4.48 13.19 55.70 31.36 25.81 59.22 10.75 19.91 54.04 15.25 9.60 14.96 6.12 11.39 4.35 11 E1_Ac KnownBoundary 0 0.00 3.35 0.00 17.15 0.00 2.90 6.09 6.82 5.56 11.95 6.84 0.00 0.00 7.71 0.00 10.77 22.07 12.93 12.33 11.12 0.00 17.64 0.00 12 ER1c ExonRegion 0 0.00 4.07 23.28 22.83 8.03 14.67 14.56 38.03 26.86 36.99 44.46 17.32 32.83 62.93 25.39 47.55 72.62 69.75 46.98 63.83 20.38 25.52 29.37 13 ER1d ExonRegion 0 0.04 2.51 15.21 17.37 6.45 9.96 13.08 18.71 21.17 24.94 31.27 48.13 25.01 65.98 22.87 32.34 42.01 44.16 22.42 44.76 24.46 18.59 14.22 14 E1_Db NovelBoundary 0 42.75 15.00 8.57 4.89 16.30 7.89 18.20 9.00 15.05 8.84 7.63 12.15 0.00 32.55 24.35 23.24 25.43 10.94 4.52 28.76 2.78 10.78 11.10 15 E1b_E2a KnownJunction 0 0.00 5.59 9.31 3.63 7.89 8.40 6.71 13.68 19.24 10.15 27.80 66.47 33.11 55.27 8.90 26.40 43.48 23.59 12.42 40.20 28.85 22.47 7.34 16 E1b_E3a NovelJunction 0 0.00 2.83 3.19 0.00 0.00 0.00 0.00 4.39 2.78 7.68 12.74 0.00 8.28 4.94 0.00 0.00 13.00 8.25 0.00 3.20 0.00 16.35 0.00 17 I1_AR1 ActiveIntronRegion 0 4.90 4.26 4.36 13.13 10.01 4.87 15.60 13.79 10.37 5.24 8.39 14.39 11.56 14.21 17.44 12.14 14.40 4.88 7.91 17.33 2.57 7.24 7.82 18 I1_SR1 SilentIntronRegion 0 9.23 10.11 7.69 16.05 8.58 6.45 19.33 14.32 9.49 8.07 8.68 19.77 34.70 8.51 8.77 9.92 13.83 3.23 10.29 17.02 0.63 5.20 6.35 19 I1_AR2 ActiveIntronRegion 0 10.21 3.71 11.24 22.14 20.53 7.98 18.27 18.39 11.68 9.89 18.61 41.04 26.60 14.48 4.92 17.78 25.66 8.03 7.28 18.20 3.24 5.43 6.27 20 I1_AR3 ActiveIntronRegion 0 7.48 3.20 3.86 19.65 7.87 7.05 11.93 12.48 9.87 8.19 13.75 38.25 33.32 18.49 9.26 13.60 26.50 16.45 6.79 20.94 5.24 2.54 6.37 21 ER2a ExonRegion 1 24.69 30.76 8.42 15.73 39.63 37.94 42.34 23.69 29.85 37.78 129.71 97.95 110.90 167.79 24.42 117.21 147.85 62.48 33.65 71.85 43.62 52.91 19.88 22 E2a_E3a KnownJunction 0 55.05 32.23 13.66 23.91 50.59 71.32 65.01 33.56 35.45 57.35 187.15 72.62 137.65 169.46 34.24 151.41 166.34 78.39 43.86 81.24 45.47 67.97 22.62 23 ER3a ExonRegion 0 25.74 44.41 23.92 33.05 48.57 56.18 49.38 45.47 45.97 75.97 189.79 160.29 116.03 185.03 45.64 142.44 222.14 105.05 59.14 90.64 68.33 75.96 42.08 24 E3a_E4a KnownJunction 0 21.34 45.26 37.43 89.87 60.78 45.66 47.74 78.12 65.22 128.59 275.44 272.19 143.82 334.16 99.51 264.29 276.58 175.56 99.30 134.23 82.84 105.26 54.97 25 ER4a ExonRegion 0 18.60 42.51 29.24 51.92 63.12 63.41 57.96 67.29 68.22 126.97 248.57 195.84 199.57 301.23 62.74 240.81 329.24 159.54 83.12 144.63 85.12 108.44 62.91 26 E4_Da NovelBoundary 0 0.00 2.89 5.14 10.69 36.76 5.79 21.90 2.30 2.95 9.05 0.00 6.30 6.82 0.00 0.00 3.93 3.55 0.00 4.52 2.94 0.00 0.00 0.00 27 E4a_E5a KnownJunction 1 6.30 2.70 4.52 8.36 12.73 11.02 10.02 10.10 13.40 12.33 6.79 70.37 6.82 21.60 0.00 20.34 13.93 6.80 9.41 11.63 3.15 11.02 8.11 28 E4a_E6a KnownJunction 0 24.82 30.19 28.38 35.96 83.62 98.69 87.75 42.63 53.15 84.53 220.06 175.86 186.51 222.50 64.65 179.01 325.01 105.91 49.60 155.89 77.35 112.30 46.95 29 ER5a ExonRegion 0 2.78 11.77 5.53 12.49 9.82 13.17 18.91 18.74 11.63 22.75 17.99 30.97 34.44 17.30 6.69 16.93 28.40 12.38 12.11 16.03 6.36 14.01 13.63 30 E5a_E6a KnownJunction 0 2.89 21.58 2.84 16.22 8.40 11.30 10.55 14.21 13.34 28.26 20.64 0.00 20.45 24.02 9.77 12.73 13.84 14.38 8.56 3.26 5.25 8.94 3.50 31 ER6a ExonRegion 0 31.68 68.07 42.75 56.88 119.97 110.33 102.34 70.85 77.11 118.56 224.28 268.24 225.94 273.20 56.85 199.28 347.21 139.19 66.83 110.44 66.44 97.00 70.04 32 E6a_E7a KnownJunction 1 18.45 54.53 35.10 62.93 91.43 88.47 96.72 82.11 75.75 83.97 256.85 244.73 413.12 314.56 41.16 240.88 274.24 166.23 90.26 96.32 81.67 106.18 68.46 33 ER7a ExonRegion 0 35.54 63.96 31.59 48.97 78.64 75.62 89.14 67.92 75.93 107.19 274.12 332.87 313.55 342.97 71.40 257.61 361.45 142.01 93.97 105.81 64.14 115.83 83.47 34 E7a_E8a KnownJunction 1 13.85 54.27 25.40 29.83 84.30 69.05 98.88 46.04 58.30 86.82 176.15 247.28 304.36 202.37 29.42 167.82 296.49 67.32 44.99 74.78 36.14 111.08 61.03 35 ER8a ExonRegion 0 31.77 62.94 35.57 51.62 89.33 106.85 103.10 74.66 91.47 127.50 314.43 345.19 342.91 324.90 83.27 250.29 386.05 90.72 124.75 135.52 45.26 151.46 89.60 36 E8a_E9a KnownJunction 0 33.34 42.16 31.46 49.04 81.32 83.30 109.17 66.21 73.35 111.56 252.80 388.78 315.40 285.13 67.50 169.53 362.51 86.51 74.83 106.29 39.17 103.12 94.07 37 ER9a ExonRegion 0 24.99 67.06 37.85 68.04 94.66 99.59 107.34 72.24 68.03 127.22 296.42 370.61 308.01 261.55 67.48 190.22 315.93 99.17 83.35 133.79 45.89 104.50 73.88 38 E9a_E10a KnownJunction 0 17.56 70.25 17.50 59.90 100.93 102.16 130.63 54.26 69.50 89.50 226.22 436.79 316.21 237.92 51.55 195.50 320.99 115.32 54.87 123.30 63.69 64.05 83.06 39 ER10a ExonRegion 0 26.94 72.91 17.96 45.99 67.53 63.98 108.11 47.80 58.61 77.89 216.27 338.01 286.60 208.60 61.08 169.25 261.67 105.25 75.64 96.25 52.77 58.91 56.06 40 E10a_E11a KnownJunction 0 24.67 74.07 16.08 28.20 49.58 69.39 103.61 43.09 38.63 60.22 167.41 262.44 208.59 221.09 63.91 126.55 192.80 58.95 66.92 111.02 34.47 58.91 70.85 41 E10a_E12a NovelJunction 0 3.11 20.26 1.83 4.73 4.33 0.00 13.16 2.51 2.98 12.76 12.37 5.55 13.64 21.37 12.49 16.32 4.77 1.58 13.55 2.56 2.59 5.51 3.33 42 ER11a ExonRegion 1 22.58 108.30 26.77 54.66 79.31 69.36 86.02 51.85 50.29 86.28 192.25 287.97 199.99 246.37 49.40 172.23 226.24 80.40 69.75 94.22 50.63 59.67 58.66 43 E11a_E12a KnownJunction 1 36.08 185.62 31.70 60.86 126.74 90.63 86.91 50.32 48.44 90.93 224.69 338.96 231.97 257.93 50.19 228.15 287.89 69.68 92.80 91.21 74.94 75.68 69.31 44 ER12a ExonRegion 0 38.67 134.55 32.58 42.89 106.72 79.31 85.76 42.76 53.66 80.26 177.55 257.12 234.23 254.45 61.13 190.81 232.65 73.67 60.78 103.38 59.91 65.28 58.77 45 E12a_E13a KnownJunction 0 60.46 128.00 26.85 48.35 88.88 57.81 95.21 52.49 52.72 77.90 137.56 202.42 112.17 148.39 49.32 100.23 178.68 72.13 25.13 92.04 36.51 50.40 46.10 46 ER13a ExonRegion 0 39.63 102.76 33.85 62.23 108.26 98.21 117.75 62.53 59.46 93.13 172.49 336.45 217.58 189.21 68.37 149.24 183.45 63.00 48.41 110.62 30.60 90.09 55.65 47 E13a_E14a KnownJunction 1 103.57 147.34 38.08 93.19 175.21 128.39 163.67 103.18 50.64 96.00 149.62 407.08 235.86 185.53 112.12 111.34 114.73 48.96 38.87 118.18 22.43 109.18 44.39 48 ER14a ExonRegion 0 37.39 127.28 29.49 65.19 107.25 87.68 123.29 67.11 51.08 83.60 205.30 364.89 205.33 168.91 85.70 109.41 233.44 57.14 37.74 87.54 21.40 82.76 47.05 49 E14a_E15a KnownJunction 0 63.49 100.71 24.04 68.56 105.09 120.39 113.54 75.78 53.79 108.33 230.95 368.22 209.08 203.01 70.71 97.75 222.63 48.25 43.48 77.66 14.76 85.73 37.39 50 I14_AR1 ActiveIntronRegion 0 6.46 5.82 7.47 9.08 9.09 6.01 17.91 11.01 8.01 4.37 10.64 27.60 23.08 12.70 5.47 8.42 14.91 6.47 5.08 7.54 2.07 6.33 2.83 51 I14_SR2 SilentIntronRegion 0 6.09 5.00 11.84 9.68 11.87 6.74 17.80 11.55 7.06 5.46 11.46 20.86 16.23 9.43 7.91 17.86 13.23 4.88 6.92 8.33 3.27 8.37 5.47 52 ER15a ExonRegion 0 41.40 84.31 38.36 80.47 80.14 97.87 101.56 67.62 65.19 105.00 241.89 351.73 216.57 232.79 86.74 136.03 270.80 58.10 54.43 87.90 30.48 71.71 47.17 53 E15a_E16a KnownJunction 0 36.75 63.48 34.53 84.24 98.81 119.02 139.69 61.45 71.64 107.61 215.74 241.28 126.94 234.45 93.08 122.45 221.69 77.02 55.44 90.57 40.90 80.83 47.72 54 ER16a ExonRegion 0 26.75 60.52 43.87 85.23 77.93 132.35 111.68 78.17 58.65 112.34 246.30 276.11 193.11 273.68 106.66 193.34 269.11 100.15 83.34 96.60 38.84 96.68 50.44 55 E16a_E17a KnownJunction 0 36.15 88.08 61.71 87.97 101.87 109.20 109.70 95.09 67.04 128.48 200.05 356.07 239.76 363.24 140.06 245.49 233.19 143.59 160.48 117.61 54.06 70.97 73.16 56 ER17a ExonRegion 0 32.35 63.30 60.04 83.50 81.63 99.89 102.96 86.93 66.97 119.06 229.74 330.06 176.18 294.58 107.62 235.64 304.07 179.10 102.61 112.54 71.56 75.52 73.28 57 E17a_E18a KnownJunction 1 41.34 38.02 56.24 94.86 82.34 126.75 126.04 73.56 57.15 122.41 238.74 369.27 124.99 272.41 99.76 166.37 284.43 198.60 110.50 132.05 80.62 81.69 79.13 58 E17a_E18b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.99 0.00 0.00 0.00 0.00 59 E18_Ab NovelBoundary 0 19.78 20.65 15.73 32.86 15.96 25.44 43.37 24.89 17.53 51.74 87.02 55.52 24.19 39.20 23.49 51.61 88.92 53.52 31.25 26.65 35.09 28.04 22.45 60 ER18a ExonRegion 1 41.80 41.18 55.14 90.97 88.30 114.61 106.91 73.03 61.45 119.28 251.28 334.45 128.98 253.36 86.31 178.33 275.62 201.87 83.62 115.43 76.58 84.90 74.15 61 ER18b ExonRegion 0 58.37 64.65 58.06 74.66 91.27 104.21 87.14 81.12 61.85 126.68 255.29 228.94 145.39 286.78 129.80 219.26 322.16 188.33 107.96 114.87 87.43 90.04 70.89 62 E18a_E19a KnownJunction 0 104.76 51.90 68.71 84.70 85.74 133.05 90.53 80.18 82.09 122.28 272.81 222.37 128.08 359.94 172.08 259.59 323.70 208.59 139.86 134.87 106.20 71.89 79.64 63 ER19a ExonRegion 0 79.81 125.46 56.41 86.16 127.17 89.26 89.89 76.83 47.58 96.28 141.88 160.81 149.37 173.51 109.71 130.59 165.63 82.78 65.57 78.14 35.16 71.35 41.09 64 E19_Da KnownBoundary 1 66.16 83.74 36.57 68.09 86.84 37.48 30.03 60.67 32.78 35.51 37.43 158.15 99.18 71.58 42.90 52.81 32.16 10.86 13.27 53.18 8.53 44.39 18.87 65 ER19b ExonRegion 0 22.27 46.78 22.15 49.11 50.46 29.16 27.20 31.73 19.06 30.09 30.74 43.85 32.98 24.51 25.83 18.91 23.87 10.07 10.42 32.52 3.88 14.11 5.30 66 E19_Db KnownBoundary 0 19.04 3.35 2.78 10.22 25.30 13.29 10.20 4.11 7.99 8.49 5.05 25.36 12.99 9.89 8.90 0.00 11.97 3.48 9.04 11.51 0.00 6.18 0.00 67 ER19c ExonRegion 0 5.24 2.76 0.95 7.44 12.57 12.26 5.07 1.23 4.49 3.76 5.47 20.96 5.80 7.05 7.25 0.12 6.30 0.46 6.41 9.94 0.00 4.52 5.91 68 IG21_AR17 ActiveIntergenicRegion 0 4.21 9.54 0.86 7.28 8.49 7.21 5.98 5.15 4.81 6.06 8.04 7.46 1.46 3.43 0.67 1.09 4.21 3.59 1.39 8.49 0.48 1.94 0.84 69 IG21_SR16 SilentIntergenicRegion 0 5.29 9.75 3.53 9.59 17.82 13.46 8.85 5.04 9.63 15.84 5.36 19.05 5.72 10.88 4.78 5.57 6.82 9.69 4.52 10.17 3.17 4.38 4.56 70 IG21_AR16 ActiveIntergenicRegion 0 4.19 6.57 6.72 8.42 10.14 10.52 5.33 6.12 6.32 11.81 4.51 7.19 5.71 10.14 1.95 4.48 9.63 12.58 6.76 8.81 2.47 2.16 5.44