Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	TM7SF3	Gene	0	63.24	85.05	51.94	59.68	77.62	88.87	56.59	52.42	55.08	70.54	171.44	202.53	272.56	285.45	271.12	220.61	187.35	114.76	55.45	67.51	97.31	78.26	70.07
2	343028	Transcript	0	75.88	101.41	95.88	81.73	118.37	156.62	96.72	76.39	98.32	115.25	328.07	379.28	554.86	577.89	518.66	432.49	350.91	226.72	108.93	123.74	173.60	147.82	133.02
3	ER1a	ExonRegion	1	5.18	8.65	9.01	5.70	7.97	30.37	11.62	9.43	14.86	23.99	69.41	11.09	12.19	118.63	77.77	103.13	91.07	54.50	23.97	25.80	70.81	27.03	32.34
4	E1a_E2a	KnownJunction	0	14.37	26.71	38.44	17.31	27.25	47.08	20.71	57.71	50.26	82.65	202.42	61.97	71.42	240.16	148.84	280.44	217.11	104.42	26.17	39.50	80.99	61.60	65.13
5	E1a_E3a	NovelJunction	0	0.00	3.03	6.06	1.86	0.00	5.00	0.00	0.00	1.53	5.43	13.69	5.40	6.82	18.95	0.00	34.69	4.02	33.83	0.00	11.38	12.17	5.51	0.00
6	E1a_E4a	NovelJunction	0	0.00	0.00	0.00	5.33	0.00	2.27	0.00	4.27	0.00	0.00	7.63	0.00	6.01	10.83	0.00	3.42	4.21	1.87	0.00	0.00	2.59	11.88	0.00
7	I1_AR2	ActiveIntronRegion	0	16.46	0.45	0.00	2.88	1.19	0.00	0.00	0.58	1.37	2.55	0.43	3.85	3.65	0.54	0.00	8.59	2.93	1.44	0.00	6.62	0.98	0.00	0.00
8	I1_SR2	SilentIntronRegion	0	14.00	7.02	7.79	13.32	5.29	4.08	12.83	7.60	4.15	4.22	8.10	20.35	23.72	12.73	15.20	18.72	16.68	9.89	9.49	15.59	2.60	0.42	4.89
9	I1_SR4	SilentIntronRegion	0	9.54	17.04	6.62	13.00	9.02	4.30	10.05	9.44	7.67	6.47	4.19	18.45	29.45	5.18	6.86	11.06	9.32	6.52	4.25	13.44	1.46	0.75	1.70
10	E2_Aa	NovelBoundary	0	10.08	3.35	6.68	8.82	8.66	12.83	5.83	20.99	15.36	5.80	4.69	37.21	61.85	11.54	0.00	4.27	12.06	10.74	9.04	16.75	0.00	0.00	0.00
11	ER2a	ExonRegion	0	25.11	58.30	55.54	42.38	71.68	149.84	74.45	67.69	78.52	96.44	308.94	225.52	301.43	446.21	260.44	302.50	321.91	139.53	70.80	70.25	136.45	118.12	80.92
12	E2_Da	NovelBoundary	0	13.56	19.08	2.90	8.06	4.07	2.90	25.75	8.87	1.71	4.86	0.00	11.85	61.03	8.95	20.27	7.52	8.32	8.71	8.56	5.75	2.78	0.00	3.16
13	E2a_E3a	KnownJunction	0	31.64	39.47	63.30	38.89	78.44	152.58	36.17	62.93	77.86	82.09	255.80	205.72	305.99	571.73	380.62	323.42	291.16	105.66	88.66	82.26	114.47	118.36	102.78
14	E3_Aa	NovelBoundary	0	3.78	10.06	6.68	18.65	12.99	8.69	19.70	5.63	4.40	0.00	22.53	6.30	26.78	35.32	8.90	12.56	32.07	19.61	7.44	18.02	2.72	3.12	11.95
15	ER3a	ExonRegion	0	29.93	34.41	72.89	68.66	43.64	70.34	39.91	78.62	110.60	116.79	322.72	371.79	454.34	559.17	383.04	361.75	356.30	169.19	93.24	110.76	168.08	163.77	122.83
16	E3a_E4a	KnownJunction	0	48.97	55.06	69.45	53.87	48.73	81.09	62.53	56.35	111.25	128.75	262.75	469.50	501.92	736.66	377.77	304.54	340.16	136.13	89.88	129.05	171.68	127.67	92.70
17	I3	Intron	0	18.81	9.85	3.43	10.07	11.28	5.33	7.39	3.96	2.73	3.50	11.68	14.48	32.01	30.91	21.26	35.40	26.33	10.63	3.81	11.64	2.38	2.37	2.84
18	I3_SR1	SilentIntronRegion	0	19.00	9.95	3.47	10.16	11.40	5.38	7.47	4.00	2.75	3.54	11.79	14.63	32.33	31.19	21.42	35.74	26.57	10.73	3.85	11.76	2.41	2.40	2.87
19	E4_Aa	NovelBoundary	0	10.45	9.60	8.57	19.68	11.88	34.53	13.69	6.12	8.28	4.00	9.95	18.76	35.22	44.50	21.39	64.43	30.67	19.48	4.42	2.62	0.00	5.33	0.00
20	ER4a	ExonRegion	0	36.47	99.61	77.52	100.72	124.50	190.84	105.17	80.58	116.90	141.55	386.10	397.06	501.25	704.28	488.49	513.61	406.56	256.85	116.20	138.88	210.65	162.77	157.73
21	E4a_E5a	KnownJunction	0	59.20	187.86	109.25	134.15	149.58	274.05	148.43	125.93	157.58	174.12	356.35	355.02	725.44	667.14	849.25	789.79	401.12	443.76	175.25	196.74	252.55	351.79	300.05
22	ER5a	ExonRegion	0	41.25	83.19	88.06	81.42	81.78	159.46	80.69	60.92	111.52	126.97	389.23	268.15	472.88	666.34	537.32	538.08	439.63	390.92	123.23	162.54	272.32	161.97	146.95
23	E5_Da	NovelBoundary	0	10.15	9.74	3.37	13.88	41.00	8.01	10.02	13.35	5.03	4.16	36.85	51.17	34.09	14.01	19.53	58.19	38.71	30.68	12.61	26.53	14.46	0.00	20.15
24	E5a_E6a	KnownJunction	0	38.90	68.54	124.39	85.57	91.85	172.29	81.79	62.15	123.15	124.75	327.98	239.63	427.24	620.76	727.98	533.71	301.82	430.66	139.58	184.53	242.17	203.79	189.42
25	E5a_E7a	NovelJunction	0	0.00	3.03	2.78	1.63	0.00	5.05	0.00	0.00	2.20	1.32	7.53	7.20	6.82	12.07	20.27	8.12	8.23	4.77	7.91	5.11	0.00	5.63	7.77
26	I5_AR1	ActiveIntronRegion	1	15.34	28.22	3.83	20.56	1.78	8.63	16.49	8.28	2.37	3.11	5.72	48.89	87.94	12.45	14.51	11.89	24.76	2.31	0.00	10.64	0.18	3.30	0.98
27	I5_AR2	ActiveIntronRegion	1	21.87	9.38	7.01	33.01	4.01	7.44	16.55	10.66	3.71	6.37	7.09	24.77	98.23	13.99	7.58	21.14	18.34	4.00	0.00	11.11	2.20	6.13	6.69
28	I5_AR3	ActiveIntronRegion	1	35.51	15.82	11.40	37.97	8.99	2.04	11.77	12.92	6.04	10.23	8.00	52.31	100.97	21.65	17.41	24.77	19.81	5.80	2.74	13.42	1.78	3.30	12.40
29	I5_AR4	ActiveIntronRegion	0	30.20	18.49	10.02	25.23	17.69	0.94	12.76	12.22	4.64	7.95	17.45	79.75	83.67	26.25	27.42	31.71	32.32	5.88	3.82	13.70	0.00	3.19	2.85
30	E6_Aa	NovelBoundary	0	20.00	15.79	3.49	33.90	32.34	10.73	21.33	12.77	4.86	11.12	9.21	67.67	88.14	37.61	45.49	30.16	43.57	14.05	3.48	5.94	3.15	7.65	0.00
31	ER6a	ExonRegion	0	58.63	85.90	109.44	84.44	104.46	164.15	86.71	76.49	125.95	133.42	398.49	303.35	762.58	709.74	584.52	507.33	485.64	365.23	127.24	155.65	262.93	156.04	153.65
32	E6_Da	NovelBoundary	1	16.89	5.33	5.38	25.01	7.98	12.89	8.26	10.35	7.06	14.59	16.79	40.21	173.04	47.85	32.63	46.83	55.35	8.00	21.84	2.81	13.78	0.00	3.67
33	E6a_E7a	KnownJunction	0	75.57	148.99	113.86	68.99	71.65	126.97	67.04	71.67	135.65	126.36	329.72	289.14	538.11	479.55	527.23	375.71	354.18	273.09	77.56	132.24	177.92	143.47	173.54
34	E6a_E8a	NovelJunction	0	6.74	5.79	3.67	3.23	0.00	7.95	4.50	0.00	1.27	2.47	4.69	6.30	18.83	7.77	5.44	15.98	18.42	11.69	9.60	14.38	3.03	5.20	4.35
35	I6	Intron	0	6.80	7.09	2.36	11.22	13.02	8.48	11.13	6.81	5.69	5.39	14.40	26.56	68.30	20.09	16.20	21.25	23.89	6.71	3.64	9.71	3.18	2.75	3.88
36	I6_AR1	ActiveIntronRegion	0	7.88	7.90	3.48	20.17	15.47	6.93	12.18	9.78	8.36	8.64	22.28	21.05	44.17	26.89	18.41	32.64	38.05	13.34	5.92	13.26	5.14	2.66	5.01
37	I6_SR2	SilentIntronRegion	0	7.81	7.89	2.42	9.81	13.51	10.93	13.29	7.22	5.90	5.23	12.77	35.61	93.34	20.46	18.07	19.78	20.01	4.88	3.25	9.76	2.43	3.24	4.40
38	ER7a	ExonRegion	0	69.87	106.63	102.30	78.11	145.17	163.86	98.19	69.99	106.75	123.48	375.80	499.88	730.19	667.01	518.89	459.59	394.36	261.72	104.31	119.64	172.12	152.07	151.52
39	E7a_E8a	KnownJunction	0	93.79	127.54	118.33	75.95	199.75	206.70	135.09	84.12	129.95	122.76	359.04	643.56	1049.93	865.92	615.86	512.09	417.48	233.84	183.06	83.60	151.11	189.40	145.89
40	I7_AR1	ActiveIntronRegion	0	4.22	8.96	3.63	10.66	5.15	4.98	8.61	2.37	7.03	3.82	7.85	37.60	56.94	11.87	8.74	12.63	7.18	3.56	0.81	6.51	1.10	4.06	2.75
41	E8_Aa	NovelBoundary	0	10.15	17.23	10.14	21.24	4.33	8.29	18.72	10.47	8.94	2.69	11.16	38.56	50.00	17.42	5.32	11.79	13.74	1.82	0.00	19.94	3.15	0.00	3.76
42	ER8a	ExonRegion	0	85.44	133.41	109.91	73.24	166.92	223.72	138.41	88.54	100.27	127.01	389.40	530.07	880.51	722.07	522.62	488.38	444.77	197.82	112.94	104.81	157.47	154.46	119.10
43	E8_Da	NovelBoundary	0	10.74	19.80	4.58	22.94	3.90	2.90	27.07	8.38	12.79	9.43	29.06	60.02	65.26	21.25	0.00	11.19	13.00	8.21	18.45	28.57	0.00	11.63	11.61
44	E8a_E9a	KnownJunction	0	119.58	135.24	84.00	70.95	120.03	168.31	141.85	74.14	78.82	100.52	398.79	477.31	725.93	564.37	407.44	388.02	356.61	140.36	56.47	91.40	140.61	78.50	62.66
45	E8a_E10a	NovelJunction	0	9.78	18.88	23.80	17.25	45.16	60.76	39.13	18.81	32.35	27.32	6.63	25.06	6.17	2.41	9.64	3.85	0.00	24.75	14.02	26.46	2.90	32.45	20.83
46	E8a_E11a	NovelJunction	0	3.70	2.50	4.94	2.06	4.33	0.00	2.25	2.34	1.68	1.67	2.68	6.90	14.45	2.47	17.80	4.36	0.00	0.00	4.52	0.00	11.06	20.45	7.26
47	I8	Intron	0	5.66	12.04	5.77	16.47	11.50	15.61	11.59	9.40	11.34	6.65	23.66	37.27	55.21	22.12	11.46	32.53	23.55	19.16	6.72	16.73	6.43	8.45	4.52
48	I8_AR1	ActiveIntronRegion	0	5.68	12.07	5.79	16.52	11.54	15.66	11.63	9.43	11.38	6.67	23.74	37.39	55.39	22.19	11.49	32.64	23.62	19.22	6.74	16.79	6.45	8.47	4.54
49	ER9a	ExonRegion	0	76.97	101.71	96.47	88.53	73.87	118.12	81.04	57.24	78.79	95.79	319.26	567.56	635.67	518.47	512.48	404.68	377.58	145.95	73.43	113.17	140.01	107.43	106.47
50	E9_Da	NovelBoundary	1	21.56	2.76	8.10	19.24	7.56	16.01	12.28	17.58	18.46	5.24	31.53	41.86	58.92	129.50	25.34	78.95	68.07	35.36	22.31	30.49	16.93	3.00	11.78
51	E9a_E10a	KnownJunction	0	80.83	98.54	113.33	96.99	133.53	176.43	137.35	73.19	67.16	108.95	400.47	533.72	812.45	606.04	720.44	355.55	367.65	159.47	113.79	150.91	201.83	119.96	104.23
52	E9a_E11a	NovelJunction	0	0.00	0.00	0.00	3.00	0.00	0.00	2.25	0.00	2.60	0.00	0.00	7.65	18.51	2.47	0.00	7.01	9.54	1.91	0.00	0.00	3.15	5.94	4.35
53	I9	Intron	1	2.69	5.68	4.17	15.97	12.22	12.56	15.12	5.88	14.91	5.20	23.98	26.06	53.97	63.53	20.91	70.89	41.06	27.73	8.08	16.72	11.74	3.17	11.92
54	I9_SR1	SilentIntronRegion	1	2.74	5.98	4.47	17.16	13.21	13.32	16.33	6.24	16.01	5.57	25.62	27.77	58.10	67.36	22.38	75.28	43.87	29.64	8.63	17.95	12.59	3.30	12.73
55	Ix	Intron	0	33.38	28.82	10.23	16.90	30.64	18.05	28.53	12.02	14.68	9.14	36.57	53.49	90.67	52.50	32.47	61.52	43.11	18.41	9.46	17.50	10.47	6.54	11.45
56	Ix_AR1	ActiveIntronRegion	0	35.68	30.81	11.02	18.20	32.54	19.44	30.44	12.95	15.82	9.84	38.82	56.45	95.47	55.64	34.45	66.06	46.02	19.83	10.19	18.85	11.19	6.89	12.21
57	E10_Aa	NovelBoundary	0	36.08	44.14	26.43	41.32	86.16	38.95	48.58	22.47	26.74	15.20	46.17	87.93	120.93	48.74	31.15	61.01	41.14	8.50	13.65	10.61	11.31	0.00	20.40
58	ER10a	ExonRegion	0	116.04	138.28	140.72	136.93	212.97	225.28	148.88	102.40	105.80	118.37	440.11	614.30	780.22	662.56	721.70	531.62	380.85	249.20	144.90	164.42	180.82	182.50	156.69
59	E10_Da	NovelBoundary	0	30.52	46.24	18.36	32.53	44.82	31.18	29.01	17.29	25.64	7.01	43.43	63.77	156.48	17.60	0.00	55.46	16.46	3.65	3.95	11.51	2.53	5.82	0.00
60	E10a_E11a	KnownJunction	0	110.39	133.00	149.76	132.28	221.73	172.85	162.61	90.98	99.85	133.07	339.66	576.34	567.66	581.20	696.09	554.64	326.88	274.38	141.27	191.94	185.52	184.93	151.09
61	Ix	Intron	0	48.90	28.01	8.60	21.60	25.42	22.38	24.82	10.10	14.28	11.32	37.75	55.71	81.92	43.12	32.33	45.61	36.55	11.94	6.94	15.02	7.88	7.81	11.78
62	Ix_AR1	ActiveIntronRegion	0	49.06	28.10	8.63	21.68	25.50	22.46	24.90	10.14	14.33	11.36	37.87	55.90	82.18	43.26	32.44	45.76	36.67	11.98	6.96	15.07	7.90	7.84	11.81
63	E11_Aa	NovelBoundary	0	86.98	41.64	18.04	20.58	62.73	24.19	31.53	17.70	26.48	13.38	38.90	80.73	74.18	50.80	79.24	63.49	102.10	49.37	26.54	28.70	17.98	9.00	46.35
64	ER11a	ExonRegion	0	167.36	166.15	160.85	148.25	181.74	183.35	137.03	114.48	116.78	145.23	375.37	485.01	567.49	616.60	765.47	524.43	426.30	267.10	169.82	166.41	218.19	173.21	170.29
65	E11a_E12a	KnownJunction	0	292.35	206.87	165.96	145.60	297.03	284.50	186.37	147.21	128.90	168.08	454.27	475.96	792.32	832.13	940.85	682.30	484.15	361.93	224.10	192.14	234.94	214.26	232.61
66	ER12a	ExonRegion	0	67.50	88.29	32.46	50.91	68.16	60.12	42.59	44.27	34.12	49.69	83.61	121.71	144.61	134.72	163.97	111.94	87.58	52.77	29.49	39.48	49.19	46.67	40.78
67	IG6	Intergenic	0	20.24	12.52	14.56	30.38	39.84	30.42	19.23	18.92	21.13	20.67	9.98	40.84	30.84	20.95	23.50	11.85	6.08	5.86	5.63	9.41	1.31	25.46	4.29
68	IG6_AR2	ActiveIntergenicRegion	0	2.82	3.98	6.21	8.29	12.77	22.41	7.31	3.31	17.62	15.61	1.47	9.53	24.94	9.60	5.06	2.56	2.51	6.05	3.90	4.67	0.07	3.41	1.02
69	IG6_AR1	ActiveIntergenicRegion	0	75.99	38.31	47.33	107.15	139.83	81.63	64.64	67.39	51.95	66.59	38.76	153.14	98.17	71.60	86.67	41.51	18.59	5.05	12.65	24.67	3.14	98.29	15.44