Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RECQL Gene 0 65.06 36.44 30.43 30.60 92.62 76.47 85.14 45.60 38.38 50.82 227.03 227.02 139.37 208.27 83.96 189.56 213.10 31.94 27.90 52.24 111.43 149.28 84.70 2 396093 Transcript 0 10.23 4.41 2.86 4.77 11.15 16.20 7.28 6.91 8.23 9.18 57.02 28.14 28.92 56.03 10.64 54.49 51.71 10.41 7.43 12.41 34.16 42.02 27.41 3 444129 Transcript 1 4.23 0.00 9.39 6.51 7.14 6.11 2.50 10.56 18.94 19.69 101.26 3.61 24.23 167.01 30.46 130.11 166.70 52.04 30.44 38.89 101.62 61.12 98.54 4 421138 Transcript 1 3.56 0.00 4.97 5.76 0.00 0.00 2.03 7.56 10.13 9.62 162.46 25.96 6.82 106.95 13.60 101.08 208.13 8.95 16.57 23.33 88.77 21.25 47.80 5 314748 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.51 0.00 0.00 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.50 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 1 30.24 13.32 8.99 8.18 55.46 70.80 64.46 16.34 13.71 20.95 129.99 11.44 14.44 166.10 27.83 184.68 202.15 44.73 20.45 30.55 135.93 56.07 89.65 8 E2_Da KnownBoundary 1 0.00 0.00 6.62 4.10 7.98 0.00 4.20 3.70 11.11 10.80 102.39 6.30 33.76 98.83 18.54 59.47 171.01 6.63 16.00 41.42 91.06 48.19 62.14 9 E2a_E2c KnownJunction 1 3.56 0.00 4.97 5.76 0.00 0.00 2.03 7.56 10.13 9.62 162.46 25.96 6.82 106.95 13.60 101.08 208.13 8.95 16.57 23.33 88.77 21.25 47.80 10 E2a_E3a NovelJunction 1 0.00 0.00 1.66 1.56 0.00 0.00 1.90 6.20 4.86 7.49 34.85 0.00 0.00 44.79 0.00 10.94 8.42 4.77 0.00 11.57 15.32 8.51 8.71 11 E2_Ab KnownBoundary 0 7.56 0.00 7.24 5.59 4.33 10.45 0.00 10.06 14.32 14.59 50.54 0.00 13.15 135.62 28.56 128.77 83.22 54.72 32.47 27.36 62.02 40.54 93.56 12 ER2b ExonRegion 1 4.23 0.00 9.39 6.51 7.14 6.11 2.50 10.56 18.94 19.69 101.26 3.61 24.23 167.01 30.46 130.11 166.70 52.04 30.44 38.89 101.62 61.12 98.54 13 ER2c ExonRegion 0 13.15 9.70 9.70 6.23 48.40 80.41 45.90 11.88 27.93 27.37 111.51 35.93 41.17 148.90 31.64 200.49 135.12 59.10 32.42 31.08 134.39 92.37 107.66 14 E2_Ac KnownBoundary 1 28.15 27.17 13.75 4.63 72.50 166.44 80.16 11.13 32.73 33.93 116.03 48.77 48.86 141.09 18.79 160.13 151.00 31.46 30.87 23.71 130.97 59.95 106.79 15 ER2d ExonRegion 0 30.35 29.67 15.65 4.65 51.14 87.06 51.48 33.23 42.36 45.09 307.24 112.07 105.53 309.99 60.20 292.01 315.54 47.03 55.02 45.55 264.50 139.88 141.09 16 E2b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.03 0.00 0.00 17 E2c_E3a KnownJunction 0 33.27 19.54 15.46 4.79 52.63 49.40 56.70 40.83 46.76 43.14 293.07 124.69 116.55 309.55 69.60 220.28 302.94 48.50 57.98 59.76 298.32 168.70 144.43 18 ER2e ExonRegion 1 27.51 26.44 12.25 5.45 56.19 49.51 54.28 32.84 43.23 42.44 318.93 108.24 103.18 324.82 60.93 276.41 306.98 49.89 70.08 51.06 295.30 166.68 143.90 19 ER3a ExonRegion 1 45.14 27.54 16.43 21.85 66.94 69.05 44.49 41.28 48.84 51.31 342.92 137.55 115.79 369.47 69.58 346.37 327.55 55.22 60.99 74.71 267.15 234.89 177.26 20 E3a_E4b KnownJunction 0 90.16 44.60 21.26 35.13 78.78 85.06 57.10 44.36 49.39 63.07 362.78 194.01 190.41 371.77 75.16 326.15 351.66 54.14 47.44 81.81 208.44 263.37 176.27 21 ER4a ExonRegion 0 20.46 8.81 5.72 9.54 22.30 32.40 14.56 13.83 16.47 18.35 114.04 56.28 57.84 112.06 21.28 108.98 103.43 20.33 14.87 24.82 68.31 84.04 54.82 22 ER4b ExonRegion 1 58.66 28.44 22.17 21.92 126.83 152.58 145.83 48.33 53.56 59.35 365.44 313.51 192.39 307.61 54.06 256.75 326.47 48.95 31.00 62.99 142.41 218.18 131.38 23 E4_Da KnownBoundary 0 78.98 38.94 18.10 43.62 90.75 129.75 167.42 51.59 53.53 66.43 422.37 365.37 216.87 417.27 106.81 238.23 410.00 33.91 70.78 85.59 148.27 261.04 134.70 24 E4a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER4c ExonRegion 0 50.55 35.86 16.17 34.73 70.34 89.15 107.14 43.44 46.96 66.85 332.16 397.40 204.65 320.42 85.70 257.49 339.29 39.69 34.49 67.43 130.36 257.11 109.05 26 E4b_E5a KnownJunction 0 55.86 45.98 22.80 29.77 95.76 86.83 109.44 44.98 45.17 73.68 331.87 572.14 357.61 307.20 97.04 268.90 287.33 49.83 12.80 75.68 109.78 262.26 75.03 27 ER5a ExonRegion 0 64.78 34.99 28.26 32.29 112.23 75.17 112.25 74.09 49.66 78.93 479.78 506.82 251.46 312.73 79.87 227.55 407.46 38.24 21.07 97.63 151.35 284.28 101.75 28 E5_Ab KnownBoundary 1 87.94 41.44 43.26 31.13 115.03 95.12 109.44 54.18 50.98 90.79 346.88 564.63 290.08 384.60 61.93 250.70 242.08 48.21 44.24 93.77 112.56 217.20 151.95 29 ER5b ExonRegion 0 78.23 34.90 46.01 44.26 98.37 100.29 107.31 62.13 51.47 94.86 463.61 569.68 252.58 311.24 105.76 278.19 375.64 50.36 32.84 83.79 119.48 281.58 119.28 30 E5a_E6a KnownJunction 0 127.65 49.27 45.00 57.14 170.20 160.31 119.55 80.09 48.41 97.00 469.01 526.82 209.73 305.79 129.18 243.61 424.22 43.69 25.69 94.47 126.58 324.60 86.81 31 ER6a ExonRegion 0 67.12 51.64 35.74 43.70 119.43 103.38 119.33 61.92 60.83 75.14 432.45 452.33 240.73 306.25 107.56 236.99 353.84 34.69 29.32 89.24 99.13 289.24 94.27 32 E6a_E7a KnownJunction 0 79.42 55.98 36.96 66.13 120.54 95.29 136.24 57.83 68.98 84.72 417.90 404.23 265.89 365.71 90.61 328.55 355.21 31.71 46.40 81.56 90.38 266.18 151.18 33 ER7a ExonRegion 0 81.61 47.31 44.29 59.37 160.21 122.96 148.70 71.95 62.83 86.70 473.95 508.94 289.65 387.29 127.25 368.01 379.02 55.17 59.32 89.72 194.45 291.36 142.07 34 E7a_E8a KnownJunction 0 74.38 39.20 52.25 59.77 156.45 108.40 133.99 85.35 54.11 83.78 511.87 270.84 287.32 365.12 166.51 358.62 434.50 59.07 46.87 73.76 233.02 249.53 171.07 35 I7_SR1 SilentIntronRegion 0 10.78 5.14 2.70 3.41 7.48 8.72 11.10 13.88 12.08 14.67 14.78 28.97 28.96 14.59 4.11 21.88 21.29 9.92 5.14 17.57 8.04 20.19 11.21 36 I7_AR1 ActiveIntronRegion 0 7.22 5.96 4.35 2.92 10.75 9.40 13.22 9.98 10.14 12.01 12.18 21.20 42.18 21.44 4.05 25.14 21.11 4.64 3.87 12.40 8.28 14.42 8.35 37 I7_AR2 ActiveIntronRegion 1 2.12 5.01 5.09 3.67 5.76 8.60 20.06 11.97 11.21 7.15 13.23 0.00 44.01 10.49 1.56 29.95 15.49 1.85 0.49 7.86 0.00 11.06 10.62 38 ER8a ExonRegion 0 78.39 62.87 40.55 39.86 167.31 108.05 139.69 83.92 55.57 93.87 394.43 491.17 267.61 385.02 142.96 350.94 360.83 55.79 45.66 89.67 226.76 237.40 144.69 39 E8_Da NovelBoundary 0 14.45 15.79 4.64 3.43 39.98 7.72 18.42 30.76 15.13 14.21 4.74 12.45 14.93 9.48 0.00 8.46 4.77 2.57 0.00 9.65 2.72 17.02 7.34 40 E8a_E9a KnownJunction 0 127.21 56.17 41.13 28.00 183.96 123.22 175.28 70.40 33.16 94.58 408.05 396.88 190.90 402.67 163.55 370.42 279.29 47.34 39.25 86.80 177.80 222.95 147.00 41 I8_AR1 ActiveIntronRegion 0 13.46 13.14 7.94 6.99 25.17 10.10 15.97 11.54 14.52 18.28 5.82 20.78 25.51 6.78 2.37 11.38 7.32 2.19 3.41 8.52 4.23 19.62 3.22 42 E9_Aa NovelBoundary 0 17.26 17.83 7.07 11.39 47.28 40.49 24.82 15.61 18.46 15.23 10.00 25.21 0.00 16.66 0.00 8.72 3.83 9.00 0.00 6.26 8.22 17.27 0.00 43 ER9a ExonRegion 0 153.86 65.47 43.46 44.26 227.70 163.10 187.65 78.18 55.76 100.07 400.82 466.90 264.87 400.90 152.03 358.76 388.26 61.16 47.82 101.09 159.88 262.29 164.74 44 E9a_E10a KnownJunction 0 167.36 58.48 40.18 47.68 238.46 137.88 208.05 72.82 45.51 109.87 417.47 373.62 182.78 301.78 151.31 331.96 356.71 49.33 49.88 96.64 125.16 256.94 134.53 45 ER10a ExonRegion 0 117.87 60.00 57.05 56.34 192.24 126.86 167.14 86.12 68.60 97.46 434.29 441.34 280.39 383.10 161.11 331.14 356.74 51.43 48.81 97.79 188.88 269.31 144.03 46 E10a_E11a KnownJunction 0 127.06 53.48 62.33 61.30 217.32 115.16 237.99 94.63 82.41 103.98 477.59 534.77 382.93 392.96 148.09 360.33 382.42 41.04 26.92 120.42 214.92 294.35 157.32 47 ER11a ExonRegion 0 133.56 57.41 69.18 75.47 208.73 142.48 184.00 92.11 93.09 103.97 457.52 407.63 293.88 398.83 170.12 358.47 443.16 50.52 47.59 106.09 211.65 289.80 151.56 48 E11a_E12a KnownJunction 0 226.11 133.53 69.48 86.77 257.22 103.18 259.77 95.83 98.00 115.18 382.36 392.68 214.43 458.12 218.68 326.32 475.36 44.36 39.53 145.92 221.10 328.21 156.21 49 E12_Aa NovelBoundary 0 31.86 0.00 10.56 3.73 6.79 10.39 11.61 6.04 9.29 6.10 16.90 6.30 0.00 13.95 4.45 19.99 38.34 2.49 4.24 8.50 0.00 8.70 11.87 50 ER12a ExonRegion 0 176.97 81.67 83.55 85.03 216.47 128.13 176.50 94.75 93.53 110.75 453.34 372.49 304.95 406.04 225.48 320.90 456.85 35.39 46.13 120.92 185.46 312.14 134.77 51 E12a_E13a KnownJunction 0 143.43 99.85 97.01 107.08 199.66 160.65 188.13 97.76 105.44 128.27 451.27 337.01 506.46 397.20 266.77 347.43 464.61 37.89 54.78 139.85 233.46 331.64 134.19 52 ER13a ExonRegion 0 164.67 67.22 107.31 87.92 225.23 159.54 196.05 114.36 88.15 110.20 467.99 465.98 406.55 449.05 237.18 399.69 425.71 57.88 72.05 133.14 193.09 312.46 181.50 53 E13a_E14a KnownJunction 0 203.37 57.49 130.30 97.62 298.64 205.68 301.01 130.08 78.99 105.11 551.77 530.12 298.03 551.71 280.98 440.91 409.54 53.23 121.98 148.42 205.35 388.65 236.63 54 ER14a ExonRegion 0 170.94 98.33 102.95 82.03 239.25 178.33 181.72 130.44 91.62 106.73 449.68 509.26 348.83 434.73 274.95 400.82 437.32 63.03 75.59 119.95 256.67 340.63 168.90 55 E14a_E15a KnownJunction 0 188.03 79.13 147.19 99.15 295.93 164.45 230.66 174.81 88.45 177.10 480.12 594.19 227.10 494.20 325.73 491.75 476.11 50.24 90.17 134.35 287.02 430.90 222.54 56 E15_Aa NovelBoundary 1 172.70 98.47 86.16 110.68 139.30 97.50 73.80 79.15 42.68 55.55 50.59 112.84 151.45 44.85 47.35 16.58 36.65 6.26 25.32 39.18 14.58 88.54 10.76 57 ER15a ExonRegion 0 127.98 73.26 76.55 69.17 158.18 113.30 144.36 101.25 79.74 108.56 273.03 356.45 172.85 281.06 188.80 279.77 251.63 42.06 49.96 71.90 143.05 210.69 129.44 58 E15_Da NovelBoundary 1 66.46 80.58 79.62 140.11 157.73 108.29 87.40 81.61 55.64 61.84 60.49 140.30 118.99 48.15 64.28 40.25 37.96 5.93 26.92 32.28 8.28 46.05 8.28 59 E15a_E16a KnownJunction 0 224.93 198.98 76.40 75.75 176.74 99.83 147.77 113.61 64.90 135.12 406.63 435.74 149.34 335.45 300.27 301.63 300.33 44.02 25.22 65.07 162.17 306.78 184.38 60 E16_Aa NovelBoundary 1 138.25 92.48 25.87 37.76 62.48 63.09 48.23 16.02 12.18 15.28 12.69 120.34 58.76 28.31 28.18 16.15 31.60 0.00 9.04 29.47 3.15 46.97 20.15 61 ER16a ExonRegion 1 53.43 37.70 8.79 11.93 19.04 28.70 27.76 14.67 10.00 16.67 25.60 63.98 24.84 35.30 24.12 32.29 24.45 6.06 2.71 7.61 13.34 28.82 17.70 62 E16_Da KnownBoundary 1 933.50 568.45 919.75 1217.93 442.70 154.91 350.12 1250.70 1005.11 951.53 106.45 32.71 13.47 23.60 29.17 148.00 139.41 929.47 162.26 196.35 78.70 87.32 158.26 63 ER16b ExonRegion 0 1.26 0.48 0.54 1.94 0.47 1.63 1.10 1.38 1.03 0.91 1.25 2.97 1.36 1.22 0.28 0.88 0.99 0.00 0.00 0.89 0.39 1.36 0.52